RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 TMEM258P61165 79 aa10.68□□□□□ -0.7
CTSA-201ENST00000191018 LIMD2Q9BT23 127 aa10.68□□□□□ -0.7
CTSA-201ENST00000191018 C5orf47Q569G3 176 aa10.67□□□□□ -0.7
CTSA-201ENST00000191018 C1orf195Q5TG92 126 aa10.67□□□□□ -0.7
CTSA-201ENST00000191018 SPINK1P00995 79 aa10.66□□□□□ -0.7
CTSA-201ENST00000191018 C4orf48Q5BLP8 95 aa10.65□□□□□ -0.7
CTSA-201ENST00000191018 NOTCH2NLQ7Z3S9 236 aa10.65□□□□□ -0.7
CTSA-201ENST00000191018 NDUFC1O43677 76 aa10.63□□□□□ -0.71
CTSA-201ENST00000191018 LINC00304Q8N9R0 145 aa10.61□□□□□ -0.71
CTSA-201ENST00000191018 RPS29P62273 56 aaKnown RBP10.6□□□□□ -0.71
CTSA-201ENST00000191018 ZCCHC13Q8WW36 166 aaKnown RBP10.6□□□□□ -0.71
CTSA-201ENST00000191018 MRPL34Q9BQ48 92 aaKnown RBP10.6□□□□□ -0.71
CTSA-201ENST00000191018 C8orf87E5RJ46 101 aa10.59□□□□□ -0.71
CTSA-201ENST00000191018 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
CTSA-201ENST00000191018 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
CTSA-201ENST00000191018 PKHD1L1Q86WI1 4243 aa10.58□□□□□ -0.72
CTSA-201ENST00000191018 TP53AIP1Q9HCN2 124 aa10.57□□□□□ -0.72
CTSA-201ENST00000191018 HSPG2P98160 4391 aa10.56□□□□□ -0.72
CTSA-201ENST00000191018 MP68P56378 58 aa10.55□□□□□ -0.72
CTSA-201ENST00000191018 H0Y9P7 68 aa10.53□□□□□ -0.72
CTSA-201ENST00000191018 TRAV22A0A0B4J277 110 aa10.52□□□□□ -0.73
CTSA-201ENST00000191018 FAM236DA0A1B0GTK5 79 aa10.52□□□□□ -0.73
CTSA-201ENST00000191018 H3BPC8 53 aa10.52□□□□□ -0.73
CTSA-201ENST00000191018 FAM236CP0DP71 79 aa10.52□□□□□ -0.73
CTSA-201ENST00000191018 Q5VSD8 79 aa10.52□□□□□ -0.73
CTSA-201ENST00000191018 RYR1P21817 5038 aa10.52□□□□□ -0.73
CTSA-201ENST00000191018 LINC00313P59037 77 aa10.51□□□□□ -0.73
CTSA-201ENST00000191018 NDUFS5O43920 106 aa10.49□□□□□ -0.73
CTSA-201ENST00000191018 LINC00208Q96KT6 92 aa10.49□□□□□ -0.73
CTSA-201ENST00000191018 KRTAP16-1A8MUX0 517 aa10.44□□□□□ -0.74
CTSA-201ENST00000191018 KRTAP17-1Q9BYP8 105 aa10.44□□□□□ -0.74
CTSA-201ENST00000191018 ATP5EP56381 51 aaPredicted RBP10.44□□□□□ -0.74
CTSA-201ENST00000191018 RPS28P62857 69 aaKnown RBP10.44□□□□□ -0.74
CTSA-201ENST00000191018 Q8N9P0 234 aaPredicted RBP10.44□□□□□ -0.74
CTSA-201ENST00000191018 C1orf64Q8NEQ6 169 aa10.44□□□□□ -0.74
CTSA-201ENST00000191018 KRTAP13-3Q3SY46 172 aa10.39□□□□□ -0.75
CTSA-201ENST00000191018 KIAA1109Q2LD37 5005 aa10.39□□□□□ -0.75
CTSA-201ENST00000191018 KRTAP10-8P60410 259 aa10.38□□□□□ -0.75
CTSA-201ENST00000191018 Q5W150 140 aa10.38□□□□□ -0.75
CTSA-201ENST00000191018 EPPK1P58107 5090 aaKnown RBP10.37□□□□□ -0.75
CTSA-201ENST00000191018 LRP1Q07954 4544 aaKnown RBP10.35□□□□□ -0.75
CTSA-201ENST00000191018 Q8N1X5 172 aa10.34□□□□□ -0.75
CTSA-201ENST00000191018 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
CTSA-201ENST00000191018 OXTP01178 125 aa10.34□□□□□ -0.75
CTSA-201ENST00000191018 TNXBP22105 4242 aa10.33□□□□□ -0.76
CTSA-201ENST00000191018 FLG2Q5D862 2391 aaPredicted RBP10.32□□□□□ -0.76
CTSA-201ENST00000191018 SPANXA2-OT1Q8N9U9 137 aa10.3□□□□□ -0.76
CTSA-201ENST00000191018 FAT3Q8TDW7 4589 aa10.28□□□□□ -0.76
CTSA-201ENST00000191018 CYP4F30PQ9H0H9 118 aa10.28□□□□□ -0.76
CTSA-201ENST00000191018 LOC101927531A0A1B0GV80 90 aa10.27□□□□□ -0.76
CTSA-201ENST00000191018 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
CTSA-201ENST00000191018 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
CTSA-201ENST00000191018 PRR4Q16378 134 aa10.22□□□□□ -0.77
CTSA-201ENST00000191018 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.78
CTSA-201ENST00000191018 MT1HL1P0DM35 61 aa10.19□□□□□ -0.78
CTSA-201ENST00000191018 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
CTSA-201ENST00000191018 IGKV2-30P06310 120 aa10.17□□□□□ -0.78
CTSA-201ENST00000191018 C20orf166-AS1Q96NR2 134 aa10.17□□□□□ -0.78
CTSA-201ENST00000191018 A8MUU9 505 aa10.15□□□□□ -0.78
CTSA-201ENST00000191018 MYCBP2O75592 4640 aa10.13□□□□□ -0.79
CTSA-201ENST00000191018 FP248Q71RG6 208 aaPredicted RBP10.12□□□□□ -0.79
CTSA-201ENST00000191018 SMIM26A0A096LP01 95 aa10.1□□□□□ -0.79
CTSA-201ENST00000191018 DMBT1Q9UGM3 2413 aaPredicted RBP10.08□□□□□ -0.8
CTSA-201ENST00000191018 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
CTSA-201ENST00000191018 HRES1P13985 223 aa10.06□□□□□ -0.8
CTSA-201ENST00000191018 IGKV2D-30A0A075B6S6 120 aa10.04□□□□□ -0.8
CTSA-201ENST00000191018 Q75L30 129 aa10.03□□□□□ -0.8
CTSA-201ENST00000191018 C7orf65Q6ZTY9 151 aa9.99□□□□□ -0.81
CTSA-201ENST00000191018 COA5Q86WW8 74 aa9.99□□□□□ -0.81
CTSA-201ENST00000191018 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
CTSA-201ENST00000191018 C4orf26Q17RF5 130 aa9.91□□□□□ -0.82
CTSA-201ENST00000191018 ACYP2P14621 99 aa9.9□□□□□ -0.82
CTSA-201ENST00000191018 XP32Q5T750 250 aa9.9□□□□□ -0.82
CTSA-201ENST00000191018 MPLKIPQ8TAP9 179 aa9.89□□□□□ -0.83
CTSA-201ENST00000191018 RPL37P61927 97 aaKnown RBP9.88□□□□□ -0.83
CTSA-201ENST00000191018 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
CTSA-201ENST00000191018 Q1T7F1 81 aa9.87□□□□□ -0.83
CTSA-201ENST00000191018 SPINK7P58062 85 aa9.85□□□□□ -0.83
CTSA-201ENST00000191018 ABCA13Q86UQ4 5058 aa9.84□□□□□ -0.83
CTSA-201ENST00000191018 ATP11AUNQ6ZP68 121 aa9.83□□□□□ -0.84
CTSA-201ENST00000191018 HERC2O95714 4834 aa9.83□□□□□ -0.84
CTSA-201ENST00000191018 TPRXLQ17RH7 258 aa9.81□□□□□ -0.84
CTSA-201ENST00000191018 V9GYY9 64 aa9.78□□□□□ -0.84
CTSA-201ENST00000191018 A8MUN3 132 aa9.76□□□□□ -0.85
CTSA-201ENST00000191018 CHKB-CPT1BH3BT56 60 aa9.72□□□□□ -0.85
CTSA-201ENST00000191018 J3QL48 77 aa9.7□□□□□ -0.86
CTSA-201ENST00000191018 KRTAP3-1Q9BYR8 98 aa9.7□□□□□ -0.86
CTSA-201ENST00000191018 LINC01558Q9Y6Z2 57 aa9.68□□□□□ -0.86
CTSA-201ENST00000191018 PSPHP1O15172 72 aa9.66□□□□□ -0.86
CTSA-201ENST00000191018 COX6B2Q6YFQ2 88 aa9.64□□□□□ -0.87
CTSA-201ENST00000191018 LRP2P98164 4655 aa9.63□□□□□ -0.87
CTSA-201ENST00000191018 LPAP08519 4548 aa9.61□□□□□ -0.87
CTSA-201ENST00000191018 Q5VV11 94 aa9.6□□□□□ -0.87
CTSA-201ENST00000191018 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
CTSA-201ENST00000191018 SPTSSBQ8NFR3 76 aa9.47□□□□□ -0.89
CTSA-201ENST00000191018 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
CTSA-201ENST00000191018 A0A1B0GU69 56 aa9.42□□□□□ -0.9
CTSA-201ENST00000191018 SEC61BP60468 96 aaKnown RBP9.42□□□□□ -0.9
CTSA-201ENST00000191018 PCLOQ9Y6V0 5065 aa9.4□□□□□ -0.9
CTSA-201ENST00000191018 PRO0628Q9UI54 55 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms