RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ZNF292O60281 2723 aa7.89□□□□□ -1.15
TARDBP-201ENST00000240185 NBEAQ8NFP9 2946 aa7.88□□□□□ -1.15
TARDBP-201ENST00000240185 C10orf95Q9H7T3 257 aa7.88□□□□□ -1.15
TARDBP-201ENST00000240185 NBEAL2Q6ZNJ1 2754 aa7.87□□□□□ -1.15
TARDBP-201ENST00000240185 SETXQ7Z333 2677 aaKnown RBP7.85□□□□□ -1.15
TARDBP-201ENST00000240185 MAP1AP78559 2803 aaPredicted RBP7.82□□□□□ -1.16
TARDBP-201ENST00000240185 SPENQ96T58 3664 aaKnown RBP7.81□□□□□ -1.16
TARDBP-201ENST00000240185 DMXL2Q8TDJ6 3036 aa7.8□□□□□ -1.16
TARDBP-201ENST00000240185 TNP1P09430 55 aa7.79□□□□□ -1.16
TARDBP-201ENST00000240185 DCHS1Q96JQ0 3298 aa7.78□□□□□ -1.16
TARDBP-201ENST00000240185 ATMQ13315 3056 aa7.78□□□□□ -1.16
TARDBP-201ENST00000240185 ADGRG4Q8IZF6 3080 aa7.74□□□□□ -1.17
TARDBP-201ENST00000240185 SMG1Q96Q15 3661 aaKnown RBP7.74□□□□□ -1.17
TARDBP-201ENST00000240185 NSD1Q96L73 2696 aaPredicted RBP7.74□□□□□ -1.17
TARDBP-201ENST00000240185 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
TARDBP-201ENST00000240185 KRTAP7-1Q8IUC3 87 aa7.69□□□□□ -1.18
TARDBP-201ENST00000240185 RELNP78509 3460 aa7.68□□□□□ -1.18
TARDBP-201ENST00000240185 UBR5O95071 2799 aaPredicted RBP7.68□□□□□ -1.18
TARDBP-201ENST00000240185 IGSF10Q6WRI0 2623 aa7.66□□□□□ -1.18
TARDBP-201ENST00000240185 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.19
TARDBP-201ENST00000240185 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
TARDBP-201ENST00000240185 KALRNO60229 2985 aa7.64□□□□□ -1.19
TARDBP-201ENST00000240185 LRBAP50851 2863 aa7.63□□□□□ -1.19
TARDBP-201ENST00000240185 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
TARDBP-201ENST00000240185 BSNQ9UPA5 3926 aa7.6□□□□□ -1.19
TARDBP-201ENST00000240185 P0C880 135 aa7.6□□□□□ -1.19
TARDBP-201ENST00000240185 TACC2O95359 2948 aa7.57□□□□□ -1.2
TARDBP-201ENST00000240185 Q6ZRN7 208 aaPredicted RBP7.57□□□□□ -1.2
TARDBP-201ENST00000240185 ITPR1Q14643 2758 aa7.55□□□□□ -1.2
TARDBP-201ENST00000240185 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
TARDBP-201ENST00000240185 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.2
TARDBP-201ENST00000240185 ASH1LQ9NR48 2969 aaKnown RBP7.52□□□□□ -1.21
TARDBP-201ENST00000240185 H0YAA0 97 aa7.52□□□□□ -1.21
TARDBP-201ENST00000240185 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
TARDBP-201ENST00000240185 CSMD1Q96PZ7 3565 aa7.48□□□□□ -1.21
TARDBP-201ENST00000240185 SVEP1Q4LDE5 3571 aa7.48□□□□□ -1.21
TARDBP-201ENST00000240185 COL12A1Q99715 3063 aa7.47□□□□□ -1.21
TARDBP-201ENST00000240185 DCHS2Q6V1P9 2916 aa7.44□□□□□ -1.22
TARDBP-201ENST00000240185 APCP25054 2843 aa7.43□□□□□ -1.22
TARDBP-201ENST00000240185 HRNRQ86YZ3 2850 aaPredicted RBP7.42□□□□□ -1.22
TARDBP-201ENST00000240185 UTP20O75691 2785 aaKnown RBP7.42□□□□□ -1.22
TARDBP-201ENST00000240185 HIVEP1P15822 2718 aa7.34□□□□□ -1.23
TARDBP-201ENST00000240185 FLNCQ14315 2725 aa7.32□□□□□ -1.24
TARDBP-201ENST00000240185 ITPR2Q14571 2701 aa7.3□□□□□ -1.24
TARDBP-201ENST00000240185 CRYBG3Q68DQ2 2970 aa7.28□□□□□ -1.24
TARDBP-201ENST00000240185 CELSR1Q9NYQ6 3014 aa7.26□□□□□ -1.25
TARDBP-201ENST00000240185 VPS13CQ709C8 3753 aa7.26□□□□□ -1.25
TARDBP-201ENST00000240185 ZFHX3Q15911 3703 aa7.23□□□□□ -1.25
TARDBP-201ENST00000240185 A0A1B0GVY2 172 aa7.23□□□□□ -1.25
TARDBP-201ENST00000240185 XP32Q5T750 250 aa7.22□□□□□ -1.25
TARDBP-201ENST00000240185 CSMD2Q7Z408 3487 aa7.2□□□□□ -1.26
TARDBP-201ENST00000240185 CELSR2Q9HCU4 2923 aa7.19□□□□□ -1.26
TARDBP-201ENST00000240185 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
TARDBP-201ENST00000240185 ZANQ9Y493 2812 aa7.15□□□□□ -1.26
TARDBP-201ENST00000240185 NIPBLQ6KC79 2804 aaeCLIP7.12□□□□□ -1.27
TARDBP-201ENST00000240185 TENM3Q9P273 2699 aa7.08□□□□□ -1.28
TARDBP-201ENST00000240185 FBN2P35556 2912 aa7.08□□□□□ -1.28
TARDBP-201ENST00000240185 TENM4Q6N022 2769 aa7.08□□□□□ -1.28
TARDBP-201ENST00000240185 PRO2289Q9P1D8 64 aa7.06□□□□□ -1.28
TARDBP-201ENST00000240185 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
TARDBP-201ENST00000240185 CUBNO60494 3623 aa7.01□□□□□ -1.29
TARDBP-201ENST00000240185 MXRA5Q9NR99 2828 aa7□□□□□ -1.29
TARDBP-201ENST00000240185 KRTAP12-2P59991 146 aa7□□□□□ -1.29
TARDBP-201ENST00000240185 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
TARDBP-201ENST00000240185 TGP01266 2768 aa6.97□□□□□ -1.29
TARDBP-201ENST00000240185 NBPF19A0A087WUL8 3843 aa6.96□□□□□ -1.29
TARDBP-201ENST00000240185 NF1P21359 2839 aa6.94□□□□□ -1.3
TARDBP-201ENST00000240185 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
TARDBP-201ENST00000240185 ANK3Q12955 4377 aaKnown RBP6.91□□□□□ -1.3
TARDBP-201ENST00000240185 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
TARDBP-201ENST00000240185 ZNF469Q96JG9 3925 aaPredicted RBP6.9□□□□□ -1.31
TARDBP-201ENST00000240185 TENM1Q9UKZ4 2725 aa6.88□□□□□ -1.31
TARDBP-201ENST00000240185 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
TARDBP-201ENST00000240185 PDZD2O15018 2839 aa6.82□□□□□ -1.32
TARDBP-201ENST00000240185 AKAP9Q99996 3911 aa6.76□□□□□ -1.33
TARDBP-201ENST00000240185 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
TARDBP-201ENST00000240185 INE1O15225 51 aa6.66□□□□□ -1.34
TARDBP-201ENST00000240185 PKD1L1Q8TDX9 2849 aa6.64□□□□□ -1.35
TARDBP-201ENST00000240185 TENM2Q9NT68 2774 aa6.64□□□□□ -1.35
TARDBP-201ENST00000240185 OTOGQ6ZRI0 2925 aa6.62□□□□□ -1.35
TARDBP-201ENST00000240185 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
TARDBP-201ENST00000240185 VWFP04275 2813 aa6.61□□□□□ -1.35
TARDBP-201ENST00000240185 TRRAPQ9Y4A5 3859 aa6.56□□□□□ -1.36
TARDBP-201ENST00000240185 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
TARDBP-201ENST00000240185 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
TARDBP-201ENST00000240185 SRRM2Q9UQ35 2752 aaKnown RBP6.47□□□□□ -1.37
TARDBP-201ENST00000240185 FBN1P35555 2871 aaKnown RBP6.39□□□□□ -1.39
TARDBP-201ENST00000240185 HUWE1Q7Z6Z7 4374 aaKnown RBP6.37□□□□□ -1.39
TARDBP-201ENST00000240185 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
TARDBP-201ENST00000240185 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
TARDBP-201ENST00000240185 ANK2Q01484 3957 aa6.21□□□□□ -1.42
TARDBP-201ENST00000240185 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
TARDBP-201ENST00000240185 FBN3Q75N90 2809 aa6.21□□□□□ -1.42
TARDBP-201ENST00000240185 MEGF8Q7Z7M0 2845 aa6.19□□□□□ -1.42
TARDBP-201ENST00000240185 CMYA5Q8N3K9 4069 aa6.17□□□□□ -1.42
TARDBP-201ENST00000240185 DNAH9Q9NYC9 4486 aa6.15□□□□□ -1.43
TARDBP-201ENST00000240185 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
TARDBP-201ENST00000240185 COL7A1Q02388 2944 aa6.13□□□□□ -1.43
TARDBP-201ENST00000240185 DNAH3Q8TD57 4116 aa6.12□□□□□ -1.43
TARDBP-201ENST00000240185 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms