RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 4930412O13RikQ9D5M9 106 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Rnase4Q9JJH1 148 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Ighv8-12A0A0G2JDE1 119 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gm6096D3YTY6 151 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Cacna1bO55017 2327 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Iglc1A0A0G2JE99 106 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Fxyd3Q61835 88 aa13.12□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Nxph4G3X9N5 304 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 P06330 118 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gfra1P97785 468 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Ndufa4l2Q4FZG9 87 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Ptrh2Q8R2Y8 181 aaKnown RBP13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Defa13P50711 93 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 PirtQ8BFY0 135 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Olfr1431Q8VF59 312 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Atp6v0bQ91V37 205 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 PdpnQ62011 172 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Cdip1Q9DB75 208 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Icam4Q9ERM2 262 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Dkk2Q9QYZ8 259 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Arfgef3Q3UGY8 2170 aa13.11□□□□□ -0.31
Ctcf-201ENSMUST00000005841 PlnP61014 52 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Olfr19Q9JHB2 309 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Clec5aQ9R007 190 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 DspE9Q557 2883 aaKnown RBP13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Dnajc13D4AFX7 2248 aaKnown RBP13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 P18529 117 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gpm6bP35803 328 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Trav6d-4Q5R1I0 115 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Tff3Q62395 81 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Pygo1Q9D0P5 417 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Erg28Q9ERY9 140 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Trav9d-1A0A075B699 112 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 P01741 114 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gpx1P11352 201 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Cep290Q6A078 2472 aa13.1□□□□□ -0.31
Ctcf-201ENSMUST00000005841 P01843 105 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gm10277Q6R5C6 214 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 A730015C16RikQ8C992 119 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Errfi1Q99JZ7 461 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Sh2d6Q9D413 297 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Pear1Q8VIK5 1034 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Vmn1r63Q9EPT1 300 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Tctex1d1Q9D5I4 173 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Dusp14Q9JLY7 198 aa13.09□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Gm15293D3YX02 93 aa13.08□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Psmb11Q8BG41 302 aa13.08□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Olfr1256Q8VGP1 306 aa13.08□□□□□ -0.31
Ctcf-201ENSMUST00000005841 Esp4A8R0T8 117 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 B1ARW8 110 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 YrdcQ3U5F4 280 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Cryba4Q9JJV0 196 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Trank1Q8BV79 2999 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 P18526 117 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Tcl1b4P56844 120 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Q3UNZ8 350 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Hoxc12Q8K5B8 280 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Olfr1242Q8VGM6 306 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Trappc2lQ9JME7 139 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Frem1Q684R7 2191 aa13.08□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Zfp493E9Q1L8 384 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Gng4P50153 75 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 OtorQ9JIE3 128 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Trbv26A0A0B4J1P5 115 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Tmem116A0A0G2JGD3 401 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Sub1P11031 127 aaKnown RBP13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Timm8bP62077 83 aaKnown RBP13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Ctsll3Q3ULP7 331 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Ss18Q62280 418 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Tmem160Q9D938 188 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Trav3-1Q5R1I8 114 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Tnfrsf23Q9ER63 176 aa13.07□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Olfr235E9Q9Z6 312 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Hbb-bsA8DUK4 147 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Gm26965M0QWH4 86 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Hbb-b1P02088 147 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Ripply2Q2WG76 128 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Chac1Q8R3J5 223 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Spata45Q9CVW4 97 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Ighv9-1A0A0B4J1P3 117 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Runx1Q03347 451 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Slamf6Q9ET39 351 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Snai3Q9QY31 287 aa13.06□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Trbv31A0A075B5J5 111 aa13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Dynlrb1P62627 96 aa13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 AhspQ9CY02 102 aa13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Lama5Q61001 3718 aa13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Ighv5-9A0A075B5Q2 117 aa13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Zcchc24B2RVL6 241 aaKnown RBP13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Obox8V9GWY9 217 aa13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 NpbQ8K4P1 119 aa13.05□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Olfr1185-ps1F6XP16 303 aa13.04□□□□□ -0.32
Ctcf-201ENSMUST00000005841 EppinQ9DA01 134 aa13.04□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Tcrg-C1A0A075B5Z0 172 aa13.04□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Bsph2Q0Q236 131 aa13.04□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Scgb2b24Q7M747 112 aa13.04□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Trav7-5A0A0G2JFX6 112 aa13.04□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Olfr365Q8VFT2 312 aa13.04□□□□□ -0.32
Ctcf-201ENSMUST00000005841 1700003H04RikE9PXM2 192 aa13.03□□□□□ -0.32
Ctcf-201ENSMUST00000005841 MrapQ9D159 127 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms