RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 VCANP13611 3396 aa10.38□□□□□ -0.75
NECTIN1-201ENST00000264025 TACC2O95359 2948 aa10.36□□□□□ -0.75
NECTIN1-201ENST00000264025 APCP25054 2843 aa10.33□□□□□ -0.76
NECTIN1-201ENST00000264025 DNAH14Q0VDD8 3507 aa10.33□□□□□ -0.76
NECTIN1-201ENST00000264025 XP32Q5T750 250 aa10.33□□□□□ -0.76
NECTIN1-201ENST00000264025 COL12A1Q99715 3063 aa10.33□□□□□ -0.76
NECTIN1-201ENST00000264025 UTP20O75691 2785 aaKnown RBP10.33□□□□□ -0.76
NECTIN1-201ENST00000264025 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
NECTIN1-201ENST00000264025 LRBAP50851 2863 aa10.31□□□□□ -0.76
NECTIN1-201ENST00000264025 PP632Q6XCG6 107 aa10.3□□□□□ -0.76
NECTIN1-201ENST00000264025 FRYLO94915 3013 aa10.28□□□□□ -0.76
NECTIN1-201ENST00000264025 ADGRG4Q8IZF6 3080 aa10.28□□□□□ -0.76
NECTIN1-201ENST00000264025 NBEAQ8NFP9 2946 aa10.26□□□□□ -0.77
NECTIN1-201ENST00000264025 BOD1L1Q8NFC6 3051 aa10.25□□□□□ -0.77
NECTIN1-201ENST00000264025 KRTAP10-8P60410 259 aa10.25□□□□□ -0.77
NECTIN1-201ENST00000264025 HIVEP1P15822 2718 aa10.23□□□□□ -0.77
NECTIN1-201ENST00000264025 DMXL2Q8TDJ6 3036 aa10.23□□□□□ -0.77
NECTIN1-201ENST00000264025 COL6A3P12111 3177 aa10.22□□□□□ -0.77
NECTIN1-201ENST00000264025 TENM4Q6N022 2769 aa10.18□□□□□ -0.78
NECTIN1-201ENST00000264025 A0A1B0GVY2 172 aa10.17□□□□□ -0.78
NECTIN1-201ENST00000264025 ASH1LQ9NR48 2969 aaKnown RBP10.15□□□□□ -0.79
NECTIN1-201ENST00000264025 TPRXLQ17RH7 258 aa10.13□□□□□ -0.79
NECTIN1-201ENST00000264025 NIPBLQ6KC79 2804 aaeCLIP10.13□□□□□ -0.79
NECTIN1-201ENST00000264025 REV3LO60673 3130 aa10.13□□□□□ -0.79
NECTIN1-201ENST00000264025 H0YAA0 97 aa10.13□□□□□ -0.79
NECTIN1-201ENST00000264025 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
NECTIN1-201ENST00000264025 ZZEF1O43149 2961 aa10.04□□□□□ -0.8
NECTIN1-201ENST00000264025 P0C880 135 aa10.02□□□□□ -0.8
NECTIN1-201ENST00000264025 CRYBG3Q68DQ2 2970 aa10.02□□□□□ -0.8
NECTIN1-201ENST00000264025 KRTAP10-10P60014 251 aa9.99□□□□□ -0.81
NECTIN1-201ENST00000264025 CFAP47Q6ZTR5 3102 aa9.99□□□□□ -0.81
NECTIN1-201ENST00000264025 CELSR2Q9HCU4 2923 aa9.99□□□□□ -0.81
NECTIN1-201ENST00000264025 SPTBN5Q9NRC6 3674 aaKnown RBP9.98□□□□□ -0.81
NECTIN1-201ENST00000264025 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
NECTIN1-201ENST00000264025 PRO2289Q9P1D8 64 aa9.93□□□□□ -0.82
NECTIN1-201ENST00000264025 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
NECTIN1-201ENST00000264025 ZANQ9Y493 2812 aa9.89□□□□□ -0.83
NECTIN1-201ENST00000264025 USP34Q70CQ2 3546 aa9.89□□□□□ -0.83
NECTIN1-201ENST00000264025 DCHS2Q6V1P9 2916 aa9.88□□□□□ -0.83
NECTIN1-201ENST00000264025 HRNRQ86YZ3 2850 aaPredicted RBP9.85□□□□□ -0.83
NECTIN1-201ENST00000264025 DMXL1Q9Y485 3027 aa9.8□□□□□ -0.84
NECTIN1-201ENST00000264025 SPEGQ15772 3267 aa9.75□□□□□ -0.85
NECTIN1-201ENST00000264025 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
NECTIN1-201ENST00000264025 TENM1Q9UKZ4 2725 aa9.69□□□□□ -0.86
NECTIN1-201ENST00000264025 FBN2P35556 2912 aa9.66□□□□□ -0.86
NECTIN1-201ENST00000264025 LOC400499M0QZD8 3231 aa9.62□□□□□ -0.87
NECTIN1-201ENST00000264025 NF1P21359 2839 aa9.61□□□□□ -0.87
NECTIN1-201ENST00000264025 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
NECTIN1-201ENST00000264025 TGP01266 2768 aa9.55□□□□□ -0.88
NECTIN1-201ENST00000264025 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
NECTIN1-201ENST00000264025 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
NECTIN1-201ENST00000264025 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
NECTIN1-201ENST00000264025 MYO15AQ9UKN7 3530 aa9.39□□□□□ -0.91
NECTIN1-201ENST00000264025 MXRA5Q9NR99 2828 aa9.36□□□□□ -0.91
NECTIN1-201ENST00000264025 KRTAP12-1P59990 96 aa9.36□□□□□ -0.91
NECTIN1-201ENST00000264025 RELNP78509 3460 aa9.28□□□□□ -0.92
NECTIN1-201ENST00000264025 WDFY3Q8IZQ1 3526 aa9.26□□□□□ -0.93
NECTIN1-201ENST00000264025 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
NECTIN1-201ENST00000264025 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
NECTIN1-201ENST00000264025 PDZD2O15018 2839 aa9.2□□□□□ -0.94
NECTIN1-201ENST00000264025 DCHS1Q96JQ0 3298 aa9.13□□□□□ -0.95
NECTIN1-201ENST00000264025 VWFP04275 2813 aa9.11□□□□□ -0.95
NECTIN1-201ENST00000264025 KRTAP15-1Q3LI76 137 aa9.1□□□□□ -0.95
NECTIN1-201ENST00000264025 ASPMQ8IZT6 3477 aa9.09□□□□□ -0.95
NECTIN1-201ENST00000264025 ZFHX4Q86UP3 3567 aa9.03□□□□□ -0.96
NECTIN1-201ENST00000264025 KRTAP10-6P60371 365 aaPredicted RBP9.01□□□□□ -0.97
NECTIN1-201ENST00000264025 LAMA5O15230 3695 aa8.99□□□□□ -0.97
NECTIN1-201ENST00000264025 NBPF19A0A087WUL8 3843 aa8.99□□□□□ -0.97
NECTIN1-201ENST00000264025 OTOGQ6ZRI0 2925 aa8.89□□□□□ -0.99
NECTIN1-201ENST00000264025 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
NECTIN1-201ENST00000264025 FBN1P35555 2871 aaKnown RBP8.85□□□□□ -0.99
NECTIN1-201ENST00000264025 CSMD1Q96PZ7 3565 aa8.84□□□□□ -0.99
NECTIN1-201ENST00000264025 MT1HL1P0DM35 61 aa8.76□□□□□ -1.01
NECTIN1-201ENST00000264025 DMDP11532 3685 aa8.76□□□□□ -1.01
NECTIN1-201ENST00000264025 SMG1Q96Q15 3661 aaKnown RBP8.74□□□□□ -1.01
NECTIN1-201ENST00000264025 SRRM2Q9UQ35 2752 aaKnown RBP8.71□□□□□ -1.02
NECTIN1-201ENST00000264025 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
NECTIN1-201ENST00000264025 KRTAP10-12P60413 245 aa8.67□□□□□ -1.02
NECTIN1-201ENST00000264025 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
NECTIN1-201ENST00000264025 FBN3Q75N90 2809 aa8.65□□□□□ -1.03
NECTIN1-201ENST00000264025 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
NECTIN1-201ENST00000264025 INE1O15225 51 aa8.61□□□□□ -1.03
NECTIN1-201ENST00000264025 MEGF8Q7Z7M0 2845 aa8.59□□□□□ -1.03
NECTIN1-201ENST00000264025 SVEP1Q4LDE5 3571 aa8.54□□□□□ -1.04
NECTIN1-201ENST00000264025 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
NECTIN1-201ENST00000264025 MUC3AQ02505 3323 aa8.51□□□□□ -1.05
NECTIN1-201ENST00000264025 CSMD2Q7Z408 3487 aa8.48□□□□□ -1.05
NECTIN1-201ENST00000264025 TRRAPQ9Y4A5 3859 aa8.47□□□□□ -1.05
NECTIN1-201ENST00000264025 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
NECTIN1-201ENST00000264025 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
NECTIN1-201ENST00000264025 SPENQ96T58 3664 aaKnown RBP8.42□□□□□ -1.06
NECTIN1-201ENST00000264025 KRTAP12-3P60328 96 aa8.42□□□□□ -1.06
NECTIN1-201ENST00000264025 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
NECTIN1-201ENST00000264025 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
NECTIN1-201ENST00000264025 KRTAP23-1A1A580 65 aa8.34□□□□□ -1.07
NECTIN1-201ENST00000264025 CUBNO60494 3623 aa8.29□□□□□ -1.08
NECTIN1-201ENST00000264025 LCE3AQ5TA76 89 aa8.28□□□□□ -1.08
NECTIN1-201ENST00000264025 BSNQ9UPA5 3926 aa8.26□□□□□ -1.09
NECTIN1-201ENST00000264025 ALMS1Q8TCU4 4167 aa8.15□□□□□ -1.1
NECTIN1-201ENST00000264025 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms