RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 LINC00472Q9H8W2 130 aa10.53□□□□□ -0.72
SRF-201ENST00000265354 ZCCHC13Q8WW36 166 aaKnown RBP10.51□□□□□ -0.73
SRF-201ENST00000265354 SRRM2Q9UQ35 2752 aaKnown RBP10.5□□□□□ -0.73
SRF-201ENST00000265354 A6NN06 94 aa10.48□□□□□ -0.73
SRF-201ENST00000265354 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
SRF-201ENST00000265354 ZNF861PO60384 105 aa10.47□□□□□ -0.73
SRF-201ENST00000265354 HRES1P13985 223 aa10.45□□□□□ -0.74
SRF-201ENST00000265354 PANO1I0J062 215 aa10.45□□□□□ -0.74
SRF-201ENST00000265354 A0A087WTM6 91 aa10.42□□□□□ -0.74
SRF-201ENST00000265354 TRRAPQ9Y4A5 3859 aa10.42□□□□□ -0.74
SRF-201ENST00000265354 KRTAP29-1A8MX34 341 aaPredicted RBP10.42□□□□□ -0.74
SRF-201ENST00000265354 Q96NJ1 140 aa10.42□□□□□ -0.74
SRF-201ENST00000265354 APLNQ9ULZ1 77 aa10.41□□□□□ -0.74
SRF-201ENST00000265354 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
SRF-201ENST00000265354 A0A087X002 238 aa10.38□□□□□ -0.75
SRF-201ENST00000265354 NOTCH2NLQ7Z3S9 236 aa10.38□□□□□ -0.75
SRF-201ENST00000265354 Q8N1X5 172 aa10.37□□□□□ -0.75
SRF-201ENST00000265354 TGP01266 2768 aa10.31□□□□□ -0.76
SRF-201ENST00000265354 LCE6AA0A183 80 aa10.31□□□□□ -0.76
SRF-201ENST00000265354 PLA2G1BP04054 148 aaKnown RBP10.3□□□□□ -0.76
SRF-201ENST00000265354 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
SRF-201ENST00000265354 TYMSOSQ8TAI1 123 aa10.29□□□□□ -0.76
SRF-201ENST00000265354 SPRR1BP22528 89 aa10.28□□□□□ -0.76
SRF-201ENST00000265354 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.76
SRF-201ENST00000265354 A0A0D9SG42 100 aa10.25□□□□□ -0.77
SRF-201ENST00000265354 C9orf92A6NGG3 77 aa10.24□□□□□ -0.77
SRF-201ENST00000265354 Q5W150 140 aa10.24□□□□□ -0.77
SRF-201ENST00000265354 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
SRF-201ENST00000265354 ZNF469Q96JG9 3925 aaPredicted RBP10.21□□□□□ -0.77
SRF-201ENST00000265354 COL7A1Q02388 2944 aa10.2□□□□□ -0.78
SRF-201ENST00000265354 CSMD3Q7Z407 3707 aa10.16□□□□□ -0.78
SRF-201ENST00000265354 Q6ZR54 194 aa10.1□□□□□ -0.79
SRF-201ENST00000265354 A0A1B0GU33 70 aa10.07□□□□□ -0.8
SRF-201ENST00000265354 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
SRF-201ENST00000265354 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
SRF-201ENST00000265354 LINC00304Q8N9R0 145 aa9.99□□□□□ -0.81
SRF-201ENST00000265354 NDUFAF8A1L188 74 aa9.99□□□□□ -0.81
SRF-201ENST00000265354 KRTAP16-1A8MUX0 517 aa9.97□□□□□ -0.81
SRF-201ENST00000265354 SPATA8Q6RVD6 105 aa9.96□□□□□ -0.81
SRF-201ENST00000265354 ROMO1P60602 79 aa9.95□□□□□ -0.82
SRF-201ENST00000265354 DMAC1Q96GE9 116 aa9.95□□□□□ -0.82
SRF-201ENST00000265354 LINC00483Q53H64 154 aa9.94□□□□□ -0.82
SRF-201ENST00000265354 KRTAP10-2P60368 255 aa9.93□□□□□ -0.82
SRF-201ENST00000265354 A0A0A0MQY5 61 aa9.92□□□□□ -0.82
SRF-201ENST00000265354 KRTAP13-1Q8IUC0 172 aa9.91□□□□□ -0.82
SRF-201ENST00000265354 KRTAP25-1Q3LHN0 102 aa9.9□□□□□ -0.83
SRF-201ENST00000265354 ASB16-AS1Q495Z4 193 aa9.89□□□□□ -0.83
SRF-201ENST00000265354 AKAP9Q99996 3911 aa9.87□□□□□ -0.83
SRF-201ENST00000265354 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
SRF-201ENST00000265354 LUZP6Q538Z0 58 aa9.84□□□□□ -0.83
SRF-201ENST00000265354 ANK3Q12955 4377 aaKnown RBP9.8□□□□□ -0.84
SRF-201ENST00000265354 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
SRF-201ENST00000265354 A8MUU9 505 aa9.72□□□□□ -0.85
SRF-201ENST00000265354 KRTAP13-2Q52LG2 175 aa9.72□□□□□ -0.85
SRF-201ENST00000265354 J3QL48 77 aa9.71□□□□□ -0.86
SRF-201ENST00000265354 MEGF8Q7Z7M0 2845 aa9.7□□□□□ -0.86
SRF-201ENST00000265354 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
SRF-201ENST00000265354 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
SRF-201ENST00000265354 COX6B2Q6YFQ2 88 aa9.59□□□□□ -0.87
SRF-201ENST00000265354 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
SRF-201ENST00000265354 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
SRF-201ENST00000265354 Q6ZSA8 131 aa9.45□□□□□ -0.9
SRF-201ENST00000265354 KRTAP13-3Q3SY46 172 aa9.38□□□□□ -0.91
SRF-201ENST00000265354 H0YAA0 97 aa9.34□□□□□ -0.91
SRF-201ENST00000265354 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
SRF-201ENST00000265354 S4R3F8 94 aa9.31□□□□□ -0.92
SRF-201ENST00000265354 Q5VSD8 79 aa9.27□□□□□ -0.93
SRF-201ENST00000265354 CAMK2N1Q7Z7J9 78 aa9.23□□□□□ -0.93
SRF-201ENST00000265354 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
SRF-201ENST00000265354 P0C880 135 aa9.11□□□□□ -0.95
SRF-201ENST00000265354 R4GN34 69 aa9.09□□□□□ -0.95
SRF-201ENST00000265354 HUWE1Q7Z6Z7 4374 aaKnown RBP9.07□□□□□ -0.96
SRF-201ENST00000265354 M0R2T5 61 aa9.06□□□□□ -0.96
SRF-201ENST00000265354 M0QZ58 72 aa9.05□□□□□ -0.96
SRF-201ENST00000265354 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
SRF-201ENST00000265354 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
SRF-201ENST00000265354 ANK2Q01484 3957 aa8.92□□□□□ -0.98
SRF-201ENST00000265354 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
SRF-201ENST00000265354 SEC61BP60468 96 aaKnown RBP8.86□□□□□ -0.99
SRF-201ENST00000265354 PLECQ15149 4684 aaKnown RBP8.85□□□□□ -0.99
SRF-201ENST00000265354 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
SRF-201ENST00000265354 LYSTQ99698 3801 aa8.84□□□□□ -0.99
SRF-201ENST00000265354 KRTAP10-8P60410 259 aa8.8□□□□□ -1
SRF-201ENST00000265354 XP32Q5T750 250 aa8.76□□□□□ -1.01
SRF-201ENST00000265354 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
SRF-201ENST00000265354 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.01
SRF-201ENST00000265354 DNAH9Q9NYC9 4486 aa8.69□□□□□ -1.02
SRF-201ENST00000265354 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
SRF-201ENST00000265354 DNAH1Q9P2D7 4330 aa8.66□□□□□ -1.02
SRF-201ENST00000265354 DNAH8Q96JB1 4490 aa8.65□□□□□ -1.02
SRF-201ENST00000265354 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.04
SRF-201ENST00000265354 FRAS1Q86XX4 4008 aa8.58□□□□□ -1.04
SRF-201ENST00000265354 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
SRF-201ENST00000265354 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
SRF-201ENST00000265354 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
SRF-201ENST00000265354 KRTAP21-3Q3LHN1 58 aa8.49□□□□□ -1.05
SRF-201ENST00000265354 KRTAP15-1Q3LI76 137 aa8.48□□□□□ -1.05
SRF-201ENST00000265354 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
SRF-201ENST00000265354 FAT1Q14517 4588 aa8.46□□□□□ -1.06
SRF-201ENST00000265354 DNHD1Q96M86 4753 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms