RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Slamf7Q8BHK6 333 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Ccl6P27784 116 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Cited1P97769 203 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 RprmlQ3URD2 117 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 SelplgQ62170 397 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Tmprss5Q9ER04 455 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 IcosQ9WVS0 200 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Ighv1-77A0A0G2JGS9 117 aa17.66■□□□□ 0.42
Upf3a-201ENSMUST00000043767 SrstQ06666 185 aa17.66■□□□□ 0.42
Upf3a-201ENSMUST00000043767 V1ra8Q9EQ48 279 aa17.66■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Xirp2Q4U4S6 3784 aa17.66■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Gm20379A0A087WR34 119 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Khdc1bP0C7A0 126 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Vmn1r195Q5SVD6 316 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Gm9961Q8BNV2 113 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Gm12689Q8BQU9 117 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Q8C3M9 231 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Olfr748E9Q9Z0 307 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Gpm6bP35803 328 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Olfr262Q8VFV8 312 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Q9D7E4 109 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Bex1Q9R224 128 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 AplnrQ9WV08 377 aa17.65■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Crip1P63254 77 aa17.64■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Zfp462B1AWL2 2495 aaKnown RBP17.64■□□□□ 0.41
Upf3a-201ENSMUST00000043767 AponG3X9D6 251 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Phxr2P15972 65 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Plp1P60202 277 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Olfr148Q60887 310 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Olfr1262Q8VGN2 304 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Ighv1-74A0A0G2JGK2 117 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Gm12886B1AZM5 119 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Gm3250E9Q1M3 230 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 DdtO35215 118 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Olfr981Q8VEU2 310 aa17.63■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Trav12-3A0A075B648 115 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 P01792 123 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 V1rd19Q3KNP5 305 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Usmg5Q78IK2 58 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Ifitm2Q99J93 144 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Nhp2Q9CRB2 153 aaKnown RBP17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 P01801 115 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 P01802 115 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Gm9944Q8C559 102 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Slc25a39Q9D8K8 359 aa17.62■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Trav14n-3A0A075B645 120 aa17.61■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Shisa9Q9CZN4 424 aa17.61■□□□□ 0.41
Upf3a-201ENSMUST00000043767 P0C1Z5 52 aa17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Isg15Q64339 161 aaKnown RBP17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Olfr1381Q7TQT4 311 aa17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Olfr1373Q7TQT6 311 aa17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Olfr996Q7TRA0 314 aa17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Trappc2lQ9JME7 139 aa17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Ebi3O35228 228 aa17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Fam241bQ9D882 120 aa17.6■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Gm6970F7DCP6 221 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Ube2g1P62254 170 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Ang2Q64438 145 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Olfr1243Q8VGM7 305 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Fam103a1Q9CQY2 119 aaKnown RBP17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Crlf1Q9JM58 425 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Sorl1O88307 2215 aaKnown RBP17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Slc17a2Q5SZA1 478 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Plpp2Q9DAX2 276 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Pla2g2eQ9QUL3 142 aa17.59■□□□□ 0.41
Upf3a-201ENSMUST00000043767 Gm26661M0QWV4 156 aa17.58■□□□□ 0.4
Upf3a-201ENSMUST00000043767 P01727 129 aa17.58■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Fam19a2Q7TPG7 131 aa17.58■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Igkv4-90A0A075B5L3 117 aa17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Ly86O88188 162 aa17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Tcrg-C2A0A075B5Z2 167 aa17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Zfp979A2A799 407 aa17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 P01853 167 aa17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Slc25a5P51881 298 aaKnown RBP17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Pex7P97865 318 aa17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Psg25Q497W1 475 aa17.57■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Setd2E9Q5F9 2537 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Ighv1-16A0A075B5U1 98 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm6525A0A0A6YW33 106 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Ighv8-6A0A0A6YXA3 118 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gng5Q80SZ7 68 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Spock3Q8BKV0 436 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Olfr1256Q8VGP1 306 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Tax1bp3Q9DBG9 124 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm10036E9PYL9 178 aaKnown RBP17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Srp14P16254 110 aaKnown RBP17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 CtsgP28293 261 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Plscr4P58196 326 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Olfr1380Q7TQT5 311 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Tnfsf18Q7TS55 173 aa17.56■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Olfr1192-ps1A0A1L1SRD7 309 aa17.55■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Lcn2P11672 200 aa17.55■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm11733Q8BQP1 125 aa17.55■□□□□ 0.4
Upf3a-201ENSMUST00000043767 RnasekQ8K3C0 98 aa17.55■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm14214V9GX35 225 aa17.55■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Akap13E9Q394 2776 aa17.55■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Ssbp1Q9CYR0 152 aaKnown RBP17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Susd2Q9DBX3 820 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 9530053A07RikE9PVG8 2581 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Trav9d-1A0A075B699 112 aa17.54■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms