RNA–Protein interactions for RNA: ENST00000275820.3

NOM1-201, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOM1, Length 6,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-201ENST00000275820 FRYLO94915 3013 aa10.56□□□□□ -0.72
NOM1-201ENST00000275820 UTP20O75691 2785 aaKnown RBP10.55□□□□□ -0.72
NOM1-201ENST00000275820 ASH1LQ9NR48 2969 aaKnown RBP10.5□□□□□ -0.73
NOM1-201ENST00000275820 APCP25054 2843 aa10.49□□□□□ -0.73
NOM1-201ENST00000275820 KRTAP25-1Q3LHN0 102 aa10.48□□□□□ -0.73
NOM1-201ENST00000275820 KMT2BQ9UMN6 2715 aaPredicted RBP10.44□□□□□ -0.74
NOM1-201ENST00000275820 HIVEP1P15822 2718 aa10.42□□□□□ -0.74
NOM1-201ENST00000275820 PLAC4Q8WY50 150 aa10.4□□□□□ -0.74
NOM1-201ENST00000275820 A8MUU9 505 aa10.38□□□□□ -0.75
NOM1-201ENST00000275820 CFAP47Q6ZTR5 3102 aa10.36□□□□□ -0.75
NOM1-201ENST00000275820 ZZEF1O43149 2961 aa10.35□□□□□ -0.75
NOM1-201ENST00000275820 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.76
NOM1-201ENST00000275820 EYSQ5T1H1 3165 aa10.31□□□□□ -0.76
NOM1-201ENST00000275820 SPTBN5Q9NRC6 3674 aaKnown RBP10.3□□□□□ -0.76
NOM1-201ENST00000275820 CELSR2Q9HCU4 2923 aa10.27□□□□□ -0.76
NOM1-201ENST00000275820 C20orf166-AS1Q96NR2 134 aa10.26□□□□□ -0.77
NOM1-201ENST00000275820 SPEGQ15772 3267 aa10.25□□□□□ -0.77
NOM1-201ENST00000275820 REV3LO60673 3130 aa10.22□□□□□ -0.77
NOM1-201ENST00000275820 ZANQ9Y493 2812 aa10.21□□□□□ -0.77
NOM1-201ENST00000275820 HRNRQ86YZ3 2850 aaPredicted RBP10.19□□□□□ -0.78
NOM1-201ENST00000275820 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
NOM1-201ENST00000275820 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
NOM1-201ENST00000275820 DCHS2Q6V1P9 2916 aa10.15□□□□□ -0.78
NOM1-201ENST00000275820 CRYBG3Q68DQ2 2970 aa10.14□□□□□ -0.79
NOM1-201ENST00000275820 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
NOM1-201ENST00000275820 DMXL1Q9Y485 3027 aa10.09□□□□□ -0.79
NOM1-201ENST00000275820 TNRC18O15417 2968 aaPredicted RBP10.09□□□□□ -0.79
NOM1-201ENST00000275820 TENM4Q6N022 2769 aa10.08□□□□□ -0.8
NOM1-201ENST00000275820 NDUFAF8A1L188 74 aa10.07□□□□□ -0.8
NOM1-201ENST00000275820 LOC400499M0QZD8 3231 aa10.03□□□□□ -0.8
NOM1-201ENST00000275820 FBN2P35556 2912 aa9.99□□□□□ -0.81
NOM1-201ENST00000275820 KRTAP21-3Q3LHN1 58 aa9.99□□□□□ -0.81
NOM1-201ENST00000275820 XP32Q5T750 250 aa9.98□□□□□ -0.81
NOM1-201ENST00000275820 TNP1P09430 55 aa9.96□□□□□ -0.82
NOM1-201ENST00000275820 H0YAA0 97 aa9.95□□□□□ -0.82
NOM1-201ENST00000275820 NF1P21359 2839 aa9.88□□□□□ -0.83
NOM1-201ENST00000275820 C10orf95Q9H7T3 257 aa9.88□□□□□ -0.83
NOM1-201ENST00000275820 MYO15AQ9UKN7 3530 aa9.86□□□□□ -0.83
NOM1-201ENST00000275820 PP632Q6XCG6 107 aa9.74□□□□□ -0.85
NOM1-201ENST00000275820 TPRXLQ17RH7 258 aa9.71□□□□□ -0.85
NOM1-201ENST00000275820 KRTAP13-3Q3SY46 172 aa9.71□□□□□ -0.86
NOM1-201ENST00000275820 CELSR1Q9NYQ6 3014 aa9.7□□□□□ -0.86
NOM1-201ENST00000275820 MXRA5Q9NR99 2828 aa9.68□□□□□ -0.86
NOM1-201ENST00000275820 A0A1B0GVY2 172 aa9.67□□□□□ -0.86
NOM1-201ENST00000275820 P0C880 135 aa9.65□□□□□ -0.86
NOM1-201ENST00000275820 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
NOM1-201ENST00000275820 TENM3Q9P273 2699 aa9.63□□□□□ -0.87
NOM1-201ENST00000275820 KRTAP10-8P60410 259 aa9.63□□□□□ -0.87
NOM1-201ENST00000275820 RELNP78509 3460 aa9.62□□□□□ -0.87
NOM1-201ENST00000275820 WDFY3Q8IZQ1 3526 aa9.61□□□□□ -0.87
NOM1-201ENST00000275820 TGP01266 2768 aa9.6□□□□□ -0.87
NOM1-201ENST00000275820 TENM2Q9NT68 2774 aa9.55□□□□□ -0.88
NOM1-201ENST00000275820 ZFHX4Q86UP3 3567 aa9.46□□□□□ -0.89
NOM1-201ENST00000275820 ASPMQ8IZT6 3477 aa9.44□□□□□ -0.9
NOM1-201ENST00000275820 DCHS1Q96JQ0 3298 aa9.42□□□□□ -0.9
NOM1-201ENST00000275820 KRTAP10-10P60014 251 aa9.39□□□□□ -0.91
NOM1-201ENST00000275820 KRTAP12-2P59991 146 aa9.33□□□□□ -0.92
NOM1-201ENST00000275820 LAMA5O15230 3695 aa9.32□□□□□ -0.92
NOM1-201ENST00000275820 PDZD2O15018 2839 aa9.32□□□□□ -0.92
NOM1-201ENST00000275820 CSMD1Q96PZ7 3565 aa9.31□□□□□ -0.92
NOM1-201ENST00000275820 PKD1L1Q8TDX9 2849 aa9.29□□□□□ -0.92
NOM1-201ENST00000275820 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
NOM1-201ENST00000275820 PRO2289Q9P1D8 64 aa9.21□□□□□ -0.94
NOM1-201ENST00000275820 VWFP04275 2813 aa9.19□□□□□ -0.94
NOM1-201ENST00000275820 SMG1Q96Q15 3661 aaKnown RBP9.16□□□□□ -0.94
NOM1-201ENST00000275820 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
NOM1-201ENST00000275820 NBPF19A0A087WUL8 3843 aa9.16□□□□□ -0.94
NOM1-201ENST00000275820 DMDP11532 3685 aa9.1□□□□□ -0.95
NOM1-201ENST00000275820 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
NOM1-201ENST00000275820 FBN1P35555 2871 aaKnown RBP9.08□□□□□ -0.96
NOM1-201ENST00000275820 OTOGQ6ZRI0 2925 aa9.04□□□□□ -0.96
NOM1-201ENST00000275820 ANK3Q12955 4377 aaKnown RBP9.02□□□□□ -0.97
NOM1-201ENST00000275820 KRTAP10-6P60371 365 aaPredicted RBP8.96□□□□□ -0.97
NOM1-201ENST00000275820 SVEP1Q4LDE5 3571 aa8.96□□□□□ -0.98
NOM1-201ENST00000275820 FBN3Q75N90 2809 aa8.89□□□□□ -0.99
NOM1-201ENST00000275820 MUC3AQ02505 3323 aa8.86□□□□□ -0.99
NOM1-201ENST00000275820 ZFHX3Q15911 3703 aa8.84□□□□□ -0.99
NOM1-201ENST00000275820 MEGF8Q7Z7M0 2845 aa8.77□□□□□ -1.01
NOM1-201ENST00000275820 CSMD2Q7Z408 3487 aa8.75□□□□□ -1.01
NOM1-201ENST00000275820 CUBNO60494 3623 aa8.74□□□□□ -1.01
NOM1-201ENST00000275820 SPENQ96T58 3664 aaKnown RBP8.73□□□□□ -1.01
NOM1-201ENST00000275820 TRRAPQ9Y4A5 3859 aa8.7□□□□□ -1.02
NOM1-201ENST00000275820 SRRM2Q9UQ35 2752 aaKnown RBP8.67□□□□□ -1.02
NOM1-201ENST00000275820 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
NOM1-201ENST00000275820 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
NOM1-201ENST00000275820 MT1HL1P0DM35 61 aa8.66□□□□□ -1.02
NOM1-201ENST00000275820 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
NOM1-201ENST00000275820 COL7A1Q02388 2944 aa8.56□□□□□ -1.04
NOM1-201ENST00000275820 BSNQ9UPA5 3926 aa8.56□□□□□ -1.04
NOM1-201ENST00000275820 HUWE1Q7Z6Z7 4374 aaKnown RBP8.55□□□□□ -1.04
NOM1-201ENST00000275820 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
NOM1-201ENST00000275820 VPS13CQ709C8 3753 aa8.34□□□□□ -1.07
NOM1-201ENST00000275820 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
NOM1-201ENST00000275820 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
NOM1-201ENST00000275820 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
NOM1-201ENST00000275820 INE1O15225 51 aa8.16□□□□□ -1.1
NOM1-201ENST00000275820 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
NOM1-201ENST00000275820 KRTAP23-1A1A580 65 aa8.08□□□□□ -1.12
NOM1-201ENST00000275820 KRTAP12-3P60328 96 aa8.07□□□□□ -1.12
NOM1-201ENST00000275820 DNAH9Q9NYC9 4486 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms