RNA–Protein interactions for RNA: ENST00000264705.8

CAD-201, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAD, Length 7,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-201ENST00000264705 NOTCH1P46531 2555 aa6.53□□□□□ -1.36
CAD-201ENST00000264705 SZT2Q5T011 3432 aa6.53□□□□□ -1.36
CAD-201ENST00000264705 DSPP15924 2871 aaKnown RBP6.48□□□□□ -1.37
CAD-201ENST00000264705 NSD1Q96L73 2696 aaPredicted RBP6.47□□□□□ -1.37
CAD-201ENST00000264705 COL6A3P12111 3177 aa6.44□□□□□ -1.38
CAD-201ENST00000264705 APCP25054 2843 aa6.41□□□□□ -1.38
CAD-201ENST00000264705 H0YAA0 97 aa6.41□□□□□ -1.38
CAD-201ENST00000264705 VPS13AQ96RL7 3174 aa6.41□□□□□ -1.38
CAD-201ENST00000264705 UBR5O95071 2799 aaPredicted RBP6.39□□□□□ -1.39
CAD-201ENST00000264705 KRTAP13-3Q3SY46 172 aa6.39□□□□□ -1.39
CAD-201ENST00000264705 MAP1AP78559 2803 aaPredicted RBP6.38□□□□□ -1.39
CAD-201ENST00000264705 USP34Q70CQ2 3546 aa6.37□□□□□ -1.39
CAD-201ENST00000264705 KALRNO60229 2985 aa6.36□□□□□ -1.39
CAD-201ENST00000264705 SPEGQ15772 3267 aa6.34□□□□□ -1.39
CAD-201ENST00000264705 LRBAP50851 2863 aa6.33□□□□□ -1.4
CAD-201ENST00000264705 UTP20O75691 2785 aaKnown RBP6.32□□□□□ -1.4
CAD-201ENST00000264705 ITPR1Q14643 2758 aa6.31□□□□□ -1.4
CAD-201ENST00000264705 CFAP47Q6ZTR5 3102 aa6.3□□□□□ -1.4
CAD-201ENST00000264705 VCANP13611 3396 aa6.27□□□□□ -1.41
CAD-201ENST00000264705 LAMA1P25391 3075 aa6.25□□□□□ -1.41
CAD-201ENST00000264705 HIVEP1P15822 2718 aa6.23□□□□□ -1.41
CAD-201ENST00000264705 TACC2O95359 2948 aa6.18□□□□□ -1.42
CAD-201ENST00000264705 ATMQ13315 3056 aa6.18□□□□□ -1.42
CAD-201ENST00000264705 SPTBN5Q9NRC6 3674 aaKnown RBP6.18□□□□□ -1.42
CAD-201ENST00000264705 DMXL2Q8TDJ6 3036 aa6.18□□□□□ -1.42
CAD-201ENST00000264705 MYO15AQ9UKN7 3530 aa6.17□□□□□ -1.42
CAD-201ENST00000264705 COL12A1Q99715 3063 aa6.17□□□□□ -1.42
CAD-201ENST00000264705 FRYLO94915 3013 aa6.15□□□□□ -1.42
CAD-201ENST00000264705 ASH1LQ9NR48 2969 aaKnown RBP6.14□□□□□ -1.43
CAD-201ENST00000264705 BOD1L1Q8NFC6 3051 aa6.12□□□□□ -1.43
CAD-201ENST00000264705 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
CAD-201ENST00000264705 EYSQ5T1H1 3165 aa6.1□□□□□ -1.43
CAD-201ENST00000264705 TENM4Q6N022 2769 aa6.09□□□□□ -1.43
CAD-201ENST00000264705 ADGRG4Q8IZF6 3080 aa6.09□□□□□ -1.43
CAD-201ENST00000264705 ASPMQ8IZT6 3477 aa6.07□□□□□ -1.44
CAD-201ENST00000264705 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
CAD-201ENST00000264705 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
CAD-201ENST00000264705 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
CAD-201ENST00000264705 FLNCQ14315 2725 aa6.02□□□□□ -1.45
CAD-201ENST00000264705 CELSR2Q9HCU4 2923 aa6.01□□□□□ -1.45
CAD-201ENST00000264705 DCHS1Q96JQ0 3298 aa6.01□□□□□ -1.45
CAD-201ENST00000264705 ZZEF1O43149 2961 aa6□□□□□ -1.45
CAD-201ENST00000264705 NBPF19A0A087WUL8 3843 aa5.98□□□□□ -1.45
CAD-201ENST00000264705 NBEAQ8NFP9 2946 aa5.98□□□□□ -1.45
CAD-201ENST00000264705 WDFY3Q8IZQ1 3526 aa5.96□□□□□ -1.46
CAD-201ENST00000264705 TENM1Q9UKZ4 2725 aa5.95□□□□□ -1.46
CAD-201ENST00000264705 DCHS2Q6V1P9 2916 aa5.95□□□□□ -1.46
CAD-201ENST00000264705 TNRC18O15417 2968 aaPredicted RBP5.94□□□□□ -1.46
CAD-201ENST00000264705 NIPBLQ6KC79 2804 aaeCLIP5.94□□□□□ -1.463e-7■□□□□ 9.7
CAD-201ENST00000264705 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
CAD-201ENST00000264705 TENM2Q9NT68 2774 aa5.92□□□□□ -1.46
CAD-201ENST00000264705 LOC400499M0QZD8 3231 aa5.88□□□□□ -1.47
CAD-201ENST00000264705 CELSR1Q9NYQ6 3014 aa5.87□□□□□ -1.47
CAD-201ENST00000264705 HRNRQ86YZ3 2850 aaPredicted RBP5.86□□□□□ -1.47
CAD-201ENST00000264705 TGP01266 2768 aa5.84□□□□□ -1.47
CAD-201ENST00000264705 DMXL1Q9Y485 3027 aa5.84□□□□□ -1.48
CAD-201ENST00000264705 NF1P21359 2839 aa5.81□□□□□ -1.48
CAD-201ENST00000264705 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
CAD-201ENST00000264705 LAMA5O15230 3695 aa5.77□□□□□ -1.49
CAD-201ENST00000264705 ZANQ9Y493 2812 aa5.76□□□□□ -1.49
CAD-201ENST00000264705 FBN2P35556 2912 aa5.74□□□□□ -1.49
CAD-201ENST00000264705 TENM3Q9P273 2699 aa5.74□□□□□ -1.49
CAD-201ENST00000264705 DMDP11532 3685 aa5.74□□□□□ -1.49
CAD-201ENST00000264705 ZFHX4Q86UP3 3567 aa5.73□□□□□ -1.49
CAD-201ENST00000264705 CSMD1Q96PZ7 3565 aa5.71□□□□□ -1.5
CAD-201ENST00000264705 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
CAD-201ENST00000264705 KRTAP10-6P60371 365 aaPredicted RBP5.64□□□□□ -1.51
CAD-201ENST00000264705 RELNP78509 3460 aa5.63□□□□□ -1.51
CAD-201ENST00000264705 PKD1L1Q8TDX9 2849 aa5.6□□□□□ -1.51
CAD-201ENST00000264705 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
CAD-201ENST00000264705 VWFP04275 2813 aa5.58□□□□□ -1.52
CAD-201ENST00000264705 PDZD2O15018 2839 aa5.56□□□□□ -1.52
CAD-201ENST00000264705 MXRA5Q9NR99 2828 aa5.55□□□□□ -1.52
CAD-201ENST00000264705 KRTAP4-5Q9BYR2 181 aa5.54□□□□□ -1.52
CAD-201ENST00000264705 ANK3Q12955 4377 aaKnown RBP5.54□□□□□ -1.52
CAD-201ENST00000264705 SPENQ96T58 3664 aaKnown RBP5.51□□□□□ -1.53
CAD-201ENST00000264705 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
CAD-201ENST00000264705 INE1O15225 51 aa5.46□□□□□ -1.53
CAD-201ENST00000264705 ZFHX3Q15911 3703 aa5.46□□□□□ -1.54
CAD-201ENST00000264705 MUC3AQ02505 3323 aa5.45□□□□□ -1.54
CAD-201ENST00000264705 SMG1Q96Q15 3661 aaKnown RBP5.44□□□□□ -1.54
CAD-201ENST00000264705 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
CAD-201ENST00000264705 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
CAD-201ENST00000264705 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
CAD-201ENST00000264705 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
CAD-201ENST00000264705 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
CAD-201ENST00000264705 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
CAD-201ENST00000264705 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
CAD-201ENST00000264705 HUWE1Q7Z6Z7 4374 aaKnown RBP5.36□□□□□ -1.55
CAD-201ENST00000264705 SVEP1Q4LDE5 3571 aa5.33□□□□□ -1.56
CAD-201ENST00000264705 KRTAP10-4P60372 401 aaPredicted RBP5.32□□□□□ -1.56
CAD-201ENST00000264705 CUBNO60494 3623 aa5.32□□□□□ -1.56
CAD-201ENST00000264705 MEGF8Q7Z7M0 2845 aa5.27□□□□□ -1.57
CAD-201ENST00000264705 CSMD2Q7Z408 3487 aa5.26□□□□□ -1.57
CAD-201ENST00000264705 FBN1P35555 2871 aaKnown RBP5.24□□□□□ -1.57
CAD-201ENST00000264705 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
CAD-201ENST00000264705 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
CAD-201ENST00000264705 OTOGQ6ZRI0 2925 aa5.23□□□□□ -1.57
CAD-201ENST00000264705 TRRAPQ9Y4A5 3859 aa5.21□□□□□ -1.58
CAD-201ENST00000264705 BSNQ9UPA5 3926 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms