RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 LOC101927531A0A1B0GV80 90 aa9.25□□□□□ -0.93
RFX1-201ENST00000254325 SPANXA2-OT1Q8N9U9 137 aa9.25□□□□□ -0.93
RFX1-201ENST00000254325 CYP4F30PQ9H0H9 118 aa9.24□□□□□ -0.93
RFX1-201ENST00000254325 H3BS24 57 aa9.24□□□□□ -0.93
RFX1-201ENST00000254325 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
RFX1-201ENST00000254325 NOTCH2NLQ7Z3S9 236 aa9.23□□□□□ -0.93
RFX1-201ENST00000254325 MEGF8Q7Z7M0 2845 aa9.22□□□□□ -0.93
RFX1-201ENST00000254325 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
RFX1-201ENST00000254325 IGKV2D-30A0A075B6S6 120 aa9.22□□□□□ -0.93
RFX1-201ENST00000254325 IGKV2-30P06310 120 aa9.22□□□□□ -0.93
RFX1-201ENST00000254325 FAM229AH3BQW9 127 aa9.22□□□□□ -0.93
RFX1-201ENST00000254325 COA5Q86WW8 74 aa9.22□□□□□ -0.93
RFX1-201ENST00000254325 FBN3Q75N90 2809 aa9.21□□□□□ -0.94
RFX1-201ENST00000254325 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.94
RFX1-201ENST00000254325 SPINK1P00995 79 aa9.2□□□□□ -0.94
RFX1-201ENST00000254325 LINC00304Q8N9R0 145 aa9.2□□□□□ -0.94
RFX1-201ENST00000254325 KRTAP21-3Q3LHN1 58 aa9.19□□□□□ -0.94
RFX1-201ENST00000254325 PRR26Q8N8Z3 221 aa9.18□□□□□ -0.94
RFX1-201ENST00000254325 PLECQ15149 4684 aaKnown RBP9.17□□□□□ -0.94
RFX1-201ENST00000254325 KRTAP13-2Q52LG2 175 aa9.15□□□□□ -0.94
RFX1-201ENST00000254325 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.95
RFX1-201ENST00000254325 Q6ZSA8 131 aa9.14□□□□□ -0.95
RFX1-201ENST00000254325 K7ERS5 55 aa9.14□□□□□ -0.95
RFX1-201ENST00000254325 A0A1B0GU69 56 aa9.13□□□□□ -0.95
RFX1-201ENST00000254325 A8MU10 97 aa9.13□□□□□ -0.95
RFX1-201ENST00000254325 ACYP2P14621 99 aa9.11□□□□□ -0.95
RFX1-201ENST00000254325 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
RFX1-201ENST00000254325 KTN1-AS1Q86SY8 53 aa9.1□□□□□ -0.95
RFX1-201ENST00000254325 Q1T7F1 81 aa9.07□□□□□ -0.96
RFX1-201ENST00000254325 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
RFX1-201ENST00000254325 Q8N9P0 234 aaPredicted RBP9.07□□□□□ -0.96
RFX1-201ENST00000254325 Q5W150 140 aa9.06□□□□□ -0.96
RFX1-201ENST00000254325 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
RFX1-201ENST00000254325 C7orf65Q6ZTY9 151 aa9.03□□□□□ -0.96
RFX1-201ENST00000254325 LYSTQ99698 3801 aa9.03□□□□□ -0.96
RFX1-201ENST00000254325 STARD9Q9P2P6 4700 aa9.02□□□□□ -0.96
RFX1-201ENST00000254325 HRES1P13985 223 aa9.01□□□□□ -0.97
RFX1-201ENST00000254325 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
RFX1-201ENST00000254325 KRTAP1-4P0C5Y4 121 aa9□□□□□ -0.97
RFX1-201ENST00000254325 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
RFX1-201ENST00000254325 VPS13DQ5THJ4 4388 aa8.98□□□□□ -0.97
RFX1-201ENST00000254325 PRAC1Q96KF2 57 aa8.94□□□□□ -0.98
RFX1-201ENST00000254325 LCA10Q71F78 164 aa8.94□□□□□ -0.98
RFX1-201ENST00000254325 CDC42SE1Q9NRR8 79 aa8.93□□□□□ -0.98
RFX1-201ENST00000254325 DNHD1Q96M86 4753 aa8.91□□□□□ -0.98
RFX1-201ENST00000254325 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.99
RFX1-201ENST00000254325 UQCR11O14957 56 aa8.89□□□□□ -0.99
RFX1-201ENST00000254325 Q5VV11 94 aa8.89□□□□□ -0.99
RFX1-201ENST00000254325 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
RFX1-201ENST00000254325 DYNC2H1Q8NCM8 4307 aaKnown RBP8.87□□□□□ -0.99
RFX1-201ENST00000254325 Q8N1X5 172 aa8.86□□□□□ -0.99
RFX1-201ENST00000254325 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
RFX1-201ENST00000254325 MIR22HGQ0VDD5 57 aa8.85□□□□□ -0.99
RFX1-201ENST00000254325 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
RFX1-201ENST00000254325 KMT2AQ03164 3969 aa8.82□□□□□ -1
RFX1-201ENST00000254325 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
RFX1-201ENST00000254325 DMAC1Q96GE9 116 aa8.81□□□□□ -1
RFX1-201ENST00000254325 Q75L30 129 aa8.8□□□□□ -1
RFX1-201ENST00000254325 RPS29P62273 56 aaKnown RBP8.8□□□□□ -1
RFX1-201ENST00000254325 Q5VSD8 79 aa8.77□□□□□ -1.01
RFX1-201ENST00000254325 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
RFX1-201ENST00000254325 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
RFX1-201ENST00000254325 SPINK7P58062 85 aa8.74□□□□□ -1.01
RFX1-201ENST00000254325 A0A1B0GVY2 172 aa8.73□□□□□ -1.01
RFX1-201ENST00000254325 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
RFX1-201ENST00000254325 LINC01554Q52M75 96 aa8.69□□□□□ -1.02
RFX1-201ENST00000254325 DNAH2Q9P225 4427 aa8.68□□□□□ -1.02
RFX1-201ENST00000254325 ADM2Q7Z4H4 148 aa8.67□□□□□ -1.02
RFX1-201ENST00000254325 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
RFX1-201ENST00000254325 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
RFX1-201ENST00000254325 ALMS1Q8TCU4 4167 aa8.66□□□□□ -1.02
RFX1-201ENST00000254325 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
RFX1-201ENST00000254325 A8MUU9 505 aa8.57□□□□□ -1.04
RFX1-201ENST00000254325 A6NN06 94 aa8.56□□□□□ -1.04
RFX1-201ENST00000254325 C20orf166-AS1Q96NR2 134 aa8.56□□□□□ -1.04
RFX1-201ENST00000254325 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
RFX1-201ENST00000254325 FRAS1Q86XX4 4008 aa8.54□□□□□ -1.04
RFX1-201ENST00000254325 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
RFX1-201ENST00000254325 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
RFX1-201ENST00000254325 DNAH6Q9C0G6 4158 aa8.52□□□□□ -1.04
RFX1-201ENST00000254325 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
RFX1-201ENST00000254325 HYDINQ4G0P3 5121 aa8.45□□□□□ -1.06
RFX1-201ENST00000254325 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
RFX1-201ENST00000254325 A0A0D9SG42 100 aa8.42□□□□□ -1.06
RFX1-201ENST00000254325 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
RFX1-201ENST00000254325 J3QL48 77 aa8.4□□□□□ -1.06
RFX1-201ENST00000254325 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
RFX1-201ENST00000254325 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
RFX1-201ENST00000254325 A0A1B0GU33 70 aa8.38□□□□□ -1.07
RFX1-201ENST00000254325 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
RFX1-201ENST00000254325 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
RFX1-201ENST00000254325 FAT1Q14517 4588 aa8.33□□□□□ -1.08
RFX1-201ENST00000254325 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
RFX1-201ENST00000254325 XP32Q5T750 250 aa8.31□□□□□ -1.08
RFX1-201ENST00000254325 FAT2Q9NYQ8 4349 aa8.3□□□□□ -1.08
RFX1-201ENST00000254325 S4R3F8 94 aa8.29□□□□□ -1.08
RFX1-201ENST00000254325 SACSQ9NZJ4 4579 aa8.28□□□□□ -1.08
RFX1-201ENST00000254325 PKD1P98161 4303 aa8.26□□□□□ -1.09
RFX1-201ENST00000254325 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
RFX1-201ENST00000254325 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms