RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 MYT1Q01538 1121 aa16.31■□□□□ 0.2
CTDSPL-201ENST00000273179 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
CTDSPL-201ENST00000273179 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
CTDSPL-201ENST00000273179 TTBK1Q5TCY1 1321 aaPredicted RBP15.59■□□□□ 0.09
CTDSPL-201ENST00000273179 ERICH6Q7L0X2 663 aa15.49■□□□□ 0.07
CTDSPL-201ENST00000273179 NISCHQ9Y2I1 1504 aa15.39■□□□□ 0.05
CTDSPL-201ENST00000273179 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
CTDSPL-201ENST00000273179 DAXXQ9UER7 740 aaPredicted RBP14.8□□□□□ -0.04
CTDSPL-201ENST00000273179 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
CTDSPL-201ENST00000273179 EIF5BO60841 1220 aaKnown RBP14.55□□□□□ -0.08
CTDSPL-201ENST00000273179 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
CTDSPL-201ENST00000273179 APLP2Q06481 763 aa14.48□□□□□ -0.09
CTDSPL-201ENST00000273179 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
CTDSPL-201ENST00000273179 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
CTDSPL-201ENST00000273179 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
CTDSPL-201ENST00000273179 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
CTDSPL-201ENST00000273179 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
CTDSPL-201ENST00000273179 PODXL2Q9NZ53 605 aa13.87□□□□□ -0.19
CTDSPL-201ENST00000273179 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
CTDSPL-201ENST00000273179 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
CTDSPL-201ENST00000273179 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
CTDSPL-201ENST00000273179 ARXQ96QS3 562 aa13.67□□□□□ -0.22
CTDSPL-201ENST00000273179 KLHL34Q8N239 644 aa13.58□□□□□ -0.23
CTDSPL-201ENST00000273179 HOMEZQ8IX15 550 aa13.58□□□□□ -0.24
CTDSPL-201ENST00000273179 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
CTDSPL-201ENST00000273179 NEFLP07196 543 aa13.56□□□□□ -0.24
CTDSPL-201ENST00000273179 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL-201ENST00000273179 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
CTDSPL-201ENST00000273179 PKNOX2Q96KN3 472 aa13.42□□□□□ -0.26
CTDSPL-201ENST00000273179 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
CTDSPL-201ENST00000273179 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
CTDSPL-201ENST00000273179 HRCP23327 699 aa13.37□□□□□ -0.27
CTDSPL-201ENST00000273179 HAP1P54257 671 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL-201ENST00000273179 PDE4CQ08493 712 aa13.34□□□□□ -0.27
CTDSPL-201ENST00000273179 DCAF8L2P0C7V8 631 aa13.33□□□□□ -0.27
CTDSPL-201ENST00000273179 PDIA4P13667 645 aaKnown RBP13.33□□□□□ -0.28
CTDSPL-201ENST00000273179 NPM2Q86SE8 214 aaKnown RBP13.33□□□□□ -0.28
CTDSPL-201ENST00000273179 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
CTDSPL-201ENST00000273179 GLIPR1L2Q4G1C9 344 aa13.29□□□□□ -0.28
CTDSPL-201ENST00000273179 TPRNQ4KMQ1 711 aa13.28□□□□□ -0.28
CTDSPL-201ENST00000273179 ANP32EQ9BTT0 268 aa13.26□□□□□ -0.29
CTDSPL-201ENST00000273179 UBE2Q2Q8WVN8 375 aa13.25□□□□□ -0.29
CTDSPL-201ENST00000273179 ZEB1P37275 1124 aaPredicted RBP13.17□□□□□ -0.3
CTDSPL-201ENST00000273179 ANO8Q9HCE9 1232 aaPredicted RBP13.17□□□□□ -0.3
CTDSPL-201ENST00000273179 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
CTDSPL-201ENST00000273179 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
CTDSPL-201ENST00000273179 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
CTDSPL-201ENST00000273179 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
CTDSPL-201ENST00000273179 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL-201ENST00000273179 GTF3C3Q9Y5Q9 886 aa13.07□□□□□ -0.32
CTDSPL-201ENST00000273179 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
CTDSPL-201ENST00000273179 BCANQ96GW7 911 aa13.04□□□□□ -0.32
CTDSPL-201ENST00000273179 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
CTDSPL-201ENST00000273179 KCNA4P22459 653 aa13□□□□□ -0.33
CTDSPL-201ENST00000273179 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
CTDSPL-201ENST00000273179 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
CTDSPL-201ENST00000273179 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
CTDSPL-201ENST00000273179 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.33
CTDSPL-201ENST00000273179 CCDC180Q9P1Z9 1646 aa12.96□□□□□ -0.33
CTDSPL-201ENST00000273179 YTHDC1Q96MU7 727 aaKnown RBP12.95□□□□□ -0.34
CTDSPL-201ENST00000273179 DHX37Q8IY37 1157 aaKnown RBP12.94□□□□□ -0.34
CTDSPL-201ENST00000273179 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
CTDSPL-201ENST00000273179 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
CTDSPL-201ENST00000273179 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
CTDSPL-201ENST00000273179 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
CTDSPL-201ENST00000273179 MYT1LQ9UL68 1186 aa12.9□□□□□ -0.34
CTDSPL-201ENST00000273179 CHMP4AQ9BY43 222 aa12.9□□□□□ -0.35
CTDSPL-201ENST00000273179 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
CTDSPL-201ENST00000273179 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
CTDSPL-201ENST00000273179 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
CTDSPL-201ENST00000273179 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
CTDSPL-201ENST00000273179 DEKP35659 375 aaKnown RBP12.78□□□□□ -0.36
CTDSPL-201ENST00000273179 RTL5Q5HYW3 569 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL-201ENST00000273179 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
CTDSPL-201ENST00000273179 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL-201ENST00000273179 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
CTDSPL-201ENST00000273179 PCGF6Q9BYE7 350 aa12.71□□□□□ -0.37
CTDSPL-201ENST00000273179 FBXO3Q9UK99 471 aa12.71□□□□□ -0.38
CTDSPL-201ENST00000273179 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
CTDSPL-201ENST00000273179 FGD1P98174 961 aa12.67□□□□□ -0.38
CTDSPL-201ENST00000273179 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
CTDSPL-201ENST00000273179 HSP90B1P14625 803 aaKnown RBP12.63□□□□□ -0.39
CTDSPL-201ENST00000273179 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
CTDSPL-201ENST00000273179 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
CTDSPL-201ENST00000273179 ABCC9O60706 1549 aa12.62□□□□□ -0.39
CTDSPL-201ENST00000273179 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
CTDSPL-201ENST00000273179 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
CTDSPL-201ENST00000273179 HMGB1P09429 215 aaKnown RBP12.58□□□□□ -0.4
CTDSPL-201ENST00000273179 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
CTDSPL-201ENST00000273179 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
CTDSPL-201ENST00000273179 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.4
CTDSPL-201ENST00000273179 ZNF526Q8TF50 670 aaPredicted RBP12.48□□□□□ -0.41
CTDSPL-201ENST00000273179 ARID3AQ99856 593 aa12.47□□□□□ -0.41
CTDSPL-201ENST00000273179 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
CTDSPL-201ENST00000273179 SCRIBQ14160 1630 aa12.46□□□□□ -0.42
CTDSPL-201ENST00000273179 ZMYND15Q9H091 742 aa12.45□□□□□ -0.42
CTDSPL-201ENST00000273179 PTMSP20962 102 aa12.44□□□□□ -0.42
CTDSPL-201ENST00000273179 TMEM132AQ24JP5 1023 aa12.43□□□□□ -0.42
CTDSPL-201ENST00000273179 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
CTDSPL-201ENST00000273179 AAMPQ13685 434 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms