RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 DSPP15924 2871 aaKnown RBP6.09□□□□□ -1.43
LAMA4-201ENST00000230538 KALRNO60229 2985 aa6.09□□□□□ -1.43
LAMA4-201ENST00000230538 SPTBN5Q9NRC6 3674 aaKnown RBP6.09□□□□□ -1.43
LAMA4-201ENST00000230538 LAMA1P25391 3075 aa6.09□□□□□ -1.44
LAMA4-201ENST00000230538 H0YAA0 97 aa6.08□□□□□ -1.44
LAMA4-201ENST00000230538 UBR5O95071 2799 aaPredicted RBP6.08□□□□□ -1.44
LAMA4-201ENST00000230538 LRBAP50851 2863 aa6.07□□□□□ -1.44
LAMA4-201ENST00000230538 MAP1AP78559 2803 aaPredicted RBP6.03□□□□□ -1.44
LAMA4-201ENST00000230538 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
LAMA4-201ENST00000230538 APCP25054 2843 aa6.01□□□□□ -1.45
LAMA4-201ENST00000230538 P0C880 135 aa6□□□□□ -1.45
LAMA4-201ENST00000230538 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
LAMA4-201ENST00000230538 ITPR1Q14643 2758 aa5.98□□□□□ -1.45
LAMA4-201ENST00000230538 USP34Q70CQ2 3546 aa5.96□□□□□ -1.46
LAMA4-201ENST00000230538 REV3LO60673 3130 aa5.96□□□□□ -1.46
LAMA4-201ENST00000230538 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
LAMA4-201ENST00000230538 UTP20O75691 2785 aaKnown RBP5.94□□□□□ -1.46
LAMA4-201ENST00000230538 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
LAMA4-201ENST00000230538 CFAP47Q6ZTR5 3102 aa5.92□□□□□ -1.46
LAMA4-201ENST00000230538 BOD1L1Q8NFC6 3051 aa5.91□□□□□ -1.46
LAMA4-201ENST00000230538 ZZEF1O43149 2961 aa5.9□□□□□ -1.46
LAMA4-201ENST00000230538 DMXL2Q8TDJ6 3036 aa5.9□□□□□ -1.47
LAMA4-201ENST00000230538 HIVEP1P15822 2718 aa5.89□□□□□ -1.47
LAMA4-201ENST00000230538 ATMQ13315 3056 aa5.88□□□□□ -1.47
LAMA4-201ENST00000230538 FRYLO94915 3013 aa5.88□□□□□ -1.47
LAMA4-201ENST00000230538 CRYBG3Q68DQ2 2970 aa5.86□□□□□ -1.47
LAMA4-201ENST00000230538 ADGRG4Q8IZF6 3080 aa5.86□□□□□ -1.47
LAMA4-201ENST00000230538 TACC2O95359 2948 aa5.86□□□□□ -1.47
LAMA4-201ENST00000230538 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
LAMA4-201ENST00000230538 NBEAQ8NFP9 2946 aa5.84□□□□□ -1.48
LAMA4-201ENST00000230538 SPEGQ15772 3267 aa5.82□□□□□ -1.48
LAMA4-201ENST00000230538 COL12A1Q99715 3063 aa5.81□□□□□ -1.48
LAMA4-201ENST00000230538 EYSQ5T1H1 3165 aa5.79□□□□□ -1.48
LAMA4-201ENST00000230538 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
LAMA4-201ENST00000230538 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
LAMA4-201ENST00000230538 FLNCQ14315 2725 aa5.74□□□□□ -1.49
LAMA4-201ENST00000230538 TENM4Q6N022 2769 aa5.72□□□□□ -1.49
LAMA4-201ENST00000230538 TNRC18O15417 2968 aaPredicted RBP5.71□□□□□ -1.5
LAMA4-201ENST00000230538 CELSR2Q9HCU4 2923 aa5.69□□□□□ -1.5
LAMA4-201ENST00000230538 ASPMQ8IZT6 3477 aa5.69□□□□□ -1.5
LAMA4-201ENST00000230538 NIPBLQ6KC79 2804 aaeCLIP5.69□□□□□ -1.5
LAMA4-201ENST00000230538 HRNRQ86YZ3 2850 aaPredicted RBP5.68□□□□□ -1.5
LAMA4-201ENST00000230538 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.51
LAMA4-201ENST00000230538 DCHS1Q96JQ0 3298 aa5.64□□□□□ -1.51
LAMA4-201ENST00000230538 DCHS2Q6V1P9 2916 aa5.63□□□□□ -1.51
LAMA4-201ENST00000230538 DMXL1Q9Y485 3027 aa5.61□□□□□ -1.51
LAMA4-201ENST00000230538 WDFY3Q8IZQ1 3526 aa5.6□□□□□ -1.51
LAMA4-201ENST00000230538 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
LAMA4-201ENST00000230538 LOC400499M0QZD8 3231 aa5.59□□□□□ -1.51
LAMA4-201ENST00000230538 TGP01266 2768 aa5.55□□□□□ -1.52
LAMA4-201ENST00000230538 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
LAMA4-201ENST00000230538 ZFHX4Q86UP3 3567 aa5.54□□□□□ -1.52
LAMA4-201ENST00000230538 TENM1Q9UKZ4 2725 aa5.53□□□□□ -1.52
LAMA4-201ENST00000230538 CSMD1Q96PZ7 3565 aa5.53□□□□□ -1.52
LAMA4-201ENST00000230538 TENM2Q9NT68 2774 aa5.52□□□□□ -1.53
LAMA4-201ENST00000230538 ZANQ9Y493 2812 aa5.5□□□□□ -1.53
LAMA4-201ENST00000230538 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
LAMA4-201ENST00000230538 NBPF19A0A087WUL8 3843 aa5.48□□□□□ -1.53
LAMA4-201ENST00000230538 RELNP78509 3460 aa5.47□□□□□ -1.53
LAMA4-201ENST00000230538 CELSR1Q9NYQ6 3014 aa5.47□□□□□ -1.53
LAMA4-201ENST00000230538 NF1P21359 2839 aa5.46□□□□□ -1.53
LAMA4-201ENST00000230538 FBN2P35556 2912 aa5.45□□□□□ -1.54
LAMA4-201ENST00000230538 TENM3Q9P273 2699 aa5.41□□□□□ -1.54
LAMA4-201ENST00000230538 LAMA5O15230 3695 aa5.4□□□□□ -1.54
LAMA4-201ENST00000230538 ANK3Q12955 4377 aaKnown RBP5.4□□□□□ -1.55
LAMA4-201ENST00000230538 SMG1Q96Q15 3661 aaKnown RBP5.38□□□□□ -1.55
LAMA4-201ENST00000230538 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
LAMA4-201ENST00000230538 DMDP11532 3685 aa5.31□□□□□ -1.56
LAMA4-201ENST00000230538 MXRA5Q9NR99 2828 aa5.28□□□□□ -1.56
LAMA4-201ENST00000230538 PKD1L1Q8TDX9 2849 aa5.22□□□□□ -1.57
LAMA4-201ENST00000230538 PDZD2O15018 2839 aa5.22□□□□□ -1.57
LAMA4-201ENST00000230538 SVEP1Q4LDE5 3571 aa5.21□□□□□ -1.57
LAMA4-201ENST00000230538 VWFP04275 2813 aa5.2□□□□□ -1.58
LAMA4-201ENST00000230538 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
LAMA4-201ENST00000230538 HUWE1Q7Z6Z7 4374 aaKnown RBP5.19□□□□□ -1.58
LAMA4-201ENST00000230538 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
LAMA4-201ENST00000230538 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
LAMA4-201ENST00000230538 INE1O15225 51 aa5.18□□□□□ -1.58
LAMA4-201ENST00000230538 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
LAMA4-201ENST00000230538 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
LAMA4-201ENST00000230538 SPENQ96T58 3664 aaKnown RBP5.17□□□□□ -1.58
LAMA4-201ENST00000230538 BSNQ9UPA5 3926 aa5.13□□□□□ -1.59
LAMA4-201ENST00000230538 ALMS1Q8TCU4 4167 aa5.11□□□□□ -1.59
LAMA4-201ENST00000230538 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
LAMA4-201ENST00000230538 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
LAMA4-201ENST00000230538 AKAP9Q99996 3911 aa5.03□□□□□ -1.6
LAMA4-201ENST00000230538 CSMD2Q7Z408 3487 aa5.02□□□□□ -1.61
LAMA4-201ENST00000230538 TRRAPQ9Y4A5 3859 aa5.02□□□□□ -1.61
LAMA4-201ENST00000230538 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
LAMA4-201ENST00000230538 VPS13CQ709C8 3753 aa5.01□□□□□ -1.61
LAMA4-201ENST00000230538 MUC3AQ02505 3323 aa4.99□□□□□ -1.61
LAMA4-201ENST00000230538 FBN1P35555 2871 aaKnown RBP4.99□□□□□ -1.61
LAMA4-201ENST00000230538 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
LAMA4-201ENST00000230538 ZFHX3Q15911 3703 aa4.98□□□□□ -1.61
LAMA4-201ENST00000230538 MEGF8Q7Z7M0 2845 aa4.97□□□□□ -1.61
LAMA4-201ENST00000230538 FBN3Q75N90 2809 aa4.97□□□□□ -1.61
LAMA4-201ENST00000230538 OTOGQ6ZRI0 2925 aa4.96□□□□□ -1.62
LAMA4-201ENST00000230538 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
LAMA4-201ENST00000230538 LORP23490 312 aaPredicted RBP4.93□□□□□ -1.62
LAMA4-201ENST00000230538 CUBNO60494 3623 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms