RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
SLF2-201ENST00000238961 IGSF10Q6WRI0 2623 aa5.99□□□□□ -1.45
SLF2-201ENST00000238961 SVEP1Q4LDE5 3571 aa5.99□□□□□ -1.45
SLF2-201ENST00000238961 NBPF19A0A087WUL8 3843 aa5.98□□□□□ -1.45
SLF2-201ENST00000238961 CHD6Q8TD26 2715 aa5.98□□□□□ -1.45
SLF2-201ENST00000238961 ATRQ13535 2644 aa5.97□□□□□ -1.45
SLF2-201ENST00000238961 BSNQ9UPA5 3926 aa5.97□□□□□ -1.45
SLF2-201ENST00000238961 UTP20O75691 2785 aaKnown RBP5.97□□□□□ -1.45
SLF2-201ENST00000238961 SPRR1AP35321 89 aa5.96□□□□□ -1.46
SLF2-201ENST00000238961 CYSTM1Q9H1C7 97 aa5.92□□□□□ -1.46
SLF2-201ENST00000238961 A0A087X002 238 aa5.88□□□□□ -1.47
SLF2-201ENST00000238961 MAST4O15021 2626 aa5.88□□□□□ -1.47
SLF2-201ENST00000238961 STAB1Q9NY15 2570 aa5.87□□□□□ -1.47
SLF2-201ENST00000238961 TEP1Q99973 2627 aaKnown RBP5.87□□□□□ -1.47
SLF2-201ENST00000238961 STAB2Q8WWQ8 2551 aa5.86□□□□□ -1.47
SLF2-201ENST00000238961 ITPR1Q14643 2758 aa5.86□□□□□ -1.47
SLF2-201ENST00000238961 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
SLF2-201ENST00000238961 ZFHX3Q15911 3703 aa5.86□□□□□ -1.47
SLF2-201ENST00000238961 FLNCQ14315 2725 aa5.85□□□□□ -1.47
SLF2-201ENST00000238961 HRNRQ86YZ3 2850 aaPredicted RBP5.85□□□□□ -1.47
SLF2-201ENST00000238961 A0A1B0GVY2 172 aa5.84□□□□□ -1.47
SLF2-201ENST00000238961 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
SLF2-201ENST00000238961 GCN1Q92616 2671 aaKnown RBP5.82□□□□□ -1.48
SLF2-201ENST00000238961 NBEAL2Q6ZNJ1 2754 aa5.82□□□□□ -1.48
SLF2-201ENST00000238961 BAHCC1Q9P281 2608 aa5.81□□□□□ -1.48
SLF2-201ENST00000238961 ITPR2Q14571 2701 aa5.81□□□□□ -1.48
SLF2-201ENST00000238961 SETXQ7Z333 2677 aaKnown RBP5.8□□□□□ -1.48
SLF2-201ENST00000238961 CELSR1Q9NYQ6 3014 aa5.8□□□□□ -1.48
SLF2-201ENST00000238961 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
SLF2-201ENST00000238961 CELSR2Q9HCU4 2923 aa5.8□□□□□ -1.48
SLF2-201ENST00000238961 VPS13CQ709C8 3753 aa5.79□□□□□ -1.48
SLF2-201ENST00000238961 CUBNO60494 3623 aa5.78□□□□□ -1.48
SLF2-201ENST00000238961 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
SLF2-201ENST00000238961 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.48
SLF2-201ENST00000238961 ZANQ9Y493 2812 aa5.75□□□□□ -1.49
SLF2-201ENST00000238961 CSMD2Q7Z408 3487 aa5.73□□□□□ -1.49
SLF2-201ENST00000238961 A6NN06 94 aa5.73□□□□□ -1.49
SLF2-201ENST00000238961 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
SLF2-201ENST00000238961 RPS29P62273 56 aaKnown RBP5.72□□□□□ -1.49
SLF2-201ENST00000238961 NBEAL1Q6ZS30 2694 aa5.71□□□□□ -1.49
SLF2-201ENST00000238961 FBN2P35556 2912 aa5.71□□□□□ -1.49
SLF2-201ENST00000238961 APCP25054 2843 aa5.71□□□□□ -1.5
SLF2-201ENST00000238961 KRTAP29-1A8MX34 341 aaPredicted RBP5.7□□□□□ -1.5
SLF2-201ENST00000238961 KRTAP11-1Q8IUC1 163 aa5.7□□□□□ -1.5
SLF2-201ENST00000238961 KRTAP4-16G5E9R7 235 aaPredicted RBP5.69□□□□□ -1.5
SLF2-201ENST00000238961 KMT2BQ9UMN6 2715 aaPredicted RBP5.67□□□□□ -1.5
SLF2-201ENST00000238961 UBR5O95071 2799 aaPredicted RBP5.67□□□□□ -1.5
SLF2-201ENST00000238961 COL6A5A8TX70 2615 aa5.66□□□□□ -1.5
SLF2-201ENST00000238961 UNC79Q9P2D8 2635 aa5.65□□□□□ -1.5
SLF2-201ENST00000238961 NOTCH1P46531 2555 aa5.62□□□□□ -1.51
SLF2-201ENST00000238961 NF1P21359 2839 aa5.61□□□□□ -1.51
SLF2-201ENST00000238961 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
SLF2-201ENST00000238961 HIVEP1P15822 2718 aa5.57□□□□□ -1.52
SLF2-201ENST00000238961 KRTAP21-3Q3LHN1 58 aa5.56□□□□□ -1.52
SLF2-201ENST00000238961 KRTAP13-2Q52LG2 175 aa5.55□□□□□ -1.52
SLF2-201ENST00000238961 MXRA5Q9NR99 2828 aa5.53□□□□□ -1.52
SLF2-201ENST00000238961 NSD1Q96L73 2696 aaPredicted RBP5.52□□□□□ -1.53
SLF2-201ENST00000238961 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.53
SLF2-201ENST00000238961 ZNF469Q96JG9 3925 aaPredicted RBP5.48□□□□□ -1.53
SLF2-201ENST00000238961 XP32Q5T750 250 aa5.43□□□□□ -1.54
SLF2-201ENST00000238961 AKAP9Q99996 3911 aa5.42□□□□□ -1.54
SLF2-201ENST00000238961 TRRAPQ9Y4A5 3859 aa5.4□□□□□ -1.54
SLF2-201ENST00000238961 TENM4Q6N022 2769 aa5.38□□□□□ -1.55
SLF2-201ENST00000238961 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
SLF2-201ENST00000238961 H0YAA0 97 aa5.34□□□□□ -1.55
SLF2-201ENST00000238961 PDZD2O15018 2839 aa5.32□□□□□ -1.56
SLF2-201ENST00000238961 ANK3Q12955 4377 aaKnown RBP5.31□□□□□ -1.56
SLF2-201ENST00000238961 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
SLF2-201ENST00000238961 KRTAP13-1Q8IUC0 172 aa5.29□□□□□ -1.56
SLF2-201ENST00000238961 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SLF2-201ENST00000238961 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
SLF2-201ENST00000238961 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
SLF2-201ENST00000238961 FBN1P35555 2871 aaKnown RBP5.19□□□□□ -1.58
SLF2-201ENST00000238961 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
SLF2-201ENST00000238961 OTOGQ6ZRI0 2925 aa5.18□□□□□ -1.58
SLF2-201ENST00000238961 CSMD3Q7Z407 3707 aa5.14□□□□□ -1.59
SLF2-201ENST00000238961 VWFP04275 2813 aa5.14□□□□□ -1.59
SLF2-201ENST00000238961 TENM3Q9P273 2699 aa5.13□□□□□ -1.59
SLF2-201ENST00000238961 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
SLF2-201ENST00000238961 KRTAP13-3Q3SY46 172 aa5.1□□□□□ -1.59
SLF2-201ENST00000238961 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
SLF2-201ENST00000238961 PKD1L1Q8TDX9 2849 aa5.09□□□□□ -1.59
SLF2-201ENST00000238961 TENM2Q9NT68 2774 aa5□□□□□ -1.61
SLF2-201ENST00000238961 TGP01266 2768 aa4.98□□□□□ -1.61
SLF2-201ENST00000238961 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.61
SLF2-201ENST00000238961 INE1O15225 51 aa4.95□□□□□ -1.62
SLF2-201ENST00000238961 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
SLF2-201ENST00000238961 KRTAP12-1P59990 96 aa4.9□□□□□ -1.62
SLF2-201ENST00000238961 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
SLF2-201ENST00000238961 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
SLF2-201ENST00000238961 ANK2Q01484 3957 aa4.87□□□□□ -1.63
SLF2-201ENST00000238961 LYSTQ99698 3801 aa4.8□□□□□ -1.64
SLF2-201ENST00000238961 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
SLF2-201ENST00000238961 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
SLF2-201ENST00000238961 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
SLF2-201ENST00000238961 KMT2AQ03164 3969 aa4.72□□□□□ -1.65
SLF2-201ENST00000238961 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.65
SLF2-201ENST00000238961 DNAH9Q9NYC9 4486 aa4.7□□□□□ -1.66
SLF2-201ENST00000238961 SRRM2Q9UQ35 2752 aaKnown RBP4.69□□□□□ -1.66
SLF2-201ENST00000238961 DNAH10Q8IVF4 4471 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms