RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 A0A087X002 238 aa9.6□□□□□ -0.87
SLC6A8-201ENST00000253122 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
SLC6A8-201ENST00000253122 NOTCH2NLQ7Z3S9 236 aa9.6□□□□□ -0.87
SLC6A8-201ENST00000253122 A6NN06 94 aa9.59□□□□□ -0.87
SLC6A8-201ENST00000253122 RTL8CO15255 209 aa9.57□□□□□ -0.88
SLC6A8-201ENST00000253122 ZNF861PO60384 105 aa9.57□□□□□ -0.88
SLC6A8-201ENST00000253122 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
SLC6A8-201ENST00000253122 UQCR11O14957 56 aa9.55□□□□□ -0.88
SLC6A8-201ENST00000253122 SPACA4Q8TDM5 124 aa9.55□□□□□ -0.88
SLC6A8-201ENST00000253122 APLNQ9ULZ1 77 aa9.55□□□□□ -0.88
SLC6A8-201ENST00000253122 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
SLC6A8-201ENST00000253122 Q6ZR54 194 aa9.53□□□□□ -0.88
SLC6A8-201ENST00000253122 LY6G6CO95867 125 aa9.52□□□□□ -0.89
SLC6A8-201ENST00000253122 Q5W150 140 aa9.5□□□□□ -0.89
SLC6A8-201ENST00000253122 WWC2-AS2Q96NR7 200 aa9.48□□□□□ -0.89
SLC6A8-201ENST00000253122 A0A087WTM6 91 aa9.47□□□□□ -0.89
SLC6A8-201ENST00000253122 TGP01266 2768 aa9.46□□□□□ -0.89
SLC6A8-201ENST00000253122 Q96NJ1 140 aa9.46□□□□□ -0.89
SLC6A8-201ENST00000253122 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
SLC6A8-201ENST00000253122 C1orf134Q5TEV5 83 aa9.41□□□□□ -0.9
SLC6A8-201ENST00000253122 LINC01554Q52M75 96 aa9.4□□□□□ -0.9
SLC6A8-201ENST00000253122 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
SLC6A8-201ENST00000253122 KRTAP21-3Q3LHN1 58 aa9.4□□□□□ -0.9
SLC6A8-201ENST00000253122 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
SLC6A8-201ENST00000253122 Q8N1X5 172 aa9.39□□□□□ -0.91
SLC6A8-201ENST00000253122 SSBP3-AS1Q7Z2R9 100 aa9.38□□□□□ -0.91
SLC6A8-201ENST00000253122 ANK2Q01484 3957 aa9.35□□□□□ -0.91
SLC6A8-201ENST00000253122 CMYA5Q8N3K9 4069 aa9.35□□□□□ -0.91
SLC6A8-201ENST00000253122 KRTAP13-1Q8IUC0 172 aa9.35□□□□□ -0.91
SLC6A8-201ENST00000253122 LINC00483Q53H64 154 aa9.34□□□□□ -0.92
SLC6A8-201ENST00000253122 K7ERS5 55 aa9.33□□□□□ -0.92
SLC6A8-201ENST00000253122 CSAG1Q6PB30 78 aa9.32□□□□□ -0.92
SLC6A8-201ENST00000253122 DMAC1Q96GE9 116 aa9.32□□□□□ -0.92
SLC6A8-201ENST00000253122 DNAH3Q8TD57 4116 aa9.32□□□□□ -0.92
SLC6A8-201ENST00000253122 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
SLC6A8-201ENST00000253122 H3BS24 57 aa9.29□□□□□ -0.92
SLC6A8-201ENST00000253122 ASB16-AS1Q495Z4 193 aa9.27□□□□□ -0.93
SLC6A8-201ENST00000253122 FBN3Q75N90 2809 aa9.25□□□□□ -0.93
SLC6A8-201ENST00000253122 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
SLC6A8-201ENST00000253122 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
SLC6A8-201ENST00000253122 PLA2G1BP04054 148 aaKnown RBP9.22□□□□□ -0.93
SLC6A8-201ENST00000253122 SPATA8Q6RVD6 105 aa9.22□□□□□ -0.93
SLC6A8-201ENST00000253122 C9orf92A6NGG3 77 aa9.21□□□□□ -0.94
SLC6A8-201ENST00000253122 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
SLC6A8-201ENST00000253122 DNAH9Q9NYC9 4486 aa9.18□□□□□ -0.94
SLC6A8-201ENST00000253122 MEGF8Q7Z7M0 2845 aa9.16□□□□□ -0.94
SLC6A8-201ENST00000253122 A0A0D9SG42 100 aa9.12□□□□□ -0.95
SLC6A8-201ENST00000253122 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
SLC6A8-201ENST00000253122 SPINT4Q6UDR6 99 aa9.07□□□□□ -0.96
SLC6A8-201ENST00000253122 A0A1B0GU33 70 aa9.06□□□□□ -0.96
SLC6A8-201ENST00000253122 DNHD1Q96M86 4753 aa9.04□□□□□ -0.96
SLC6A8-201ENST00000253122 LINC00304Q8N9R0 145 aa9□□□□□ -0.97
SLC6A8-201ENST00000253122 KRTAP10-2P60368 255 aa9□□□□□ -0.97
SLC6A8-201ENST00000253122 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
SLC6A8-201ENST00000253122 PRKDCP78527 4128 aaKnown RBP8.99□□□□□ -0.97
SLC6A8-201ENST00000253122 KRTAP13-2Q52LG2 175 aa8.98□□□□□ -0.97
SLC6A8-201ENST00000253122 PLECQ15149 4684 aaKnown RBP8.92□□□□□ -0.98
SLC6A8-201ENST00000253122 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
SLC6A8-201ENST00000253122 STARD9Q9P2P6 4700 aa8.86□□□□□ -0.99
SLC6A8-201ENST00000253122 DNAH10Q8IVF4 4471 aa8.85□□□□□ -0.99
SLC6A8-201ENST00000253122 DYNC2H1Q8NCM8 4307 aaKnown RBP8.83□□□□□ -1
SLC6A8-201ENST00000253122 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
SLC6A8-201ENST00000253122 KRTAP25-1Q3LHN0 102 aa8.83□□□□□ -1
SLC6A8-201ENST00000253122 Q6ZSA8 131 aa8.82□□□□□ -1
SLC6A8-201ENST00000253122 VPS13DQ5THJ4 4388 aa8.8□□□□□ -1
SLC6A8-201ENST00000253122 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
SLC6A8-201ENST00000253122 LYSTQ99698 3801 aa8.77□□□□□ -1
SLC6A8-201ENST00000253122 H0YAA0 97 aa8.76□□□□□ -1.01
SLC6A8-201ENST00000253122 DNAH1Q9P2D7 4330 aa8.75□□□□□ -1.01
SLC6A8-201ENST00000253122 DNAH7Q8WXX0 4024 aa8.74□□□□□ -1.01
SLC6A8-201ENST00000253122 ROMO1P60602 79 aa8.71□□□□□ -1.02
SLC6A8-201ENST00000253122 A8MUU9 505 aa8.7□□□□□ -1.02
SLC6A8-201ENST00000253122 KRTAP1-4P0C5Y4 121 aa8.67□□□□□ -1.02
SLC6A8-201ENST00000253122 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
SLC6A8-201ENST00000253122 COX6B2Q6YFQ2 88 aa8.63□□□□□ -1.03
SLC6A8-201ENST00000253122 ALMS1Q8TCU4 4167 aa8.63□□□□□ -1.03
SLC6A8-201ENST00000253122 KMT2AQ03164 3969 aa8.61□□□□□ -1.03
SLC6A8-201ENST00000253122 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
SLC6A8-201ENST00000253122 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
SLC6A8-201ENST00000253122 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
SLC6A8-201ENST00000253122 DNAH2Q9P225 4427 aa8.49□□□□□ -1.05
SLC6A8-201ENST00000253122 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
SLC6A8-201ENST00000253122 DNAH6Q9C0G6 4158 aa8.47□□□□□ -1.05
SLC6A8-201ENST00000253122 C20orf166-AS1Q96NR2 134 aa8.46□□□□□ -1.06
SLC6A8-201ENST00000253122 S4R3F8 94 aa8.45□□□□□ -1.06
SLC6A8-201ENST00000253122 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
SLC6A8-201ENST00000253122 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
SLC6A8-201ENST00000253122 RPS29P62273 56 aaKnown RBP8.41□□□□□ -1.06
SLC6A8-201ENST00000253122 DNAH11Q96DT5 4516 aa8.4□□□□□ -1.06
SLC6A8-201ENST00000253122 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
SLC6A8-201ENST00000253122 HYDINQ4G0P3 5121 aa8.35□□□□□ -1.07
SLC6A8-201ENST00000253122 FRAS1Q86XX4 4008 aa8.33□□□□□ -1.08
SLC6A8-201ENST00000253122 DNAH5Q8TE73 4624 aa8.32□□□□□ -1.08
SLC6A8-201ENST00000253122 Q5VSD8 79 aa8.3□□□□□ -1.08
SLC6A8-201ENST00000253122 SACSQ9NZJ4 4579 aa8.3□□□□□ -1.08
SLC6A8-201ENST00000253122 P0C880 135 aa8.24□□□□□ -1.09
SLC6A8-201ENST00000253122 FAT2Q9NYQ8 4349 aa8.24□□□□□ -1.09
SLC6A8-201ENST00000253122 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.1
SLC6A8-201ENST00000253122 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
SLC6A8-201ENST00000253122 DYNC1H1Q14204 4646 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms