RNA–Protein interactions for RNA: ENST00000282928.4

ZIC1-201, Transcript of Zic family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC1, Length 5,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-201ENST00000282928 M0QZ58 72 aa10.25□□□□□ -0.77
ZIC1-201ENST00000282928 NBEAQ8NFP9 2946 aa10.24□□□□□ -0.77
ZIC1-201ENST00000282928 KALRNO60229 2985 aa10.23□□□□□ -0.77
ZIC1-201ENST00000282928 DMXL1Q9Y485 3027 aa10.21□□□□□ -0.78
ZIC1-201ENST00000282928 ZZEF1O43149 2961 aa10.2□□□□□ -0.78
ZIC1-201ENST00000282928 Q5VV11 94 aa10.2□□□□□ -0.78
ZIC1-201ENST00000282928 NOTCH2NLQ7Z3S9 236 aa10.18□□□□□ -0.78
ZIC1-201ENST00000282928 FREM2Q5SZK8 3169 aa10.17□□□□□ -0.78
ZIC1-201ENST00000282928 A8MUU9 505 aa10.16□□□□□ -0.78
ZIC1-201ENST00000282928 PRAC1Q96KF2 57 aa10.16□□□□□ -0.78
ZIC1-201ENST00000282928 ADM2Q7Z4H4 148 aa10.15□□□□□ -0.78
ZIC1-201ENST00000282928 C20orf166-AS1Q96NR2 134 aa10.15□□□□□ -0.79
ZIC1-201ENST00000282928 ROMO1P60602 79 aa10.14□□□□□ -0.79
ZIC1-201ENST00000282928 LRBAP50851 2863 aa10.1□□□□□ -0.79
ZIC1-201ENST00000282928 NIPBLQ6KC79 2804 aaeCLIP10.08□□□□□ -0.8
ZIC1-201ENST00000282928 CRYBG3Q68DQ2 2970 aa10.03□□□□□ -0.8
ZIC1-201ENST00000282928 ZANQ9Y493 2812 aa10.01□□□□□ -0.81
ZIC1-201ENST00000282928 TPRXLQ17RH7 258 aa9.99□□□□□ -0.81
ZIC1-201ENST00000282928 SPATA8Q6RVD6 105 aa9.99□□□□□ -0.81
ZIC1-201ENST00000282928 A0A0A0MQY5 61 aa9.98□□□□□ -0.81
ZIC1-201ENST00000282928 SPENQ96T58 3664 aaKnown RBP9.97□□□□□ -0.81
ZIC1-201ENST00000282928 KRTAP1-4P0C5Y4 121 aa9.96□□□□□ -0.81
ZIC1-201ENST00000282928 DMDP11532 3685 aa9.96□□□□□ -0.81
ZIC1-201ENST00000282928 A6NN06 94 aa9.96□□□□□ -0.82
ZIC1-201ENST00000282928 DMBT1Q9UGM3 2413 aaPredicted RBP9.94□□□□□ -0.82
ZIC1-201ENST00000282928 CELSR2Q9HCU4 2923 aa9.94□□□□□ -0.82
ZIC1-201ENST00000282928 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
ZIC1-201ENST00000282928 DCHS2Q6V1P9 2916 aa9.86□□□□□ -0.83
ZIC1-201ENST00000282928 CFAP47Q6ZTR5 3102 aa9.85□□□□□ -0.83
ZIC1-201ENST00000282928 ASH1LQ9NR48 2969 aaKnown RBP9.82□□□□□ -0.84
ZIC1-201ENST00000282928 XP32Q5T750 250 aa9.82□□□□□ -0.84
ZIC1-201ENST00000282928 LOC400499M0QZD8 3231 aa9.77□□□□□ -0.85
ZIC1-201ENST00000282928 HRNRQ86YZ3 2850 aaPredicted RBP9.76□□□□□ -0.85
ZIC1-201ENST00000282928 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
ZIC1-201ENST00000282928 FLG2Q5D862 2391 aaPredicted RBP9.74□□□□□ -0.85
ZIC1-201ENST00000282928 NF1P21359 2839 aa9.73□□□□□ -0.85
ZIC1-201ENST00000282928 TNP1P09430 55 aa9.66□□□□□ -0.86
ZIC1-201ENST00000282928 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
ZIC1-201ENST00000282928 KRTAP10-8P60410 259 aa9.63□□□□□ -0.87
ZIC1-201ENST00000282928 MXRA5Q9NR99 2828 aa9.63□□□□□ -0.87
ZIC1-201ENST00000282928 FBN2P35556 2912 aa9.62□□□□□ -0.87
ZIC1-201ENST00000282928 PP632Q6XCG6 107 aa9.57□□□□□ -0.88
ZIC1-201ENST00000282928 A8MU10 97 aa9.55□□□□□ -0.88
ZIC1-201ENST00000282928 MUC3AQ02505 3323 aa9.54□□□□□ -0.88
ZIC1-201ENST00000282928 DCHS1Q96JQ0 3298 aa9.48□□□□□ -0.89
ZIC1-201ENST00000282928 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
ZIC1-201ENST00000282928 KRTAP25-1Q3LHN0 102 aa9.46□□□□□ -0.89
ZIC1-201ENST00000282928 TENM1Q9UKZ4 2725 aa9.45□□□□□ -0.9
ZIC1-201ENST00000282928 PRO2289Q9P1D8 64 aa9.45□□□□□ -0.9
ZIC1-201ENST00000282928 ASPMQ8IZT6 3477 aa9.44□□□□□ -0.9
ZIC1-201ENST00000282928 SMG1Q96Q15 3661 aaKnown RBP9.42□□□□□ -0.9
ZIC1-201ENST00000282928 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
ZIC1-201ENST00000282928 TENM2Q9NT68 2774 aa9.39□□□□□ -0.91
ZIC1-201ENST00000282928 RELNP78509 3460 aa9.36□□□□□ -0.91
ZIC1-201ENST00000282928 NDUFAF8A1L188 74 aa9.36□□□□□ -0.91
ZIC1-201ENST00000282928 PDZD2O15018 2839 aa9.35□□□□□ -0.91
ZIC1-201ENST00000282928 PKD1L1Q8TDX9 2849 aa9.32□□□□□ -0.92
ZIC1-201ENST00000282928 CELSR1Q9NYQ6 3014 aa9.3□□□□□ -0.92
ZIC1-201ENST00000282928 KRTAP10-10P60014 251 aa9.28□□□□□ -0.92
ZIC1-201ENST00000282928 ZFHX3Q15911 3703 aa9.26□□□□□ -0.93
ZIC1-201ENST00000282928 OTOGQ6ZRI0 2925 aa9.25□□□□□ -0.93
ZIC1-201ENST00000282928 H0YAA0 97 aa9.18□□□□□ -0.94
ZIC1-201ENST00000282928 LAMA5O15230 3695 aa9.17□□□□□ -0.94
ZIC1-201ENST00000282928 BSNQ9UPA5 3926 aa9.09□□□□□ -0.95
ZIC1-201ENST00000282928 FBN1P35555 2871 aaKnown RBP9.08□□□□□ -0.96
ZIC1-201ENST00000282928 CSMD1Q96PZ7 3565 aa9.06□□□□□ -0.96
ZIC1-201ENST00000282928 VWFP04275 2813 aa9.05□□□□□ -0.96
ZIC1-201ENST00000282928 TGP01266 2768 aa9.04□□□□□ -0.96
ZIC1-201ENST00000282928 NBPF19A0A087WUL8 3843 aa9.02□□□□□ -0.97
ZIC1-201ENST00000282928 SVEP1Q4LDE5 3571 aa8.93□□□□□ -0.98
ZIC1-201ENST00000282928 P0C880 135 aa8.91□□□□□ -0.98
ZIC1-201ENST00000282928 C10orf95Q9H7T3 257 aa8.89□□□□□ -0.99
ZIC1-201ENST00000282928 VPS13CQ709C8 3753 aa8.85□□□□□ -0.99
ZIC1-201ENST00000282928 MT1HL1P0DM35 61 aa8.75□□□□□ -1.01
ZIC1-201ENST00000282928 SRRM2Q9UQ35 2752 aaKnown RBP8.72□□□□□ -1.01
ZIC1-201ENST00000282928 AKAP9Q99996 3911 aa8.71□□□□□ -1.02
ZIC1-201ENST00000282928 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.02
ZIC1-201ENST00000282928 ANK3Q12955 4377 aaKnown RBP8.61□□□□□ -1.03
ZIC1-201ENST00000282928 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
ZIC1-201ENST00000282928 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
ZIC1-201ENST00000282928 FBN3Q75N90 2809 aa8.59□□□□□ -1.03
ZIC1-201ENST00000282928 KRTAP3-1Q9BYR8 98 aa8.58□□□□□ -1.04
ZIC1-201ENST00000282928 KRTAP12-1P59990 96 aa8.52□□□□□ -1.04
ZIC1-201ENST00000282928 KRTAP12-2P59991 146 aa8.49□□□□□ -1.05
ZIC1-201ENST00000282928 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
ZIC1-201ENST00000282928 ALMS1Q8TCU4 4167 aa8.39□□□□□ -1.07
ZIC1-201ENST00000282928 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
ZIC1-201ENST00000282928 MEGF8Q7Z7M0 2845 aa8.33□□□□□ -1.08
ZIC1-201ENST00000282928 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
ZIC1-201ENST00000282928 CUBNO60494 3623 aa8.29□□□□□ -1.08
ZIC1-201ENST00000282928 HUWE1Q7Z6Z7 4374 aaKnown RBP8.26□□□□□ -1.09
ZIC1-201ENST00000282928 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
ZIC1-201ENST00000282928 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
ZIC1-201ENST00000282928 KRTAP15-1Q3LI76 137 aa8.14□□□□□ -1.11
ZIC1-201ENST00000282928 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
ZIC1-201ENST00000282928 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
ZIC1-201ENST00000282928 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
ZIC1-201ENST00000282928 ZNF469Q96JG9 3925 aaPredicted RBP8□□□□□ -1.13
ZIC1-201ENST00000282928 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
ZIC1-201ENST00000282928 DNAH1Q9P2D7 4330 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms