RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 NOTCH2NLQ7Z3S9 236 aa10.57□□□□□ -0.72
NDFIP1-201ENST00000253814 Q96NJ1 140 aa10.56□□□□□ -0.72
NDFIP1-201ENST00000253814 C8orf87E5RJ46 101 aa10.55□□□□□ -0.72
NDFIP1-201ENST00000253814 WWC2-AS2Q96NR7 200 aa10.54□□□□□ -0.72
NDFIP1-201ENST00000253814 SSBP3-AS1Q7Z2R9 100 aa10.53□□□□□ -0.72
NDFIP1-201ENST00000253814 TGP01266 2768 aa10.52□□□□□ -0.73
NDFIP1-201ENST00000253814 LINC01558Q9Y6Z2 57 aa10.52□□□□□ -0.73
NDFIP1-201ENST00000253814 LCA10Q71F78 164 aa10.51□□□□□ -0.73
NDFIP1-201ENST00000253814 ANK3Q12955 4377 aaKnown RBP10.5□□□□□ -0.73
NDFIP1-201ENST00000253814 TYMSOSQ8TAI1 123 aa10.5□□□□□ -0.73
NDFIP1-201ENST00000253814 DMBT1Q9UGM3 2413 aaPredicted RBP10.49□□□□□ -0.73
NDFIP1-201ENST00000253814 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
NDFIP1-201ENST00000253814 PLA2G1BP04054 148 aaKnown RBP10.49□□□□□ -0.73
NDFIP1-201ENST00000253814 AKAP9Q99996 3911 aa10.48□□□□□ -0.73
NDFIP1-201ENST00000253814 UQCR11O14957 56 aa10.48□□□□□ -0.73
NDFIP1-201ENST00000253814 MIR22HGQ0VDD5 57 aa10.46□□□□□ -0.73
NDFIP1-201ENST00000253814 Q8N1X5 172 aa10.44□□□□□ -0.74
NDFIP1-201ENST00000253814 Q5W150 140 aa10.43□□□□□ -0.74
NDFIP1-201ENST00000253814 PRAC1Q96KF2 57 aa10.43□□□□□ -0.74
NDFIP1-201ENST00000253814 Q6ZR54 194 aa10.4□□□□□ -0.74
NDFIP1-201ENST00000253814 K7ERS5 55 aa10.4□□□□□ -0.74
NDFIP1-201ENST00000253814 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
NDFIP1-201ENST00000253814 COL7A1Q02388 2944 aa10.38□□□□□ -0.75
NDFIP1-201ENST00000253814 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
NDFIP1-201ENST00000253814 CSMD3Q7Z407 3707 aa10.34□□□□□ -0.75
NDFIP1-201ENST00000253814 LINC00483Q53H64 154 aa10.34□□□□□ -0.75
NDFIP1-201ENST00000253814 SMR3BP02814 79 aaPredicted RBP10.33□□□□□ -0.76
NDFIP1-201ENST00000253814 KRTAP13-1Q8IUC0 172 aa10.33□□□□□ -0.76
NDFIP1-201ENST00000253814 Q6ZRN7 208 aaPredicted RBP10.31□□□□□ -0.76
NDFIP1-201ENST00000253814 FLG2Q5D862 2391 aaPredicted RBP10.28□□□□□ -0.76
NDFIP1-201ENST00000253814 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
NDFIP1-201ENST00000253814 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
NDFIP1-201ENST00000253814 FBN3Q75N90 2809 aa10.21□□□□□ -0.78
NDFIP1-201ENST00000253814 A6NN06 94 aa10.19□□□□□ -0.78
NDFIP1-201ENST00000253814 DMAC1Q96GE9 116 aa10.19□□□□□ -0.78
NDFIP1-201ENST00000253814 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
NDFIP1-201ENST00000253814 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
NDFIP1-201ENST00000253814 CSAG1Q6PB30 78 aa10.07□□□□□ -0.8
NDFIP1-201ENST00000253814 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
NDFIP1-201ENST00000253814 ASB16-AS1Q495Z4 193 aa10.04□□□□□ -0.8
NDFIP1-201ENST00000253814 KRTAP13-2Q52LG2 175 aa10.03□□□□□ -0.8
NDFIP1-201ENST00000253814 MEGF8Q7Z7M0 2845 aa9.99□□□□□ -0.81
NDFIP1-201ENST00000253814 A0A1B0GU33 70 aa9.99□□□□□ -0.81
NDFIP1-201ENST00000253814 CRIPTQ9P021 101 aa9.99□□□□□ -0.81
NDFIP1-201ENST00000253814 A0A0D9SG42 100 aa9.98□□□□□ -0.81
NDFIP1-201ENST00000253814 SPATA8Q6RVD6 105 aa9.94□□□□□ -0.82
NDFIP1-201ENST00000253814 SPINT4Q6UDR6 99 aa9.84□□□□□ -0.83
NDFIP1-201ENST00000253814 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
NDFIP1-201ENST00000253814 H3BS24 57 aa9.74□□□□□ -0.85
NDFIP1-201ENST00000253814 DNAH10Q8IVF4 4471 aa9.71□□□□□ -0.85
NDFIP1-201ENST00000253814 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
NDFIP1-201ENST00000253814 KRTAP1-4P0C5Y4 121 aa9.69□□□□□ -0.86
NDFIP1-201ENST00000253814 HUWE1Q7Z6Z7 4374 aaKnown RBP9.68□□□□□ -0.86
NDFIP1-201ENST00000253814 KRTAP16-1A8MUX0 517 aa9.66□□□□□ -0.86
NDFIP1-201ENST00000253814 Q6ZSA8 131 aa9.6□□□□□ -0.87
NDFIP1-201ENST00000253814 COX6B2Q6YFQ2 88 aa9.57□□□□□ -0.88
NDFIP1-201ENST00000253814 ANK2Q01484 3957 aa9.55□□□□□ -0.88
NDFIP1-201ENST00000253814 RPL37P61927 97 aaKnown RBP9.52□□□□□ -0.89
NDFIP1-201ENST00000253814 H0YAA0 97 aa9.51□□□□□ -0.89
NDFIP1-201ENST00000253814 KRTAP25-1Q3LHN0 102 aa9.5□□□□□ -0.89
NDFIP1-201ENST00000253814 S4R3F8 94 aa9.49□□□□□ -0.89
NDFIP1-201ENST00000253814 ROMO1P60602 79 aa9.46□□□□□ -0.9
NDFIP1-201ENST00000253814 A8MUU9 505 aa9.43□□□□□ -0.9
NDFIP1-201ENST00000253814 PLECQ15149 4684 aaKnown RBP9.41□□□□□ -0.9
NDFIP1-201ENST00000253814 RPS29P62273 56 aaKnown RBP9.4□□□□□ -0.9
NDFIP1-201ENST00000253814 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.91
NDFIP1-201ENST00000253814 LYSTQ99698 3801 aa9.37□□□□□ -0.91
NDFIP1-201ENST00000253814 Q5VSD8 79 aa9.34□□□□□ -0.91
NDFIP1-201ENST00000253814 DNAH9Q9NYC9 4486 aa9.31□□□□□ -0.92
NDFIP1-201ENST00000253814 DNAH1Q9P2D7 4330 aa9.22□□□□□ -0.93
NDFIP1-201ENST00000253814 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
NDFIP1-201ENST00000253814 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
NDFIP1-201ENST00000253814 DNAH11Q96DT5 4516 aa9.19□□□□□ -0.94
NDFIP1-201ENST00000253814 R4GN34 69 aa9.17□□□□□ -0.94
NDFIP1-201ENST00000253814 STARD9Q9P2P6 4700 aa9.14□□□□□ -0.95
NDFIP1-201ENST00000253814 M0QZ58 72 aa9.14□□□□□ -0.95
NDFIP1-201ENST00000253814 J3QL48 77 aa9.1□□□□□ -0.95
NDFIP1-201ENST00000253814 DNAH8Q96JB1 4490 aa9.09□□□□□ -0.95
NDFIP1-201ENST00000253814 P0C880 135 aa9.09□□□□□ -0.95
NDFIP1-201ENST00000253814 FRAS1Q86XX4 4008 aa9.05□□□□□ -0.96
NDFIP1-201ENST00000253814 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
NDFIP1-201ENST00000253814 NDUFAF8A1L188 74 aa9.05□□□□□ -0.96
NDFIP1-201ENST00000253814 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
NDFIP1-201ENST00000253814 CAMK2N1Q7Z7J9 78 aa9.05□□□□□ -0.96
NDFIP1-201ENST00000253814 XP32Q5T750 250 aa9.05□□□□□ -0.96
NDFIP1-201ENST00000253814 CMYA5Q8N3K9 4069 aa8.98□□□□□ -0.97
NDFIP1-201ENST00000253814 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
NDFIP1-201ENST00000253814 PRKDCP78527 4128 aaKnown RBP8.96□□□□□ -0.97
NDFIP1-201ENST00000253814 LRP1BQ9NZR2 4599 aa8.94□□□□□ -0.98
NDFIP1-201ENST00000253814 DNAH17Q9UFH2 4485 aa8.93□□□□□ -0.98
NDFIP1-201ENST00000253814 DNAH3Q8TD57 4116 aa8.9□□□□□ -0.98
NDFIP1-201ENST00000253814 KRTAP10-8P60410 259 aa8.9□□□□□ -0.99
NDFIP1-201ENST00000253814 KRTAP13-4Q3LI77 160 aa8.89□□□□□ -0.99
NDFIP1-201ENST00000253814 LUZP6Q538Z0 58 aa8.87□□□□□ -0.99
NDFIP1-201ENST00000253814 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
NDFIP1-201ENST00000253814 DNAH5Q8TE73 4624 aa8.85□□□□□ -0.99
NDFIP1-201ENST00000253814 DNHD1Q96M86 4753 aa8.84□□□□□ -0.99
NDFIP1-201ENST00000253814 A0A1B0GVY2 172 aa8.83□□□□□ -1
NDFIP1-201ENST00000253814 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
NDFIP1-201ENST00000253814 TPRXLQ17RH7 258 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms