RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 LINC00472Q9H8W2 130 aa5.74□□□□□ -1.49
SRSF6-201ENST00000244020 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
SRSF6-201ENST00000244020 LY6G6CO95867 125 aa5.72□□□□□ -1.49
SRSF6-201ENST00000244020 IGLV5-52A0A0A0MRZ9 124 aa5.72□□□□□ -1.49
SRSF6-201ENST00000244020 MMP24-AS1A0A0U1RRL7 71 aa5.72□□□□□ -1.49
SRSF6-201ENST00000244020 HRES1P13985 223 aa5.71□□□□□ -1.5
SRSF6-201ENST00000244020 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
SRSF6-201ENST00000244020 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
SRSF6-201ENST00000244020 FBN1P35555 2871 aaKnown RBP5.7□□□□□ -1.5
SRSF6-201ENST00000244020 KRTAP11-1Q8IUC1 163 aa5.67□□□□□ -1.5
SRSF6-201ENST00000244020 SPRR1BP22528 89 aa5.66□□□□□ -1.5
SRSF6-201ENST00000244020 NUPR2A6NF83 97 aa5.66□□□□□ -1.5
SRSF6-201ENST00000244020 A6NN06 94 aa5.65□□□□□ -1.51
SRSF6-201ENST00000244020 A0A1B0GU33 70 aa5.64□□□□□ -1.51
SRSF6-201ENST00000244020 KRTAP1-5Q9BYS1 174 aa5.62□□□□□ -1.51
SRSF6-201ENST00000244020 KRTAP16-1A8MUX0 517 aa5.62□□□□□ -1.51
SRSF6-201ENST00000244020 Q6ZR54 194 aa5.6□□□□□ -1.51
SRSF6-201ENST00000244020 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
SRSF6-201ENST00000244020 TYMSOSQ8TAI1 123 aa5.58□□□□□ -1.52
SRSF6-201ENST00000244020 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
SRSF6-201ENST00000244020 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
SRSF6-201ENST00000244020 K7EIL1 84 aa5.57□□□□□ -1.52
SRSF6-201ENST00000244020 KRTAP24-1Q3LI83 254 aa5.57□□□□□ -1.52
SRSF6-201ENST00000244020 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
SRSF6-201ENST00000244020 A0A087X002 238 aa5.55□□□□□ -1.52
SRSF6-201ENST00000244020 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
SRSF6-201ENST00000244020 PANO1I0J062 215 aa5.55□□□□□ -1.52
SRSF6-201ENST00000244020 PLAC8Q9NZF1 115 aa5.54□□□□□ -1.52
SRSF6-201ENST00000244020 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
SRSF6-201ENST00000244020 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
SRSF6-201ENST00000244020 CSMD3Q7Z407 3707 aa5.52□□□□□ -1.53
SRSF6-201ENST00000244020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
SRSF6-201ENST00000244020 Q5W150 140 aa5.51□□□□□ -1.53
SRSF6-201ENST00000244020 TENM2Q9NT68 2774 aa5.5□□□□□ -1.53
SRSF6-201ENST00000244020 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
SRSF6-201ENST00000244020 ZNF861PO60384 105 aa5.5□□□□□ -1.53
SRSF6-201ENST00000244020 WWC2-AS2Q96NR7 200 aa5.49□□□□□ -1.53
SRSF6-201ENST00000244020 NBDYA0A0U1RRE5 68 aa5.49□□□□□ -1.53
SRSF6-201ENST00000244020 PSORS1C2Q9UIG4 136 aa5.49□□□□□ -1.53
SRSF6-201ENST00000244020 LINC00483Q53H64 154 aa5.47□□□□□ -1.53
SRSF6-201ENST00000244020 ANK2Q01484 3957 aa5.46□□□□□ -1.54
SRSF6-201ENST00000244020 IGLV7-43P04211 117 aa5.45□□□□□ -1.54
SRSF6-201ENST00000244020 ROMO1P60602 79 aa5.45□□□□□ -1.54
SRSF6-201ENST00000244020 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
SRSF6-201ENST00000244020 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
SRSF6-201ENST00000244020 DNAH10Q8IVF4 4471 aa5.42□□□□□ -1.54
SRSF6-201ENST00000244020 A0A087WTM6 91 aa5.4□□□□□ -1.54
SRSF6-201ENST00000244020 CMYA5Q8N3K9 4069 aa5.39□□□□□ -1.55
SRSF6-201ENST00000244020 RPL37P61927 97 aaKnown RBP5.38□□□□□ -1.55
SRSF6-201ENST00000244020 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
SRSF6-201ENST00000244020 Q6ZRN7 208 aaPredicted RBP5.37□□□□□ -1.55
SRSF6-201ENST00000244020 KRTAP13-3Q3SY46 172 aa5.36□□□□□ -1.55
SRSF6-201ENST00000244020 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
SRSF6-201ENST00000244020 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
SRSF6-201ENST00000244020 LYSTQ99698 3801 aa5.33□□□□□ -1.56
SRSF6-201ENST00000244020 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
SRSF6-201ENST00000244020 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
SRSF6-201ENST00000244020 A8MUU9 505 aa5.32□□□□□ -1.56
SRSF6-201ENST00000244020 TGP01266 2768 aa5.31□□□□□ -1.56
SRSF6-201ENST00000244020 HUWE1Q7Z6Z7 4374 aaKnown RBP5.31□□□□□ -1.56
SRSF6-201ENST00000244020 DNAH9Q9NYC9 4486 aa5.3□□□□□ -1.56
SRSF6-201ENST00000244020 C20orf166-AS1Q96NR2 134 aa5.26□□□□□ -1.57
SRSF6-201ENST00000244020 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
SRSF6-201ENST00000244020 KRTAP13-2Q52LG2 175 aa5.2□□□□□ -1.58
SRSF6-201ENST00000244020 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
SRSF6-201ENST00000244020 R4GN34 69 aa5.19□□□□□ -1.58
SRSF6-201ENST00000244020 FBN3Q75N90 2809 aa5.18□□□□□ -1.58
SRSF6-201ENST00000244020 DNAH3Q8TD57 4116 aa5.18□□□□□ -1.58
SRSF6-201ENST00000244020 MEGF8Q7Z7M0 2845 aa5.17□□□□□ -1.58
SRSF6-201ENST00000244020 DNAH7Q8WXX0 4024 aa5.17□□□□□ -1.58
SRSF6-201ENST00000244020 FRAS1Q86XX4 4008 aa5.17□□□□□ -1.58
SRSF6-201ENST00000244020 ALMS1Q8TCU4 4167 aa5.16□□□□□ -1.58
SRSF6-201ENST00000244020 S4R3F8 94 aa5.16□□□□□ -1.58
SRSF6-201ENST00000244020 DNAH8Q96JB1 4490 aa5.15□□□□□ -1.59
SRSF6-201ENST00000244020 Q6ZSA8 131 aa5.14□□□□□ -1.59
SRSF6-201ENST00000244020 KRTAP10-2P60368 255 aa5.14□□□□□ -1.59
SRSF6-201ENST00000244020 PLECQ15149 4684 aaKnown RBP5.13□□□□□ -1.59
SRSF6-201ENST00000244020 M0QZ58 72 aa5.12□□□□□ -1.59
SRSF6-201ENST00000244020 H0YAA0 97 aa5.12□□□□□ -1.59
SRSF6-201ENST00000244020 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
SRSF6-201ENST00000244020 DNHD1Q96M86 4753 aa5.1□□□□□ -1.59
SRSF6-201ENST00000244020 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
SRSF6-201ENST00000244020 KRTAP1-4P0C5Y4 121 aa5.06□□□□□ -1.6
SRSF6-201ENST00000244020 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
SRSF6-201ENST00000244020 DNAH17Q9UFH2 4485 aa5.04□□□□□ -1.6
SRSF6-201ENST00000244020 HECTD4Q9Y4D8 3996 aa5.03□□□□□ -1.6
SRSF6-201ENST00000244020 KMT2AQ03164 3969 aa5□□□□□ -1.61
SRSF6-201ENST00000244020 STARD9Q9P2P6 4700 aa4.99□□□□□ -1.61
SRSF6-201ENST00000244020 VPS13DQ5THJ4 4388 aa4.98□□□□□ -1.61
SRSF6-201ENST00000244020 DYNC2H1Q8NCM8 4307 aaKnown RBP4.97□□□□□ -1.61
SRSF6-201ENST00000244020 PRKDCP78527 4128 aaKnown RBP4.97□□□□□ -1.61
SRSF6-201ENST00000244020 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
SRSF6-201ENST00000244020 DNAH2Q9P225 4427 aa4.95□□□□□ -1.62
SRSF6-201ENST00000244020 P0C880 135 aa4.94□□□□□ -1.62
SRSF6-201ENST00000244020 J3QL48 77 aa4.93□□□□□ -1.62
SRSF6-201ENST00000244020 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
SRSF6-201ENST00000244020 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
SRSF6-201ENST00000244020 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
SRSF6-201ENST00000244020 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
SRSF6-201ENST00000244020 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms