RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
ERBB2-201ENST00000269571 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.23
ERBB2-201ENST00000269571 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
ERBB2-201ENST00000269571 SMG1Q96Q15 3661 aaKnown RBP7.34□□□□□ -1.23
ERBB2-201ENST00000269571 A0A0D9SG42 100 aa7.33□□□□□ -1.24
ERBB2-201ENST00000269571 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
ERBB2-201ENST00000269571 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
ERBB2-201ENST00000269571 A0A1B0GU33 70 aa7.29□□□□□ -1.24
ERBB2-201ENST00000269571 SPRR1BP22528 89 aa7.28□□□□□ -1.24
ERBB2-201ENST00000269571 SVEP1Q4LDE5 3571 aa7.26□□□□□ -1.25
ERBB2-201ENST00000269571 Q5W150 140 aa7.26□□□□□ -1.25
ERBB2-201ENST00000269571 Q6ZR54 194 aa7.25□□□□□ -1.25
ERBB2-201ENST00000269571 A0A087X002 238 aa7.24□□□□□ -1.25
ERBB2-201ENST00000269571 NOTCH2NLQ7Z3S9 236 aa7.24□□□□□ -1.25
ERBB2-201ENST00000269571 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
ERBB2-201ENST00000269571 PANO1I0J062 215 aa7.24□□□□□ -1.25
ERBB2-201ENST00000269571 J3QL48 77 aa7.23□□□□□ -1.25
ERBB2-201ENST00000269571 KRTAP7-1Q8IUC3 87 aa7.22□□□□□ -1.25
ERBB2-201ENST00000269571 ROMO1P60602 79 aa7.22□□□□□ -1.25
ERBB2-201ENST00000269571 KRTAP11-1Q8IUC1 163 aa7.21□□□□□ -1.25
ERBB2-201ENST00000269571 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.26
ERBB2-201ENST00000269571 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
ERBB2-201ENST00000269571 COX6B2Q6YFQ2 88 aa7.2□□□□□ -1.26
ERBB2-201ENST00000269571 TENM1Q9UKZ4 2725 aa7.19□□□□□ -1.26
ERBB2-201ENST00000269571 PLAC8Q9NZF1 115 aa7.19□□□□□ -1.26
ERBB2-201ENST00000269571 FBN1P35555 2871 aaKnown RBP7.18□□□□□ -1.26
ERBB2-201ENST00000269571 OTOGQ6ZRI0 2925 aa7.17□□□□□ -1.26
ERBB2-201ENST00000269571 PKD1L1Q8TDX9 2849 aa7.14□□□□□ -1.27
ERBB2-201ENST00000269571 LUZP6Q538Z0 58 aa7.13□□□□□ -1.27
ERBB2-201ENST00000269571 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
ERBB2-201ENST00000269571 ZFHX3Q15911 3703 aa7.13□□□□□ -1.27
ERBB2-201ENST00000269571 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
ERBB2-201ENST00000269571 NBPF19A0A087WUL8 3843 aa7.11□□□□□ -1.27
ERBB2-201ENST00000269571 PDZD2O15018 2839 aa7.1□□□□□ -1.27
ERBB2-201ENST00000269571 VWFP04275 2813 aa7.1□□□□□ -1.27
ERBB2-201ENST00000269571 SPENQ96T58 3664 aaKnown RBP7.08□□□□□ -1.28
ERBB2-201ENST00000269571 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
ERBB2-201ENST00000269571 CSMD2Q7Z408 3487 aa7.06□□□□□ -1.28
ERBB2-201ENST00000269571 KRTAP10-1P60331 282 aa7.04□□□□□ -1.28
ERBB2-201ENST00000269571 Q6ZSA8 131 aa7.02□□□□□ -1.29
ERBB2-201ENST00000269571 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
ERBB2-201ENST00000269571 A8MUU9 505 aa7□□□□□ -1.29
ERBB2-201ENST00000269571 H1FX-AS1Q4G0G2 97 aa7□□□□□ -1.29
ERBB2-201ENST00000269571 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
ERBB2-201ENST00000269571 TENM2Q9NT68 2774 aa6.94□□□□□ -1.3
ERBB2-201ENST00000269571 TGP01266 2768 aa6.92□□□□□ -1.3
ERBB2-201ENST00000269571 Q6ZRN7 208 aaPredicted RBP6.91□□□□□ -1.3
ERBB2-201ENST00000269571 C20orf166-AS1Q96NR2 134 aa6.9□□□□□ -1.31
ERBB2-201ENST00000269571 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
ERBB2-201ENST00000269571 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
ERBB2-201ENST00000269571 S4R3F8 94 aa6.85□□□□□ -1.31
ERBB2-201ENST00000269571 BSNQ9UPA5 3926 aa6.83□□□□□ -1.32
ERBB2-201ENST00000269571 Q5VSD8 79 aa6.83□□□□□ -1.32
ERBB2-201ENST00000269571 SRRM2Q9UQ35 2752 aaKnown RBP6.82□□□□□ -1.32
ERBB2-201ENST00000269571 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
ERBB2-201ENST00000269571 R4GN34 69 aa6.79□□□□□ -1.32
ERBB2-201ENST00000269571 M0R2T5 61 aa6.77□□□□□ -1.33
ERBB2-201ENST00000269571 TRRAPQ9Y4A5 3859 aa6.71□□□□□ -1.34
ERBB2-201ENST00000269571 H0YAA0 97 aa6.7□□□□□ -1.34
ERBB2-201ENST00000269571 M0QZ58 72 aa6.67□□□□□ -1.34
ERBB2-201ENST00000269571 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
ERBB2-201ENST00000269571 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
ERBB2-201ENST00000269571 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
ERBB2-201ENST00000269571 FBN3Q75N90 2809 aa6.61□□□□□ -1.35
ERBB2-201ENST00000269571 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
ERBB2-201ENST00000269571 P0C880 135 aa6.53□□□□□ -1.36
ERBB2-201ENST00000269571 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
ERBB2-201ENST00000269571 VPS13CQ709C8 3753 aa6.52□□□□□ -1.37
ERBB2-201ENST00000269571 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
ERBB2-201ENST00000269571 KRTAP1-4P0C5Y4 121 aa6.46□□□□□ -1.37
ERBB2-201ENST00000269571 MEGF8Q7Z7M0 2845 aa6.45□□□□□ -1.38
ERBB2-201ENST00000269571 COL7A1Q02388 2944 aa6.45□□□□□ -1.38
ERBB2-201ENST00000269571 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
ERBB2-201ENST00000269571 ZNF469Q96JG9 3925 aaPredicted RBP6.42□□□□□ -1.38
ERBB2-201ENST00000269571 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
ERBB2-201ENST00000269571 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
ERBB2-201ENST00000269571 XP32Q5T750 250 aa6.26□□□□□ -1.41
ERBB2-201ENST00000269571 KRTAP10-8P60410 259 aa6.21□□□□□ -1.41
ERBB2-201ENST00000269571 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
ERBB2-201ENST00000269571 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
ERBB2-201ENST00000269571 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
ERBB2-201ENST00000269571 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
ERBB2-201ENST00000269571 TNP1P09430 55 aa6.11□□□□□ -1.43
ERBB2-201ENST00000269571 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
ERBB2-201ENST00000269571 AKAP9Q99996 3911 aa6.11□□□□□ -1.43
ERBB2-201ENST00000269571 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
ERBB2-201ENST00000269571 HUWE1Q7Z6Z7 4374 aaKnown RBP6.04□□□□□ -1.44
ERBB2-201ENST00000269571 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
ERBB2-201ENST00000269571 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.45
ERBB2-201ENST00000269571 DNHD1Q96M86 4753 aa5.95□□□□□ -1.46
ERBB2-201ENST00000269571 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
ERBB2-201ENST00000269571 DNAH9Q9NYC9 4486 aa5.86□□□□□ -1.47
ERBB2-201ENST00000269571 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
ERBB2-201ENST00000269571 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.48
ERBB2-201ENST00000269571 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
ERBB2-201ENST00000269571 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
ERBB2-201ENST00000269571 MT1HL1P0DM35 61 aa5.71□□□□□ -1.49
ERBB2-201ENST00000269571 KRTAP10-4P60372 401 aaPredicted RBP5.71□□□□□ -1.5
ERBB2-201ENST00000269571 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
ERBB2-201ENST00000269571 DNAH11Q96DT5 4516 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms