RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 PANO1I0J062 215 aa5.82□□□□□ -1.48
TUBB1-201ENST00000217133 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
TUBB1-201ENST00000217133 ZNF706Q9Y5V0 76 aaPredicted RBP5.81□□□□□ -1.48
TUBB1-201ENST00000217133 A0A087X002 238 aa5.8□□□□□ -1.48
TUBB1-201ENST00000217133 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
TUBB1-201ENST00000217133 ANAPC11Q9NYG5 84 aa5.8□□□□□ -1.48
TUBB1-201ENST00000217133 ACYP2P14621 99 aa5.78□□□□□ -1.48
TUBB1-201ENST00000217133 APLNQ9ULZ1 77 aa5.78□□□□□ -1.48
TUBB1-201ENST00000217133 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.77□□□□□ -1.49
TUBB1-201ENST00000217133 DNAH10Q8IVF4 4471 aa5.77□□□□□ -1.49
TUBB1-201ENST00000217133 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
TUBB1-201ENST00000217133 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
TUBB1-201ENST00000217133 KMT2AQ03164 3969 aa5.76□□□□□ -1.49
TUBB1-201ENST00000217133 Q5W150 140 aa5.76□□□□□ -1.49
TUBB1-201ENST00000217133 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
TUBB1-201ENST00000217133 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
TUBB1-201ENST00000217133 NUPR2A6NF83 97 aa5.74□□□□□ -1.49
TUBB1-201ENST00000217133 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
TUBB1-201ENST00000217133 PSORS1C2Q9UIG4 136 aa5.73□□□□□ -1.49
TUBB1-201ENST00000217133 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
TUBB1-201ENST00000217133 A0A1B0GU69 56 aa5.73□□□□□ -1.49
TUBB1-201ENST00000217133 LY6G6CO95867 125 aa5.73□□□□□ -1.49
TUBB1-201ENST00000217133 LINC00313P59037 77 aa5.72□□□□□ -1.49
TUBB1-201ENST00000217133 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
TUBB1-201ENST00000217133 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
TUBB1-201ENST00000217133 ZNF861PO60384 105 aa5.71□□□□□ -1.49
TUBB1-201ENST00000217133 HYDINQ4G0P3 5121 aa5.71□□□□□ -1.5
TUBB1-201ENST00000217133 IGLV5-52A0A0A0MRZ9 124 aa5.7□□□□□ -1.5
TUBB1-201ENST00000217133 KMT2CQ8NEZ4 4911 aaKnown RBP5.68□□□□□ -1.5
TUBB1-201ENST00000217133 VPS13DQ5THJ4 4388 aa5.68□□□□□ -1.5
TUBB1-201ENST00000217133 Q6ZRN7 208 aaPredicted RBP5.68□□□□□ -1.5
TUBB1-201ENST00000217133 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
TUBB1-201ENST00000217133 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
TUBB1-201ENST00000217133 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
TUBB1-201ENST00000217133 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
TUBB1-201ENST00000217133 A0A087WTM6 91 aa5.66□□□□□ -1.5
TUBB1-201ENST00000217133 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
TUBB1-201ENST00000217133 RTL8CO15255 209 aa5.66□□□□□ -1.5
TUBB1-201ENST00000217133 ADM2Q7Z4H4 148 aa5.66□□□□□ -1.5
TUBB1-201ENST00000217133 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
TUBB1-201ENST00000217133 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
TUBB1-201ENST00000217133 UQCR11O14957 56 aa5.64□□□□□ -1.51
TUBB1-201ENST00000217133 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
TUBB1-201ENST00000217133 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
TUBB1-201ENST00000217133 IGKV2D-30A0A075B6S6 120 aa5.61□□□□□ -1.51
TUBB1-201ENST00000217133 IGLV7-43P04211 117 aa5.61□□□□□ -1.51
TUBB1-201ENST00000217133 IGKV2-30P06310 120 aa5.61□□□□□ -1.51
TUBB1-201ENST00000217133 SSBP3-AS1Q7Z2R9 100 aa5.61□□□□□ -1.51
TUBB1-201ENST00000217133 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
TUBB1-201ENST00000217133 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
TUBB1-201ENST00000217133 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.51
TUBB1-201ENST00000217133 SPINK1P00995 79 aa5.55□□□□□ -1.52
TUBB1-201ENST00000217133 C1orf134Q5TEV5 83 aa5.55□□□□□ -1.52
TUBB1-201ENST00000217133 RYR3Q15413 4870 aa5.54□□□□□ -1.52
TUBB1-201ENST00000217133 C4orf48Q5BLP8 95 aa5.53□□□□□ -1.52
TUBB1-201ENST00000217133 CSAG1Q6PB30 78 aa5.52□□□□□ -1.53
TUBB1-201ENST00000217133 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
TUBB1-201ENST00000217133 RYR2Q92736 4967 aa5.51□□□□□ -1.53
TUBB1-201ENST00000217133 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
TUBB1-201ENST00000217133 PKHD1P08F94 4074 aa5.49□□□□□ -1.53
TUBB1-201ENST00000217133 DNAH17Q9UFH2 4485 aa5.49□□□□□ -1.53
TUBB1-201ENST00000217133 DNAH11Q96DT5 4516 aa5.48□□□□□ -1.53
TUBB1-201ENST00000217133 FAT2Q9NYQ8 4349 aa5.48□□□□□ -1.53
TUBB1-201ENST00000217133 DNAH8Q96JB1 4490 aa5.48□□□□□ -1.53
TUBB1-201ENST00000217133 ALMS1Q8TCU4 4167 aa5.47□□□□□ -1.53
TUBB1-201ENST00000217133 Q8N1X5 172 aa5.47□□□□□ -1.53
TUBB1-201ENST00000217133 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
TUBB1-201ENST00000217133 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
TUBB1-201ENST00000217133 HECTD4Q9Y4D8 3996 aa5.44□□□□□ -1.54
TUBB1-201ENST00000217133 DNAH5Q8TE73 4624 aa5.43□□□□□ -1.54
TUBB1-201ENST00000217133 H3BS24 57 aa5.42□□□□□ -1.54
TUBB1-201ENST00000217133 PKD1P98161 4303 aa5.41□□□□□ -1.54
TUBB1-201ENST00000217133 KRTAP10-1P60331 282 aa5.39□□□□□ -1.55
TUBB1-201ENST00000217133 TYMSOSQ8TAI1 123 aa5.38□□□□□ -1.55
TUBB1-201ENST00000217133 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
TUBB1-201ENST00000217133 EPPK1P58107 5090 aaKnown RBP5.37□□□□□ -1.55
TUBB1-201ENST00000217133 DYNC1H1Q14204 4646 aaKnown RBP5.36□□□□□ -1.55
TUBB1-201ENST00000217133 Q6ZSA8 131 aa5.35□□□□□ -1.55
TUBB1-201ENST00000217133 A0A1B0GU33 70 aa5.34□□□□□ -1.55
TUBB1-201ENST00000217133 FAT1Q14517 4588 aa5.34□□□□□ -1.55
TUBB1-201ENST00000217133 H0YAA0 97 aa5.34□□□□□ -1.55
TUBB1-201ENST00000217133 KRTAP1-4P0C5Y4 121 aa5.33□□□□□ -1.56
TUBB1-201ENST00000217133 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
TUBB1-201ENST00000217133 A8MUU9 505 aa5.32□□□□□ -1.56
TUBB1-201ENST00000217133 KIAA1109Q2LD37 5005 aa5.32□□□□□ -1.56
TUBB1-201ENST00000217133 FLG2Q5D862 2391 aaPredicted RBP5.31□□□□□ -1.56
TUBB1-201ENST00000217133 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
TUBB1-201ENST00000217133 LINC00304Q8N9R0 145 aa5.31□□□□□ -1.56
TUBB1-201ENST00000217133 A0A1B0GVY2 172 aa5.31□□□□□ -1.56
TUBB1-201ENST00000217133 K7ERS5 55 aa5.31□□□□□ -1.56
TUBB1-201ENST00000217133 C9orf92A6NGG3 77 aa5.28□□□□□ -1.56
TUBB1-201ENST00000217133 H1FX-AS1Q4G0G2 97 aa5.28□□□□□ -1.56
TUBB1-201ENST00000217133 CRIPTQ9P021 101 aa5.26□□□□□ -1.57
TUBB1-201ENST00000217133 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
TUBB1-201ENST00000217133 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
TUBB1-201ENST00000217133 ROMO1P60602 79 aa5.23□□□□□ -1.57
TUBB1-201ENST00000217133 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
TUBB1-201ENST00000217133 KRTAP17-1Q9BYP8 105 aa5.19□□□□□ -1.58
TUBB1-201ENST00000217133 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
TUBB1-201ENST00000217133 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms