RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 OXTP01178 125 aa13.52□□□□□ -0.25
EPCAM-201ENST00000263735 IGHV6-1A0A0B4J1U7 121 aa13.51□□□□□ -0.25
EPCAM-201ENST00000263735 MMP24-AS1A0A0U1RRL7 71 aa13.49□□□□□ -0.25
EPCAM-201ENST00000263735 MT1HL1P0DM35 61 aa13.49□□□□□ -0.25
EPCAM-201ENST00000263735 ANAPC13Q9BS18 74 aa13.48□□□□□ -0.25
EPCAM-201ENST00000263735 C8orf17Q9NRJ1 99 aa13.48□□□□□ -0.25
EPCAM-201ENST00000263735 WFDC13Q8IUB5 93 aa13.47□□□□□ -0.25
EPCAM-201ENST00000263735 CASC2Q6XLA1 102 aa13.46□□□□□ -0.25
EPCAM-201ENST00000263735 KRTAP29-1A8MX34 341 aaPredicted RBP13.45□□□□□ -0.26
EPCAM-201ENST00000263735 PCP4P48539 62 aa13.44□□□□□ -0.26
EPCAM-201ENST00000263735 MYCBP2O75592 4640 aa13.44□□□□□ -0.26
EPCAM-201ENST00000263735 C8orf87E5RJ46 101 aa13.44□□□□□ -0.26
EPCAM-201ENST00000263735 hDV103S1A0JD37 113 aa13.42□□□□□ -0.26
EPCAM-201ENST00000263735 SMIM20Q8N5G0 67 aa13.42□□□□□ -0.26
EPCAM-201ENST00000263735 HERC2O95714 4834 aa13.39□□□□□ -0.27
EPCAM-201ENST00000263735 NOTCH2NLQ7Z3S9 236 aa13.39□□□□□ -0.27
EPCAM-201ENST00000263735 LINC00313P59037 77 aa13.36□□□□□ -0.27
EPCAM-201ENST00000263735 SERP2Q8N6R1 65 aa13.36□□□□□ -0.27
EPCAM-201ENST00000263735 TMEM254Q8TBM7 123 aa13.36□□□□□ -0.27
EPCAM-201ENST00000263735 DMBT1Q9UGM3 2413 aaPredicted RBP13.35□□□□□ -0.27
EPCAM-201ENST00000263735 RETNLBQ9BQ08 111 aa13.35□□□□□ -0.27
EPCAM-201ENST00000263735 TRAV7A0A075B6U4 112 aa13.34□□□□□ -0.27
EPCAM-201ENST00000263735 OCR1Q9BZK8 76 aa13.34□□□□□ -0.27
EPCAM-201ENST00000263735 MRPL34Q9BQ48 92 aaKnown RBP13.32□□□□□ -0.28
EPCAM-201ENST00000263735 COX7CP15954 63 aa13.29□□□□□ -0.28
EPCAM-201ENST00000263735 ABCA13Q86UQ4 5058 aa13.26□□□□□ -0.29
EPCAM-201ENST00000263735 FP248Q71RG6 208 aaPredicted RBP13.26□□□□□ -0.29
EPCAM-201ENST00000263735 UQCRQO14949 82 aa13.25□□□□□ -0.29
EPCAM-201ENST00000263735 KRTAP16-1A8MUX0 517 aa13.23□□□□□ -0.29
EPCAM-201ENST00000263735 TP53AIP1Q9HCN2 124 aa13.21□□□□□ -0.3
EPCAM-201ENST00000263735 NDUFS5O43920 106 aa13.2□□□□□ -0.3
EPCAM-201ENST00000263735 Q8N9P0 234 aaPredicted RBP13.19□□□□□ -0.3
EPCAM-201ENST00000263735 CCDC179H3BU77 68 aa13.16□□□□□ -0.3
EPCAM-201ENST00000263735 J3QL48 77 aa13.16□□□□□ -0.3
EPCAM-201ENST00000263735 C9orf92A6NGG3 77 aa13.13□□□□□ -0.31
EPCAM-201ENST00000263735 C5orf47Q569G3 176 aa13.13□□□□□ -0.31
EPCAM-201ENST00000263735 IGLV7-46A0A075B6I9 117 aa13.1□□□□□ -0.31
EPCAM-201ENST00000263735 C20orf197Q8N268 126 aa13.09□□□□□ -0.31
EPCAM-201ENST00000263735 TRAV22A0A0B4J277 110 aa13.08□□□□□ -0.32
EPCAM-201ENST00000263735 H0Y9P7 68 aa13.05□□□□□ -0.32
EPCAM-201ENST00000263735 MP68P56378 58 aa13.05□□□□□ -0.32
EPCAM-201ENST00000263735 KLKP1Q107X0 134 aa13.04□□□□□ -0.32
EPCAM-201ENST00000263735 PRR4Q16378 134 aa13.04□□□□□ -0.32
EPCAM-201ENST00000263735 C20orf166-AS1Q96NR2 134 aa13.02□□□□□ -0.32
EPCAM-201ENST00000263735 A0A0U1RQV1 116 aa13.01□□□□□ -0.33
EPCAM-201ENST00000263735 KRTAP13-3Q3SY46 172 aa13.01□□□□□ -0.33
EPCAM-201ENST00000263735 A8MUU9 505 aa13□□□□□ -0.33
EPCAM-201ENST00000263735 H3BPC8 53 aa13□□□□□ -0.33
EPCAM-201ENST00000263735 SNURFQ9Y675 71 aa12.99□□□□□ -0.33
EPCAM-201ENST00000263735 Q5W150 140 aa12.96□□□□□ -0.33
EPCAM-201ENST00000263735 LINC00208Q96KT6 92 aa12.95□□□□□ -0.34
EPCAM-201ENST00000263735 TPRXLQ17RH7 258 aa12.93□□□□□ -0.34
EPCAM-201ENST00000263735 ZCCHC13Q8WW36 166 aaKnown RBP12.93□□□□□ -0.34
EPCAM-201ENST00000263735 Q75L30 129 aa12.93□□□□□ -0.34
EPCAM-201ENST00000263735 CYSTM1Q9H1C7 97 aa12.92□□□□□ -0.34
EPCAM-201ENST00000263735 C1orf64Q8NEQ6 169 aa12.91□□□□□ -0.34
EPCAM-201ENST00000263735 XP32Q5T750 250 aa12.88□□□□□ -0.35
EPCAM-201ENST00000263735 NDUFC1O43677 76 aa12.88□□□□□ -0.35
EPCAM-201ENST00000263735 PCLOQ9Y6V0 5065 aa12.85□□□□□ -0.35
EPCAM-201ENST00000263735 LOC101927531A0A1B0GV80 90 aa12.85□□□□□ -0.35
EPCAM-201ENST00000263735 H7BZZ5 65 aa12.82□□□□□ -0.36
EPCAM-201ENST00000263735 RPL37P61927 97 aaKnown RBP12.81□□□□□ -0.36
EPCAM-201ENST00000263735 IGKV2-30P06310 120 aa12.76□□□□□ -0.37
EPCAM-201ENST00000263735 TMEM258P61165 79 aa12.74□□□□□ -0.37
EPCAM-201ENST00000263735 ATP11AUNQ6ZP68 121 aa12.74□□□□□ -0.37
EPCAM-201ENST00000263735 CYP4F30PQ9H0H9 118 aa12.74□□□□□ -0.37
EPCAM-201ENST00000263735 IGKV2D-30A0A075B6S6 120 aa12.68□□□□□ -0.38
EPCAM-201ENST00000263735 C7orf65Q6ZTY9 151 aa12.68□□□□□ -0.38
EPCAM-201ENST00000263735 PCOTHQ58A44 107 aa12.67□□□□□ -0.38
EPCAM-201ENST00000263735 LPAP08519 4548 aa12.64□□□□□ -0.39
EPCAM-201ENST00000263735 FAM236DA0A1B0GTK5 79 aa12.6□□□□□ -0.39
EPCAM-201ENST00000263735 FAM236CP0DP71 79 aa12.6□□□□□ -0.39
EPCAM-201ENST00000263735 SPANXA2-OT1Q8N9U9 137 aa12.6□□□□□ -0.39
EPCAM-201ENST00000263735 ATP5EP56381 51 aaPredicted RBP12.59□□□□□ -0.39
EPCAM-201ENST00000263735 LRP2P98164 4655 aa12.56□□□□□ -0.4
EPCAM-201ENST00000263735 SPINK7P58062 85 aa12.55□□□□□ -0.4
EPCAM-201ENST00000263735 HRES1P13985 223 aa12.52□□□□□ -0.41
EPCAM-201ENST00000263735 HERC1Q15751 4861 aa12.49□□□□□ -0.41
EPCAM-201ENST00000263735 SEC61BP60468 96 aaKnown RBP12.47□□□□□ -0.41
EPCAM-201ENST00000263735 HMCN2Q8NDA2 5059 aa12.36□□□□□ -0.43
EPCAM-201ENST00000263735 C4orf26Q17RF5 130 aa12.35□□□□□ -0.43
EPCAM-201ENST00000263735 DMAC1Q96GE9 116 aa12.34□□□□□ -0.43
EPCAM-201ENST00000263735 SERP1Q9Y6X1 66 aa12.32□□□□□ -0.44
EPCAM-201ENST00000263735 A8MUN3 132 aa12.26□□□□□ -0.45
EPCAM-201ENST00000263735 ACYP2P14621 99 aa12.26□□□□□ -0.45
EPCAM-201ENST00000263735 RPS28P62857 69 aaKnown RBP12.25□□□□□ -0.45
EPCAM-201ENST00000263735 MUC17Q685J3 4493 aa12.25□□□□□ -0.45
EPCAM-201ENST00000263735 COX6B2Q6YFQ2 88 aa12.24□□□□□ -0.45
EPCAM-201ENST00000263735 COA5Q86WW8 74 aa12.2□□□□□ -0.46
EPCAM-201ENST00000263735 KRTAP3-1Q9BYR8 98 aa12.17□□□□□ -0.46
EPCAM-201ENST00000263735 MPLKIPQ8TAP9 179 aa12.17□□□□□ -0.46
EPCAM-201ENST00000263735 KRTAP4-1Q9BYQ7 146 aa12.15□□□□□ -0.46
EPCAM-201ENST00000263735 RBM12B-AS1Q9P1G2 102 aa12.12□□□□□ -0.47
EPCAM-201ENST00000263735 CHKB-CPT1BH3BT56 60 aa12.06□□□□□ -0.48
EPCAM-201ENST00000263735 SMIM26A0A096LP01 95 aa11.98□□□□□ -0.49
EPCAM-201ENST00000263735 H1FX-AS1Q4G0G2 97 aa11.97□□□□□ -0.49
EPCAM-201ENST00000263735 S4R3F8 94 aa11.87□□□□□ -0.51
EPCAM-201ENST00000263735 SPTSSBQ8NFR3 76 aa11.86□□□□□ -0.51
EPCAM-201ENST00000263735 KRTAP19-2Q3LHN2 52 aa11.84□□□□□ -0.51
EPCAM-201ENST00000263735 LCA10Q71F78 164 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms