RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Ss18Q62280 418 aa14.88□□□□□ -0.03
Ebf3-201ENSMUST00000033378 SrcapA0A087WQ44 3271 aa14.88□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ear14F6YUX7 155 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Rbfox3Q8BIF2 374 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 1700001C19RikQ8K168 210 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Phpt1Q9DAK9 124 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ighv1-31A0A0A6YWK5 117 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ighv1-19A0A0A6YWX0 117 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 AmelxP63277 210 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 9930022D16RikQ8BG27 128 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Med13lQ6JPI3 2207 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Mtatp8P03930 67 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Olfr317Q5NCD6 327 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Rchy1Q9CR50 261 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ighv1-69A0A0G2JFS5 117 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ccl12Q62401 104 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 F930015N05RikQ8C3A3 210 aa14.87□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Igkv19-93A0A0G2JFZ3 115 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Dmrt3Q80WT2 476 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Itgb1bp1O35671 200 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Spsb3Q571F5 354 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ttc9cQ810A3 171 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Tnrc6aQ3UHK8 1896 aaKnown RBP14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 P0C1Z5 52 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Pde6hP61249 83 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Defa23Q5G866 93 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Trav12-3A0A075B648 115 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Trav12d-3A0A075B6A4 115 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 P01793 123 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ca1P13634 261 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Ndufc2Q9CQ54 120 aa14.86□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Igsf23B2RTN2 239 aa14.85□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Muc15Q8C6Z1 331 aa14.85□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Tmem40Q4FJU9 225 aa14.84□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Gm11020F6ZGD5 61 aa14.84□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Defa16P50714 93 aa14.84□□□□□ -0.03
Ebf3-201ENSMUST00000033378 KprpB2RUR4 657 aa14.83□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Zfp648D3Z0W3 525 aa14.83□□□□□ -0.03
Ebf3-201ENSMUST00000033378 TtrP07309 147 aa14.83□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Foxf1Q61080 378 aa14.83□□□□□ -0.03
Ebf3-201ENSMUST00000033378 Trdv5A0A075B661 115 aa14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Igkv6-15A0A140T8M5 115 aa14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 P01811 117 aa14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Prr3Q811B5 190 aaKnown RBP14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 OtosQ8R448 89 aa14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Lyg1Q9D7Q0 197 aa14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 PtprsB0V2N1 1907 aa14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Tmem238A9JSM3 176 aa14.83□□□□□ -0.04
Ebf3-201ENSMUST00000033378 ElaneQ3UP87 265 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Thap8E9Q695 213 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 TdhQ8K3F7 373 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Fbxl15Q91W61 300 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Stpg1Q9D2F5 341 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Ly6g6dQ9Z1Q3 135 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Trav14-3A0A075B607 120 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Trav14n-2A0A0G2JDF5 121 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Gm6040Q4QY32 63 aa14.82□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Crybg1A0A0G2JG52 2065 aa14.81□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Lsm4Q9QXA5 137 aaKnown RBP14.81□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Nat8b-psE0CYC6 232 aa14.81□□□□□ -0.04
Ebf3-201ENSMUST00000033378 3110082J24RikF6Z6Z2 108 aa14.81□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Il1f10Q8R459 152 aa14.81□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Gm29423A0A087WRM1 55 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Defb30Q30KN4 75 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 P01649 108 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Reg1P43137 165 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Gm19684G3UZ45 117 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Tpsab1Q02844 273 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Trav7d-3Q5R1I1 112 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Trip12G5E870 2025 aaKnown RBP14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Trav6-4A0A075B6B4 115 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Wt1P22561 449 aa14.8□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Ighv6-7A0A0A6YWU3 119 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Gm26727M0QWT1 121 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 4930596D02RikQ3V0H9 216 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Fhl4Q8CDC8 279 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 3110018I06RikQ9CXS0 120 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Ncoa6Q9JL19 2067 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Plxnb1Q8CJH3 2119 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Tcrg-C3L7N479 172 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 P03985 172 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 MdfiP70331 251 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Lrcol1Q3URS3 161 aa14.79□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Loxl1P97873 607 aa14.78□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Them7Q9DCP4 223 aa14.78□□□□□ -0.04
Ebf3-201ENSMUST00000033378 3110021N24RikJ3QMN2 152 aa14.78□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Ighv1-62-3P01754 117 aa14.78□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Ighv1-16A0A075B5U1 98 aa14.78□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Tmem88bQ3TYP4 173 aa14.78□□□□□ -0.04
Ebf3-201ENSMUST00000033378 SNORCQ9CXL7 121 aa14.78□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Brd3osA0A1B0GRB6 84 aa14.77□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Prdm6Q3UZD5 596 aa14.77□□□□□ -0.04
Ebf3-201ENSMUST00000033378 P01791 123 aa14.77□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Gm26558Q8BLW8 286 aa14.77□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Gm11733Q8BQP1 125 aa14.77□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Prss58Q8BW11 241 aa14.77□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Anapc1P53995 1944 aaKnown RBP14.77□□□□□ -0.04
Ebf3-201ENSMUST00000033378 Ighv1-55A0A075B5W6 117 aa14.77□□□□□ -0.05
Ebf3-201ENSMUST00000033378 Trav6n-6A0A075B6B2 114 aa14.77□□□□□ -0.05
Ebf3-201ENSMUST00000033378 Gm33815A0A087WNV3 176 aa14.77□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms