RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 TdhQ8K3F7 373 aa11.71□□□□□ -0.53
Pcdha11-202ENSMUST00000115657 Ighv8-6A0A0A6YXA3 118 aa11.71□□□□□ -0.53
Pcdha11-202ENSMUST00000115657 Ly86O88188 162 aa11.71□□□□□ -0.53
Pcdha11-202ENSMUST00000115657 Gm10767Q3TQP0 103 aa11.71□□□□□ -0.53
Pcdha11-202ENSMUST00000115657 Lypd8Q9D7S0 255 aa11.71□□□□□ -0.53
Pcdha11-202ENSMUST00000115657 Akap6E9Q9K8 2307 aa11.71□□□□□ -0.53
Pcdha11-202ENSMUST00000115657 A0A286YE02 88 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gm7075D3Z497 112 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gpx1P11352 201 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Mrpl32Q9DCI9 187 aaKnown RBP11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 GlrxQ9QUH0 107 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Trav7-1A0A0G2JEV5 112 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Sap30O88574 220 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gm10775Q3V290 127 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 PerpQ9JK95 193 aa11.71□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Trbv30A0A0B4J1P1 111 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Slc25a48Q8BW66 306 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Parm1Q923D3 296 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Nit2Q9JHW2 276 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Trbv31A0A075B5J5 111 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Defb30Q30KN4 75 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Trav2Q5R1I9 109 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Ighv1-31A0A0A6YWK5 117 aa11.7□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01802 115 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 MpdzQ8VBX6 2055 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01741 114 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Ccl6P27784 116 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gtsf1Q9DAN6 167 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Pcdh15Q99PJ1 1943 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Ros1Q78DX7 2340 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gm5129F6YHA9 99 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Vwc2lQ505H4 222 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Tpsg1Q9QUL7 311 aa11.69□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gm28269A0A087WSG3 125 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01788 123 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01790 122 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Igkv3-2A0A075B5P0 119 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Igkv6-15A0A140T8M5 115 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 MdfiP70331 251 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 A930003A15RikQ3U552 87 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Lrrk1Q3UHC2 2014 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Vwa8Q8CC88 1905 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Igkv4-90A0A075B5L3 117 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 IappP12968 93 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Hist1h1tQ07133 208 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Cd99Q8VCN6 175 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 8030423J24RikQ9CX45 142 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Pip4p2Q9CZX7 257 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 MsmbO08540 113 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Trav7-2Q5R1I3 112 aa11.68□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Igkv1-99F6XWB2 120 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Qrich2A0A140LIY9 2337 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Abca1P41233 2261 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01630 113 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P03980 138 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Lgals4Q8K419 326 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Rs1Q9Z1L4 224 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 RlfA2A7F4 1918 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gm10384Q3UQ87 92 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 VsirQ9D659 308 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Them7Q9DCP4 223 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01811 117 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Tex26Q0VB26 296 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Samd5Q3V1H9 173 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 1700001C19RikQ8K168 210 aa11.67□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Card19Q9D1I2 183 aa11.66□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Spata46Q4FZF2 204 aa11.66□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Zfhx2Q2MHN3 2562 aa11.66□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Tal2Q62282 108 aa11.66□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gm4763Q8CFJ5 196 aa11.66□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Stpg1Q9D2F5 341 aa11.66□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Trav12-3A0A075B648 115 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Ighv3-6P18531 116 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Tpsab1Q02844 273 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Taf15Q8BQ46 557 aaKnown RBP11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 PoleQ9WVF7 2283 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Ighv1-16A0A075B5U1 98 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Tctex1d4Q8CDY7 219 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 MrapQ9D159 127 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Trav14n-2A0A0G2JDF5 121 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 A0A1L1SR50 188 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Igkv4-62A0A0G2JDW9 117 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Igkv19-93A0A0G2JFZ3 115 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Gm2564F6Z9S8 108 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Ccl19O70460 108 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01724 129 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 P01727 129 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Zfp36l1P23950 338 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Xcl1P47993 114 aa11.65□□□□□ -0.54
Pcdha11-202ENSMUST00000115657 Heatr1G3X9B1 2143 aaKnown RBP11.65□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 Trav14-3A0A075B607 120 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 AmelxP63277 210 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 9930022D16RikQ8BG27 128 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 Ighv1-80A0A075B5Y3 117 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 Lamtor3O88653 124 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 CckP09240 115 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 Igkv4-57-1A0A075B5M4 119 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 Gm7102J3QQ10 178 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 Cep250Q60952 2414 aa11.64□□□□□ -0.55
Pcdha11-202ENSMUST00000115657 Prr14lE9Q7C4 1971 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 82.9 ms