RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 CELSR2Q9HCU4 2923 aa11.21□□□□□ -0.61
FAM20B-201ENST00000263733 EYSQ5T1H1 3165 aa11.19□□□□□ -0.62
FAM20B-201ENST00000263733 SPTBN5Q9NRC6 3674 aaKnown RBP11.17□□□□□ -0.62
FAM20B-201ENST00000263733 M0QZ58 72 aa11.14□□□□□ -0.63
FAM20B-201ENST00000263733 MYO15AQ9UKN7 3530 aa11.13□□□□□ -0.63
FAM20B-201ENST00000263733 A0A0A0MQY5 61 aa11.12□□□□□ -0.63
FAM20B-201ENST00000263733 M0R2T5 61 aa11.12□□□□□ -0.63
FAM20B-201ENST00000263733 USP34Q70CQ2 3546 aa11.1□□□□□ -0.63
FAM20B-201ENST00000263733 ZANQ9Y493 2812 aa11.08□□□□□ -0.64
FAM20B-201ENST00000263733 KRTAP25-1Q3LHN0 102 aa11.08□□□□□ -0.64
FAM20B-201ENST00000263733 Q5VSD8 79 aa11.06□□□□□ -0.64
FAM20B-201ENST00000263733 Q6ZRN7 208 aaPredicted RBP11.06□□□□□ -0.64
FAM20B-201ENST00000263733 LOC400499M0QZD8 3231 aa11.06□□□□□ -0.64
FAM20B-201ENST00000263733 KRTAP13-1Q8IUC0 172 aa11.05□□□□□ -0.64
FAM20B-201ENST00000263733 DCHS2Q6V1P9 2916 aa11□□□□□ -0.65
FAM20B-201ENST00000263733 DMXL1Q9Y485 3027 aa11□□□□□ -0.65
FAM20B-201ENST00000263733 KRTAP13-2Q52LG2 175 aa10.99□□□□□ -0.65
FAM20B-201ENST00000263733 NIPBLQ6KC79 2804 aaeCLIP10.98□□□□□ -0.65
FAM20B-201ENST00000263733 TNRC18O15417 2968 aaPredicted RBP10.96□□□□□ -0.65
FAM20B-201ENST00000263733 CRYBG3Q68DQ2 2970 aa10.96□□□□□ -0.65
FAM20B-201ENST00000263733 SEC61BP60468 96 aaKnown RBP10.92□□□□□ -0.66
FAM20B-201ENST00000263733 FBN2P35556 2912 aa10.91□□□□□ -0.66
FAM20B-201ENST00000263733 KMT2BQ9UMN6 2715 aaPredicted RBP10.9□□□□□ -0.67
FAM20B-201ENST00000263733 HRNRQ86YZ3 2850 aaPredicted RBP10.87□□□□□ -0.67
FAM20B-201ENST00000263733 WDFY3Q8IZQ1 3526 aa10.83□□□□□ -0.68
FAM20B-201ENST00000263733 NDUFAF8A1L188 74 aa10.82□□□□□ -0.68
FAM20B-201ENST00000263733 KRTAP16-1A8MUX0 517 aa10.82□□□□□ -0.68
FAM20B-201ENST00000263733 NF1P21359 2839 aa10.8□□□□□ -0.68
FAM20B-201ENST00000263733 RPS29P62273 56 aaKnown RBP10.75□□□□□ -0.69
FAM20B-201ENST00000263733 A8MUU9 505 aa10.72□□□□□ -0.69
FAM20B-201ENST00000263733 DCHS1Q96JQ0 3298 aa10.72□□□□□ -0.69
FAM20B-201ENST00000263733 TENM4Q6N022 2769 aa10.68□□□□□ -0.7
FAM20B-201ENST00000263733 PLAC4Q8WY50 150 aa10.6□□□□□ -0.71
FAM20B-201ENST00000263733 RELNP78509 3460 aa10.59□□□□□ -0.71
FAM20B-201ENST00000263733 ZFHX4Q86UP3 3567 aa10.57□□□□□ -0.72
FAM20B-201ENST00000263733 C10orf95Q9H7T3 257 aa10.55□□□□□ -0.72
FAM20B-201ENST00000263733 H0YAA0 97 aa10.51□□□□□ -0.73
FAM20B-201ENST00000263733 C20orf166-AS1Q96NR2 134 aa10.51□□□□□ -0.73
FAM20B-201ENST00000263733 ASPMQ8IZT6 3477 aa10.49□□□□□ -0.73
FAM20B-201ENST00000263733 CELSR1Q9NYQ6 3014 aa10.47□□□□□ -0.73
FAM20B-201ENST00000263733 MXRA5Q9NR99 2828 aa10.46□□□□□ -0.73
FAM20B-201ENST00000263733 CSMD1Q96PZ7 3565 aa10.43□□□□□ -0.74
FAM20B-201ENST00000263733 KRTAP1-4P0C5Y4 121 aa10.43□□□□□ -0.74
FAM20B-201ENST00000263733 TENM3Q9P273 2699 aa10.4□□□□□ -0.75
FAM20B-201ENST00000263733 TGP01266 2768 aa10.36□□□□□ -0.75
FAM20B-201ENST00000263733 LAMA5O15230 3695 aa10.33□□□□□ -0.76
FAM20B-201ENST00000263733 TENM1Q9UKZ4 2725 aa10.33□□□□□ -0.76
FAM20B-201ENST00000263733 TNP1P09430 55 aa10.26□□□□□ -0.77
FAM20B-201ENST00000263733 XP32Q5T750 250 aa10.21□□□□□ -0.77
FAM20B-201ENST00000263733 SMG1Q96Q15 3661 aaKnown RBP10.2□□□□□ -0.78
FAM20B-201ENST00000263733 PDZD2O15018 2839 aa10.19□□□□□ -0.78
FAM20B-201ENST00000263733 P0C880 135 aa10.14□□□□□ -0.79
FAM20B-201ENST00000263733 KRTAP13-3Q3SY46 172 aa10.13□□□□□ -0.79
FAM20B-201ENST00000263733 PKD1L1Q8TDX9 2849 aa10.12□□□□□ -0.79
FAM20B-201ENST00000263733 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
FAM20B-201ENST00000263733 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
FAM20B-201ENST00000263733 CUBNO60494 3623 aa10.07□□□□□ -0.8
FAM20B-201ENST00000263733 SVEP1Q4LDE5 3571 aa10.06□□□□□ -0.8
FAM20B-201ENST00000263733 DMDP11532 3685 aa10.05□□□□□ -0.8
FAM20B-201ENST00000263733 VWFP04275 2813 aa10.03□□□□□ -0.8
FAM20B-201ENST00000263733 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
FAM20B-201ENST00000263733 PP632Q6XCG6 107 aa10.01□□□□□ -0.81
FAM20B-201ENST00000263733 FBN1P35555 2871 aaKnown RBP9.92□□□□□ -0.82
FAM20B-201ENST00000263733 MUC3AQ02505 3323 aa9.86□□□□□ -0.83
FAM20B-201ENST00000263733 KRTAP12-2P59991 146 aa9.82□□□□□ -0.84
FAM20B-201ENST00000263733 NBPF19A0A087WUL8 3843 aa9.81□□□□□ -0.84
FAM20B-201ENST00000263733 TPRXLQ17RH7 258 aa9.78□□□□□ -0.84
FAM20B-201ENST00000263733 KRTAP3-1Q9BYR8 98 aa9.68□□□□□ -0.86
FAM20B-201ENST00000263733 FBN3Q75N90 2809 aa9.64□□□□□ -0.87
FAM20B-201ENST00000263733 SPENQ96T58 3664 aaKnown RBP9.64□□□□□ -0.87
FAM20B-201ENST00000263733 SRRM2Q9UQ35 2752 aaKnown RBP9.62□□□□□ -0.87
FAM20B-201ENST00000263733 CSMD2Q7Z408 3487 aa9.62□□□□□ -0.87
FAM20B-201ENST00000263733 ZFHX3Q15911 3703 aa9.61□□□□□ -0.87
FAM20B-201ENST00000263733 KRTAP21-3Q3LHN1 58 aa9.6□□□□□ -0.87
FAM20B-201ENST00000263733 KRTAP12-1P59990 96 aa9.6□□□□□ -0.87
FAM20B-201ENST00000263733 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
FAM20B-201ENST00000263733 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
FAM20B-201ENST00000263733 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
FAM20B-201ENST00000263733 MEGF8Q7Z7M0 2845 aa9.5□□□□□ -0.89
FAM20B-201ENST00000263733 KRTAP10-6P60371 365 aaPredicted RBP9.4□□□□□ -0.9
FAM20B-201ENST00000263733 TRRAPQ9Y4A5 3859 aa9.4□□□□□ -0.91
FAM20B-201ENST00000263733 COL7A1Q02388 2944 aa9.36□□□□□ -0.91
FAM20B-201ENST00000263733 ANK3Q12955 4377 aaKnown RBP9.33□□□□□ -0.92
FAM20B-201ENST00000263733 PRO2289Q9P1D8 64 aa9.27□□□□□ -0.93
FAM20B-201ENST00000263733 BSNQ9UPA5 3926 aa9.16□□□□□ -0.94
FAM20B-201ENST00000263733 VPS13CQ709C8 3753 aa9.13□□□□□ -0.95
FAM20B-201ENST00000263733 KRTAP15-1Q3LI76 137 aa9.09□□□□□ -0.95
FAM20B-201ENST00000263733 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
FAM20B-201ENST00000263733 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
FAM20B-201ENST00000263733 CSMD3Q7Z407 3707 aa8.98□□□□□ -0.97
FAM20B-201ENST00000263733 HUWE1Q7Z6Z7 4374 aaKnown RBP8.84□□□□□ -0.99
FAM20B-201ENST00000263733 MT1HL1P0DM35 61 aa8.79□□□□□ -1
FAM20B-201ENST00000263733 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
FAM20B-201ENST00000263733 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
FAM20B-201ENST00000263733 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
FAM20B-201ENST00000263733 INE1O15225 51 aa8.54□□□□□ -1.04
FAM20B-201ENST00000263733 AKAP9Q99996 3911 aa8.49□□□□□ -1.05
FAM20B-201ENST00000263733 KRTAP10-12P60413 245 aa8.48□□□□□ -1.05
FAM20B-201ENST00000263733 KRTAP4-5Q9BYR2 181 aa8.47□□□□□ -1.05
FAM20B-201ENST00000263733 LCE3AQ5TA76 89 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms