RNA–Protein interactions for RNA: ENST00000283629.7

UBP1-202, Transcript of upstream binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBP1, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-202ENST00000283629 Q8N1X5 172 aa11.59□□□□□ -0.55
UBP1-202ENST00000283629 Q96NJ1 140 aa11.59□□□□□ -0.55
UBP1-202ENST00000283629 KRTAP29-1A8MX34 341 aaPredicted RBP11.57□□□□□ -0.56
UBP1-202ENST00000283629 APLNQ9ULZ1 77 aa11.56□□□□□ -0.56
UBP1-202ENST00000283629 ADM2Q7Z4H4 148 aa11.56□□□□□ -0.56
UBP1-202ENST00000283629 A6NN06 94 aa11.55□□□□□ -0.56
UBP1-202ENST00000283629 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
UBP1-202ENST00000283629 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
UBP1-202ENST00000283629 PSORS1C2Q9UIG4 136 aa11.53□□□□□ -0.56
UBP1-202ENST00000283629 LCE6AA0A183 80 aa11.52□□□□□ -0.57
UBP1-202ENST00000283629 AKAP9Q99996 3911 aa11.52□□□□□ -0.57
UBP1-202ENST00000283629 ZNF861PO60384 105 aa11.5□□□□□ -0.57
UBP1-202ENST00000283629 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
UBP1-202ENST00000283629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.42□□□□□ -0.58
UBP1-202ENST00000283629 A0A087WTM6 91 aa11.41□□□□□ -0.58
UBP1-202ENST00000283629 KRTAP7-1Q8IUC3 87 aa11.39□□□□□ -0.59
UBP1-202ENST00000283629 A0A087X002 238 aa11.37□□□□□ -0.59
UBP1-202ENST00000283629 NOTCH2NLQ7Z3S9 236 aa11.37□□□□□ -0.59
UBP1-202ENST00000283629 PANO1I0J062 215 aa11.36□□□□□ -0.59
UBP1-202ENST00000283629 TYMSOSQ8TAI1 123 aa11.36□□□□□ -0.59
UBP1-202ENST00000283629 A0A0D9SG42 100 aa11.34□□□□□ -0.59
UBP1-202ENST00000283629 TGP01266 2768 aa11.34□□□□□ -0.59
UBP1-202ENST00000283629 SPRR1BP22528 89 aa11.33□□□□□ -0.6
UBP1-202ENST00000283629 Q5W150 140 aa11.32□□□□□ -0.6
UBP1-202ENST00000283629 KRTAP11-1Q8IUC1 163 aa11.31□□□□□ -0.6
UBP1-202ENST00000283629 PLA2G1BP04054 148 aaKnown RBP11.3□□□□□ -0.6
UBP1-202ENST00000283629 C9orf92A6NGG3 77 aa11.29□□□□□ -0.6
UBP1-202ENST00000283629 Q6ZR54 194 aa11.27□□□□□ -0.6
UBP1-202ENST00000283629 IGLV7-43P04211 117 aa11.27□□□□□ -0.61
UBP1-202ENST00000283629 A0A1B0GU33 70 aa11.24□□□□□ -0.61
UBP1-202ENST00000283629 SRRM2Q9UQ35 2752 aaKnown RBP11.24□□□□□ -0.61
UBP1-202ENST00000283629 CSMD3Q7Z407 3707 aa11.2□□□□□ -0.62
UBP1-202ENST00000283629 WWC2-AS2Q96NR7 200 aa11.19□□□□□ -0.62
UBP1-202ENST00000283629 DMAC1Q96GE9 116 aa11.18□□□□□ -0.62
UBP1-202ENST00000283629 SPATA8Q6RVD6 105 aa11.13□□□□□ -0.63
UBP1-202ENST00000283629 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.64
UBP1-202ENST00000283629 LINC00304Q8N9R0 145 aa11.02□□□□□ -0.65
UBP1-202ENST00000283629 Q6ZRN7 208 aaPredicted RBP11□□□□□ -0.65
UBP1-202ENST00000283629 COL7A1Q02388 2944 aa10.99□□□□□ -0.65
UBP1-202ENST00000283629 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
UBP1-202ENST00000283629 ASB16-AS1Q495Z4 193 aa10.94□□□□□ -0.66
UBP1-202ENST00000283629 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
UBP1-202ENST00000283629 FBN3Q75N90 2809 aa10.89□□□□□ -0.67
UBP1-202ENST00000283629 LINC00483Q53H64 154 aa10.88□□□□□ -0.67
UBP1-202ENST00000283629 KRTAP25-1Q3LHN0 102 aa10.86□□□□□ -0.67
UBP1-202ENST00000283629 KRTAP10-1P60331 282 aa10.84□□□□□ -0.67
UBP1-202ENST00000283629 ROMO1P60602 79 aa10.8□□□□□ -0.68
UBP1-202ENST00000283629 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
UBP1-202ENST00000283629 KRTAP13-1Q8IUC0 172 aa10.77□□□□□ -0.69
UBP1-202ENST00000283629 MEGF8Q7Z7M0 2845 aa10.73□□□□□ -0.69
UBP1-202ENST00000283629 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
UBP1-202ENST00000283629 NDUFAF8A1L188 74 aa10.7□□□□□ -0.7
UBP1-202ENST00000283629 HUWE1Q7Z6Z7 4374 aaKnown RBP10.68□□□□□ -0.7
UBP1-202ENST00000283629 A8MUU9 505 aa10.66□□□□□ -0.7
UBP1-202ENST00000283629 ANK2Q01484 3957 aa10.63□□□□□ -0.71
UBP1-202ENST00000283629 LUZP6Q538Z0 58 aa10.59□□□□□ -0.71
UBP1-202ENST00000283629 Q6ZSA8 131 aa10.57□□□□□ -0.72
UBP1-202ENST00000283629 DNAH10Q8IVF4 4471 aa10.54□□□□□ -0.72
UBP1-202ENST00000283629 KRTAP13-2Q52LG2 175 aa10.54□□□□□ -0.72
UBP1-202ENST00000283629 KRTAP16-1A8MUX0 517 aa10.52□□□□□ -0.73
UBP1-202ENST00000283629 H0YAA0 97 aa10.47□□□□□ -0.73
UBP1-202ENST00000283629 COX6B2Q6YFQ2 88 aa10.46□□□□□ -0.74
UBP1-202ENST00000283629 C10orf95Q9H7T3 257 aa10.43□□□□□ -0.74
UBP1-202ENST00000283629 S4R3F8 94 aa10.42□□□□□ -0.74
UBP1-202ENST00000283629 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
UBP1-202ENST00000283629 DNAH9Q9NYC9 4486 aa10.36□□□□□ -0.75
UBP1-202ENST00000283629 LYSTQ99698 3801 aa10.34□□□□□ -0.75
UBP1-202ENST00000283629 CAMK2N1Q7Z7J9 78 aa10.29□□□□□ -0.76
UBP1-202ENST00000283629 A0A0A0MQY5 61 aa10.29□□□□□ -0.76
UBP1-202ENST00000283629 KRTAP13-3Q3SY46 172 aa10.28□□□□□ -0.76
UBP1-202ENST00000283629 C20orf166-AS1Q96NR2 134 aa10.26□□□□□ -0.77
UBP1-202ENST00000283629 KRTAP1-4P0C5Y4 121 aa10.25□□□□□ -0.77
UBP1-202ENST00000283629 R4GN34 69 aa10.24□□□□□ -0.77
UBP1-202ENST00000283629 M0QZ58 72 aa10.17□□□□□ -0.78
UBP1-202ENST00000283629 STARD9Q9P2P6 4700 aa10.14□□□□□ -0.79
UBP1-202ENST00000283629 DNHD1Q96M86 4753 aa10.12□□□□□ -0.79
UBP1-202ENST00000283629 PRKDCP78527 4128 aaKnown RBP10.12□□□□□ -0.79
UBP1-202ENST00000283629 Q5VSD8 79 aa10.12□□□□□ -0.79
UBP1-202ENST00000283629 CMYA5Q8N3K9 4069 aa10.11□□□□□ -0.79
UBP1-202ENST00000283629 DNAH1Q9P2D7 4330 aa10.1□□□□□ -0.79
UBP1-202ENST00000283629 DNAH11Q96DT5 4516 aa10.04□□□□□ -0.8
UBP1-202ENST00000283629 KMT2AQ03164 3969 aa10.03□□□□□ -0.8
UBP1-202ENST00000283629 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
UBP1-202ENST00000283629 DNAH3Q8TD57 4116 aa9.94□□□□□ -0.82
UBP1-202ENST00000283629 P0C880 135 aa9.93□□□□□ -0.82
UBP1-202ENST00000283629 J3QL48 77 aa9.88□□□□□ -0.83
UBP1-202ENST00000283629 VPS13DQ5THJ4 4388 aa9.87□□□□□ -0.83
UBP1-202ENST00000283629 TPRXLQ17RH7 258 aa9.84□□□□□ -0.83
UBP1-202ENST00000283629 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
UBP1-202ENST00000283629 KRTAP21-3Q3LHN1 58 aa9.81□□□□□ -0.84
UBP1-202ENST00000283629 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
UBP1-202ENST00000283629 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
UBP1-202ENST00000283629 PLAC4Q8WY50 150 aa9.77□□□□□ -0.84
UBP1-202ENST00000283629 LRP1BQ9NZR2 4599 aa9.76□□□□□ -0.85
UBP1-202ENST00000283629 DNAH5Q8TE73 4624 aa9.74□□□□□ -0.85
UBP1-202ENST00000283629 KRTAP3-1Q9BYR8 98 aa9.72□□□□□ -0.85
UBP1-202ENST00000283629 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
UBP1-202ENST00000283629 KRTAP10-8P60410 259 aa9.71□□□□□ -0.85
UBP1-202ENST00000283629 A0A1B0GVY2 172 aa9.7□□□□□ -0.86
UBP1-202ENST00000283629 FAT1Q14517 4588 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms