RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 A0A096LNI7 61 aa5.36□□□□□ -1.55
CTDSPL-201ENST00000273179 H3BNG1 76 aa5.36□□□□□ -1.55
CTDSPL-201ENST00000273179 KRTAP11-1Q8IUC1 163 aa5.36□□□□□ -1.55
CTDSPL-201ENST00000273179 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
CTDSPL-201ENST00000273179 KRTAP26-1Q6PEX3 210 aa5.35□□□□□ -1.55
CTDSPL-201ENST00000273179 PKD1L1Q8TDX9 2849 aa5.35□□□□□ -1.55
CTDSPL-201ENST00000273179 PSORS1C2Q9UIG4 136 aa5.34□□□□□ -1.56
CTDSPL-201ENST00000273179 F8P00451 2351 aa5.34□□□□□ -1.56
CTDSPL-201ENST00000273179 GIG44P09565 113 aaPredicted RBP5.33□□□□□ -1.56
CTDSPL-201ENST00000273179 STAB1Q9NY15 2570 aa5.33□□□□□ -1.56
CTDSPL-201ENST00000273179 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
CTDSPL-201ENST00000273179 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
CTDSPL-201ENST00000273179 Q8N377 158 aa5.32□□□□□ -1.56
CTDSPL-201ENST00000273179 ANK2Q01484 3957 aa5.31□□□□□ -1.56
CTDSPL-201ENST00000273179 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
CTDSPL-201ENST00000273179 KRTAP10-3P60369 221 aa5.31□□□□□ -1.56
CTDSPL-201ENST00000273179 MAST4O15021 2626 aa5.31□□□□□ -1.56
CTDSPL-201ENST00000273179 A0A1B0GU33 70 aa5.31□□□□□ -1.56
CTDSPL-201ENST00000273179 LY6G6CO95867 125 aa5.3□□□□□ -1.56
CTDSPL-201ENST00000273179 GVQW2A0A096LPI5 108 aaPredicted RBP5.29□□□□□ -1.56
CTDSPL-201ENST00000273179 LINC01556Q5JQF7 62 aa5.29□□□□□ -1.56
CTDSPL-201ENST00000273179 NOTCH1P46531 2555 aa5.29□□□□□ -1.56
CTDSPL-201ENST00000273179 R4GN34 69 aa5.27□□□□□ -1.57
CTDSPL-201ENST00000273179 COL6A5A8TX70 2615 aa5.25□□□□□ -1.57
CTDSPL-201ENST00000273179 APLNQ9ULZ1 77 aa5.24□□□□□ -1.57
CTDSPL-201ENST00000273179 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
CTDSPL-201ENST00000273179 KRTAP29-1A8MX34 341 aaPredicted RBP5.24□□□□□ -1.57
CTDSPL-201ENST00000273179 NBEAL1Q6ZS30 2694 aa5.23□□□□□ -1.57
CTDSPL-201ENST00000273179 SPINK6Q6UWN8 80 aa5.23□□□□□ -1.57
CTDSPL-201ENST00000273179 Q8N1X5 172 aa5.22□□□□□ -1.57
CTDSPL-201ENST00000273179 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
CTDSPL-201ENST00000273179 IGKV2-30P06310 120 aa5.22□□□□□ -1.57
CTDSPL-201ENST00000273179 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
CTDSPL-201ENST00000273179 IGFL1Q6UW32 110 aa5.21□□□□□ -1.57
CTDSPL-201ENST00000273179 TENM3Q9P273 2699 aa5.2□□□□□ -1.58
CTDSPL-201ENST00000273179 KRTAP24-1Q3LI83 254 aa5.19□□□□□ -1.58
CTDSPL-201ENST00000273179 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
CTDSPL-201ENST00000273179 BAHCC1Q9P281 2608 aa5.18□□□□□ -1.58
CTDSPL-201ENST00000273179 DMBT1Q9UGM3 2413 aaPredicted RBP5.17□□□□□ -1.58
CTDSPL-201ENST00000273179 PLAC4Q8WY50 150 aa5.15□□□□□ -1.58
CTDSPL-201ENST00000273179 MGAM2Q2M2H8 2515 aa5.15□□□□□ -1.58
CTDSPL-201ENST00000273179 A0A0D9SG42 100 aa5.15□□□□□ -1.59
CTDSPL-201ENST00000273179 CSMD3Q7Z407 3707 aa5.14□□□□□ -1.59
CTDSPL-201ENST00000273179 CMYA5Q8N3K9 4069 aa5.13□□□□□ -1.59
CTDSPL-201ENST00000273179 LYSTQ99698 3801 aa5.12□□□□□ -1.59
CTDSPL-201ENST00000273179 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
CTDSPL-201ENST00000273179 KRTAP10-11P60412 298 aa5.12□□□□□ -1.59
CTDSPL-201ENST00000273179 RPL37P61927 97 aaKnown RBP5.12□□□□□ -1.59
CTDSPL-201ENST00000273179 H1FX-AS1Q4G0G2 97 aa5.09□□□□□ -1.6
CTDSPL-201ENST00000273179 TENM2Q9NT68 2774 aa5.08□□□□□ -1.6
CTDSPL-201ENST00000273179 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
CTDSPL-201ENST00000273179 K7EIL1 84 aa5.05□□□□□ -1.6
CTDSPL-201ENST00000273179 COL7A1Q02388 2944 aa5.05□□□□□ -1.6
CTDSPL-201ENST00000273179 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
CTDSPL-201ENST00000273179 H0YAA0 97 aa5.01□□□□□ -1.61
CTDSPL-201ENST00000273179 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
CTDSPL-201ENST00000273179 Q6ZSA8 131 aa4.98□□□□□ -1.61
CTDSPL-201ENST00000273179 DNAH10Q8IVF4 4471 aa4.98□□□□□ -1.61
CTDSPL-201ENST00000273179 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
CTDSPL-201ENST00000273179 HUWE1Q7Z6Z7 4374 aaKnown RBP4.97□□□□□ -1.61
CTDSPL-201ENST00000273179 DNAH7Q8WXX0 4024 aa4.96□□□□□ -1.62
CTDSPL-201ENST00000273179 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
CTDSPL-201ENST00000273179 SPRR1AP35321 89 aa4.95□□□□□ -1.62
CTDSPL-201ENST00000273179 ANAPC11Q9NYG5 84 aa4.94□□□□□ -1.62
CTDSPL-201ENST00000273179 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
CTDSPL-201ENST00000273179 DNHD1Q96M86 4753 aa4.92□□□□□ -1.62
CTDSPL-201ENST00000273179 DNAH9Q9NYC9 4486 aa4.9□□□□□ -1.62
CTDSPL-201ENST00000273179 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
CTDSPL-201ENST00000273179 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
CTDSPL-201ENST00000273179 TGP01266 2768 aa4.87□□□□□ -1.63
CTDSPL-201ENST00000273179 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
CTDSPL-201ENST00000273179 SPRR1BP22528 89 aa4.86□□□□□ -1.63
CTDSPL-201ENST00000273179 PLECQ15149 4684 aaKnown RBP4.85□□□□□ -1.63
CTDSPL-201ENST00000273179 MEGF8Q7Z7M0 2845 aa4.85□□□□□ -1.63
CTDSPL-201ENST00000273179 DNAH1Q9P2D7 4330 aa4.83□□□□□ -1.64
CTDSPL-201ENST00000273179 STARD9Q9P2P6 4700 aa4.82□□□□□ -1.64
CTDSPL-201ENST00000273179 KMT2AQ03164 3969 aa4.8□□□□□ -1.64
CTDSPL-201ENST00000273179 INE1O15225 51 aa4.8□□□□□ -1.64
CTDSPL-201ENST00000273179 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
CTDSPL-201ENST00000273179 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
CTDSPL-201ENST00000273179 KRTAP7-1Q8IUC3 87 aa4.72□□□□□ -1.65
CTDSPL-201ENST00000273179 FBN3Q75N90 2809 aa4.72□□□□□ -1.65
CTDSPL-201ENST00000273179 DNAH2Q9P225 4427 aa4.71□□□□□ -1.66
CTDSPL-201ENST00000273179 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
CTDSPL-201ENST00000273179 S4R3F8 94 aa4.7□□□□□ -1.66
CTDSPL-201ENST00000273179 VPS13DQ5THJ4 4388 aa4.7□□□□□ -1.66
CTDSPL-201ENST00000273179 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
CTDSPL-201ENST00000273179 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
CTDSPL-201ENST00000273179 DNAH6Q9C0G6 4158 aa4.66□□□□□ -1.66
CTDSPL-201ENST00000273179 DYNC2H1Q8NCM8 4307 aaKnown RBP4.65□□□□□ -1.66
CTDSPL-201ENST00000273179 HECTD4Q9Y4D8 3996 aa4.65□□□□□ -1.67
CTDSPL-201ENST00000273179 HYDINQ4G0P3 5121 aa4.64□□□□□ -1.67
CTDSPL-201ENST00000273179 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
CTDSPL-201ENST00000273179 KRTAP13-1Q8IUC0 172 aa4.62□□□□□ -1.67
CTDSPL-201ENST00000273179 KRTAP21-3Q3LHN1 58 aa4.61□□□□□ -1.67
CTDSPL-201ENST00000273179 DNAH17Q9UFH2 4485 aa4.6□□□□□ -1.67
CTDSPL-201ENST00000273179 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
CTDSPL-201ENST00000273179 DNAH11Q96DT5 4516 aa4.58□□□□□ -1.68
CTDSPL-201ENST00000273179 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
CTDSPL-201ENST00000273179 KRTAP10-2P60368 255 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms