RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
TM9SF1-201ENST00000261789 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
TM9SF1-201ENST00000261789 CD164Q04900 197 aa9.7□□□□□ -0.86
TM9SF1-201ENST00000261789 TP53AIP1Q9HCN2 124 aa9.68□□□□□ -0.86
TM9SF1-201ENST00000261789 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
TM9SF1-201ENST00000261789 COA5Q86WW8 74 aa9.66□□□□□ -0.86
TM9SF1-201ENST00000261789 CIRBP-AS1Q8TBR5 109 aa9.66□□□□□ -0.86
TM9SF1-201ENST00000261789 DNAH5Q8TE73 4624 aa9.66□□□□□ -0.86
TM9SF1-201ENST00000261789 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
TM9SF1-201ENST00000261789 MRPL34Q9BQ48 92 aaKnown RBP9.66□□□□□ -0.86
TM9SF1-201ENST00000261789 C1orf134Q5TEV5 83 aa9.65□□□□□ -0.86
TM9SF1-201ENST00000261789 A8MU10 97 aa9.64□□□□□ -0.87
TM9SF1-201ENST00000261789 IGLV7-43P04211 117 aa9.64□□□□□ -0.87
TM9SF1-201ENST00000261789 Q5VV11 94 aa9.63□□□□□ -0.87
TM9SF1-201ENST00000261789 LY6G6CO95867 125 aa9.63□□□□□ -0.87
TM9SF1-201ENST00000261789 V9GYY9 64 aa9.62□□□□□ -0.87
TM9SF1-201ENST00000261789 PRR15LQ9BU68 103 aa9.59□□□□□ -0.87
TM9SF1-201ENST00000261789 Q5W150 140 aa9.59□□□□□ -0.87
TM9SF1-201ENST00000261789 KRTAP10-2P60368 255 aa9.58□□□□□ -0.88
TM9SF1-201ENST00000261789 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
TM9SF1-201ENST00000261789 CHKB-CPT1BH3BT56 60 aa9.56□□□□□ -0.88
TM9SF1-201ENST00000261789 HYDINQ4G0P3 5121 aa9.55□□□□□ -0.88
TM9SF1-201ENST00000261789 LIMD2Q9BT23 127 aa9.55□□□□□ -0.88
TM9SF1-201ENST00000261789 SPAG11AQ6PDA7 123 aa9.53□□□□□ -0.88
TM9SF1-201ENST00000261789 HRES1P13985 223 aa9.52□□□□□ -0.89
TM9SF1-201ENST00000261789 PMAIP1Q13794 54 aa9.51□□□□□ -0.89
TM9SF1-201ENST00000261789 PKD1P98161 4303 aa9.5□□□□□ -0.89
TM9SF1-201ENST00000261789 KRTAP13-3Q3SY46 172 aa9.48□□□□□ -0.89
TM9SF1-201ENST00000261789 RETNLBQ9BQ08 111 aa9.48□□□□□ -0.89
TM9SF1-201ENST00000261789 SEC61GP60059 68 aa9.47□□□□□ -0.89
TM9SF1-201ENST00000261789 SSBP3-AS1Q7Z2R9 100 aa9.47□□□□□ -0.89
TM9SF1-201ENST00000261789 VPS13BQ7Z7G8 4022 aa9.46□□□□□ -0.89
TM9SF1-201ENST00000261789 KRTAP13-2Q52LG2 175 aa9.46□□□□□ -0.89
TM9SF1-201ENST00000261789 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
TM9SF1-201ENST00000261789 FAT2Q9NYQ8 4349 aa9.44□□□□□ -0.9
TM9SF1-201ENST00000261789 KRTAP10-1P60331 282 aa9.43□□□□□ -0.9
TM9SF1-201ENST00000261789 A6NED7 52 aa9.43□□□□□ -0.9
TM9SF1-201ENST00000261789 Q75L30 129 aa9.43□□□□□ -0.9
TM9SF1-201ENST00000261789 LCA10Q71F78 164 aa9.42□□□□□ -0.9
TM9SF1-201ENST00000261789 PRR26Q8N8Z3 221 aa9.42□□□□□ -0.9
TM9SF1-201ENST00000261789 LINC00313P59037 77 aa9.41□□□□□ -0.9
TM9SF1-201ENST00000261789 LINC01558Q9Y6Z2 57 aa9.39□□□□□ -0.91
TM9SF1-201ENST00000261789 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
TM9SF1-201ENST00000261789 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
TM9SF1-201ENST00000261789 Q6ZSA8 131 aa9.36□□□□□ -0.91
TM9SF1-201ENST00000261789 KRTAP1-4P0C5Y4 121 aa9.33□□□□□ -0.92
TM9SF1-201ENST00000261789 SPINK7P58062 85 aa9.32□□□□□ -0.92
TM9SF1-201ENST00000261789 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
TM9SF1-201ENST00000261789 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
TM9SF1-201ENST00000261789 ACYP2P14621 99 aa9.29□□□□□ -0.92
TM9SF1-201ENST00000261789 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
TM9SF1-201ENST00000261789 SACSQ9NZJ4 4579 aa9.28□□□□□ -0.92
TM9SF1-201ENST00000261789 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
TM9SF1-201ENST00000261789 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
TM9SF1-201ENST00000261789 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
TM9SF1-201ENST00000261789 ATP11AUNQ6ZP68 121 aa9.26□□□□□ -0.93
TM9SF1-201ENST00000261789 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
TM9SF1-201ENST00000261789 IGKV2D-30A0A075B6S6 120 aa9.23□□□□□ -0.93
TM9SF1-201ENST00000261789 KTN1-AS1Q86SY8 53 aa9.22□□□□□ -0.93
TM9SF1-201ENST00000261789 TYMSOSQ8TAI1 123 aa9.21□□□□□ -0.94
TM9SF1-201ENST00000261789 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
TM9SF1-201ENST00000261789 A6NN06 94 aa9.19□□□□□ -0.94
TM9SF1-201ENST00000261789 SPINK1P00995 79 aa9.11□□□□□ -0.95
TM9SF1-201ENST00000261789 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
TM9SF1-201ENST00000261789 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
TM9SF1-201ENST00000261789 FAT1Q14517 4588 aa9.1□□□□□ -0.95
TM9SF1-201ENST00000261789 C7orf65Q6ZTY9 151 aa9.1□□□□□ -0.95
TM9SF1-201ENST00000261789 A0A1B0GU69 56 aa9.09□□□□□ -0.95
TM9SF1-201ENST00000261789 DYNC1H1Q14204 4646 aaKnown RBP9.09□□□□□ -0.95
TM9SF1-201ENST00000261789 LINC00304Q8N9R0 145 aa9.06□□□□□ -0.96
TM9SF1-201ENST00000261789 RYR2Q92736 4967 aa9.04□□□□□ -0.96
TM9SF1-201ENST00000261789 Q8N1X5 172 aa9.04□□□□□ -0.96
TM9SF1-201ENST00000261789 KMT2CQ8NEZ4 4911 aaKnown RBP9.01□□□□□ -0.97
TM9SF1-201ENST00000261789 C9orf92A6NGG3 77 aa9□□□□□ -0.97
TM9SF1-201ENST00000261789 APOBP04114 4563 aaKnown RBP8.95□□□□□ -0.98
TM9SF1-201ENST00000261789 A0A1B0GVY2 172 aa8.93□□□□□ -0.98
TM9SF1-201ENST00000261789 SPATA8Q6RVD6 105 aa8.92□□□□□ -0.98
TM9SF1-201ENST00000261789 MIR22HGQ0VDD5 57 aa8.91□□□□□ -0.98
TM9SF1-201ENST00000261789 UQCR11O14957 56 aa8.9□□□□□ -0.98
TM9SF1-201ENST00000261789 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.98
TM9SF1-201ENST00000261789 RPS29P62273 56 aaKnown RBP8.9□□□□□ -0.99
TM9SF1-201ENST00000261789 PRAC1Q96KF2 57 aa8.87□□□□□ -0.99
TM9SF1-201ENST00000261789 KRTAP10-4P60372 401 aaPredicted RBP8.86□□□□□ -0.99
TM9SF1-201ENST00000261789 ADM2Q7Z4H4 148 aa8.85□□□□□ -0.99
TM9SF1-201ENST00000261789 A8MUU9 505 aa8.82□□□□□ -1
TM9SF1-201ENST00000261789 C20orf166-AS1Q96NR2 134 aa8.82□□□□□ -1
TM9SF1-201ENST00000261789 KRTAP3-1Q9BYR8 98 aa8.81□□□□□ -1
TM9SF1-201ENST00000261789 RYR3Q15413 4870 aa8.79□□□□□ -1
TM9SF1-201ENST00000261789 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
TM9SF1-201ENST00000261789 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
TM9SF1-201ENST00000261789 FAT3Q8TDW7 4589 aa8.69□□□□□ -1.02
TM9SF1-201ENST00000261789 H0YAA0 97 aa8.67□□□□□ -1.02
TM9SF1-201ENST00000261789 TNXBP22105 4242 aa8.66□□□□□ -1.02
TM9SF1-201ENST00000261789 HSPG2P98160 4391 aa8.66□□□□□ -1.02
TM9SF1-201ENST00000261789 MYCBP2O75592 4640 aa8.64□□□□□ -1.03
TM9SF1-201ENST00000261789 A0A1B0GU33 70 aa8.59□□□□□ -1.03
TM9SF1-201ENST00000261789 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
TM9SF1-201ENST00000261789 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
TM9SF1-201ENST00000261789 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
TM9SF1-201ENST00000261789 CSAG1Q6PB30 78 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms