RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 Q5W150 140 aa6.91□□□□□ -1.3
NOD1-201ENST00000222823 OXTP01178 125 aa6.91□□□□□ -1.3
NOD1-201ENST00000222823 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
NOD1-201ENST00000222823 KRTAP10-1P60331 282 aa6.89□□□□□ -1.31
NOD1-201ENST00000222823 Q75L30 129 aa6.89□□□□□ -1.31
NOD1-201ENST00000222823 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
NOD1-201ENST00000222823 FP248Q71RG6 208 aaPredicted RBP6.89□□□□□ -1.31
NOD1-201ENST00000222823 PANO1I0J062 215 aa6.88□□□□□ -1.31
NOD1-201ENST00000222823 SPINK7P58062 85 aa6.88□□□□□ -1.31
NOD1-201ENST00000222823 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
NOD1-201ENST00000222823 PDZD2O15018 2839 aa6.85□□□□□ -1.31
NOD1-201ENST00000222823 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
NOD1-201ENST00000222823 LCE6AA0A183 80 aa6.84□□□□□ -1.32
NOD1-201ENST00000222823 LINC00483Q53H64 154 aa6.83□□□□□ -1.32
NOD1-201ENST00000222823 Q6ZR54 194 aa6.82□□□□□ -1.32
NOD1-201ENST00000222823 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
NOD1-201ENST00000222823 CSMD2Q7Z408 3487 aa6.81□□□□□ -1.32
NOD1-201ENST00000222823 Q5VSD8 79 aa6.79□□□□□ -1.32
NOD1-201ENST00000222823 Q5VV11 94 aa6.79□□□□□ -1.32
NOD1-201ENST00000222823 M0R2T5 61 aa6.78□□□□□ -1.32
NOD1-201ENST00000222823 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
NOD1-201ENST00000222823 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
NOD1-201ENST00000222823 S4R3F8 94 aa6.77□□□□□ -1.33
NOD1-201ENST00000222823 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
NOD1-201ENST00000222823 A0A087X002 238 aa6.75□□□□□ -1.33
NOD1-201ENST00000222823 TENM1Q9UKZ4 2725 aa6.75□□□□□ -1.33
NOD1-201ENST00000222823 KRTAP11-1Q8IUC1 163 aa6.74□□□□□ -1.33
NOD1-201ENST00000222823 VWFP04275 2813 aa6.73□□□□□ -1.33
NOD1-201ENST00000222823 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
NOD1-201ENST00000222823 LUZP6Q538Z0 58 aa6.71□□□□□ -1.34
NOD1-201ENST00000222823 R4GN34 69 aa6.71□□□□□ -1.34
NOD1-201ENST00000222823 Q6ZRN7 208 aaPredicted RBP6.7□□□□□ -1.34
NOD1-201ENST00000222823 VPS13CQ709C8 3753 aa6.7□□□□□ -1.34
NOD1-201ENST00000222823 PRAC1Q96KF2 57 aa6.69□□□□□ -1.34
NOD1-201ENST00000222823 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
NOD1-201ENST00000222823 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
NOD1-201ENST00000222823 ZFHX3Q15911 3703 aa6.66□□□□□ -1.34
NOD1-201ENST00000222823 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
NOD1-201ENST00000222823 NBPF19A0A087WUL8 3843 aa6.63□□□□□ -1.35
NOD1-201ENST00000222823 RPL37P61927 97 aaKnown RBP6.63□□□□□ -1.35
NOD1-201ENST00000222823 ANK3Q12955 4377 aaKnown RBP6.62□□□□□ -1.35
NOD1-201ENST00000222823 ASB16-AS1Q495Z4 193 aa6.61□□□□□ -1.35
NOD1-201ENST00000222823 H1FX-AS1Q4G0G2 97 aa6.58□□□□□ -1.36
NOD1-201ENST00000222823 M0QZ58 72 aa6.56□□□□□ -1.36
NOD1-201ENST00000222823 FBN1P35555 2871 aaKnown RBP6.55□□□□□ -1.36
NOD1-201ENST00000222823 RPS29P62273 56 aaKnown RBP6.54□□□□□ -1.36
NOD1-201ENST00000222823 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
NOD1-201ENST00000222823 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
NOD1-201ENST00000222823 ROMO1P60602 79 aa6.52□□□□□ -1.37
NOD1-201ENST00000222823 ADM2Q7Z4H4 148 aa6.49□□□□□ -1.37
NOD1-201ENST00000222823 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
NOD1-201ENST00000222823 TENM2Q9NT68 2774 aa6.42□□□□□ -1.38
NOD1-201ENST00000222823 TRRAPQ9Y4A5 3859 aa6.42□□□□□ -1.38
NOD1-201ENST00000222823 ZNF469Q96JG9 3925 aaPredicted RBP6.41□□□□□ -1.38
NOD1-201ENST00000222823 AKAP9Q99996 3911 aa6.36□□□□□ -1.39
NOD1-201ENST00000222823 A8MU10 97 aa6.36□□□□□ -1.39
NOD1-201ENST00000222823 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
NOD1-201ENST00000222823 A8MUU9 505 aa6.34□□□□□ -1.4
NOD1-201ENST00000222823 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
NOD1-201ENST00000222823 H3BS24 57 aa6.3□□□□□ -1.4
NOD1-201ENST00000222823 A6NN06 94 aa6.3□□□□□ -1.4
NOD1-201ENST00000222823 TGP01266 2768 aa6.3□□□□□ -1.4
NOD1-201ENST00000222823 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
NOD1-201ENST00000222823 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
NOD1-201ENST00000222823 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
NOD1-201ENST00000222823 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
NOD1-201ENST00000222823 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
NOD1-201ENST00000222823 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
NOD1-201ENST00000222823 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
NOD1-201ENST00000222823 XP32Q5T750 250 aa6.14□□□□□ -1.43
NOD1-201ENST00000222823 HUWE1Q7Z6Z7 4374 aaKnown RBP6.1□□□□□ -1.43
NOD1-201ENST00000222823 CSMD3Q7Z407 3707 aa6.09□□□□□ -1.44
NOD1-201ENST00000222823 TNP1P09430 55 aa6.07□□□□□ -1.44
NOD1-201ENST00000222823 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
NOD1-201ENST00000222823 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
NOD1-201ENST00000222823 COL7A1Q02388 2944 aa6.02□□□□□ -1.45
NOD1-201ENST00000222823 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
NOD1-201ENST00000222823 H0YAA0 97 aa5.97□□□□□ -1.45
NOD1-201ENST00000222823 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
NOD1-201ENST00000222823 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
NOD1-201ENST00000222823 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
NOD1-201ENST00000222823 DNAH9Q9NYC9 4486 aa5.91□□□□□ -1.46
NOD1-201ENST00000222823 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
NOD1-201ENST00000222823 P0C880 135 aa5.89□□□□□ -1.47
NOD1-201ENST00000222823 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
NOD1-201ENST00000222823 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
NOD1-201ENST00000222823 DNAH10Q8IVF4 4471 aa5.8□□□□□ -1.48
NOD1-201ENST00000222823 DNAH1Q9P2D7 4330 aa5.76□□□□□ -1.49
NOD1-201ENST00000222823 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
NOD1-201ENST00000222823 DNAH3Q8TD57 4116 aa5.73□□□□□ -1.49
NOD1-201ENST00000222823 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
NOD1-201ENST00000222823 DNHD1Q96M86 4753 aa5.69□□□□□ -1.5
NOD1-201ENST00000222823 ANK2Q01484 3957 aa5.69□□□□□ -1.5
NOD1-201ENST00000222823 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
NOD1-201ENST00000222823 DNAH17Q9UFH2 4485 aa5.68□□□□□ -1.5
NOD1-201ENST00000222823 CMYA5Q8N3K9 4069 aa5.65□□□□□ -1.5
NOD1-201ENST00000222823 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
NOD1-201ENST00000222823 STARD9Q9P2P6 4700 aa5.63□□□□□ -1.51
NOD1-201ENST00000222823 ALMS1Q8TCU4 4167 aa5.61□□□□□ -1.51
NOD1-201ENST00000222823 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms