RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	SMCP	P49901	116 aa	Predicted RBP	10.61	□□□□□ -0.71
SPIN3-238	ENST00000640421	TEX49	A0A1B0GTD5	131 aa		10.61	□□□□□ -0.71
SPIN3-238	ENST00000640421	LINC00483	Q53H64	154 aa		10.61	□□□□□ -0.71
SPIN3-238	ENST00000640421	OCIAD2	Q56VL3	154 aa		10.61	□□□□□ -0.71
SPIN3-238	ENST00000640421	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.61	□□□□□ -0.71
SPIN3-238	ENST00000640421	SPRR1B	P22528	89 aa		10.6	□□□□□ -0.71
SPIN3-238	ENST00000640421	SMIM29	Q86T20	159 aa		10.6	□□□□□ -0.71
SPIN3-238	ENST00000640421	FAT3	Q8TDW7	4589 aa		10.59	□□□□□ -0.71
SPIN3-238	ENST00000640421	FLG2	Q5D862	2391 aa	Predicted RBP	10.58	□□□□□ -0.72
SPIN3-238	ENST00000640421	TMEM256-PLSCR3	K7ERE1	68 aa		10.57	□□□□□ -0.72
SPIN3-238	ENST00000640421		H3BT86	120 aa		10.56	□□□□□ -0.72
SPIN3-238	ENST00000640421	ANKRD29	Q8N6D5	301 aa		10.56	□□□□□ -0.72
SPIN3-238	ENST00000640421	PPDPFL	Q8WWR9	84 aa		10.56	□□□□□ -0.72
SPIN3-238	ENST00000640421		A0A087X002	238 aa		10.55	□□□□□ -0.72
SPIN3-238	ENST00000640421		A0A1B0GV72	72 aa		10.53	□□□□□ -0.72
SPIN3-238	ENST00000640421	NDUFV3	P56181	108 aa	Known RBP	10.53	□□□□□ -0.72
SPIN3-238	ENST00000640421	LINC01600	Q96MT4	127 aa		10.53	□□□□□ -0.72
SPIN3-238	ENST00000640421	TNXB	P22105	4242 aa		10.53	□□□□□ -0.72
SPIN3-238	ENST00000640421		F8W1H4	67 aa		10.53	□□□□□ -0.72
SPIN3-238	ENST00000640421	GHRH	P01286	108 aa		10.53	□□□□□ -0.72
SPIN3-238	ENST00000640421		H3BQ85	93 aa		10.52	□□□□□ -0.73
SPIN3-238	ENST00000640421	KRTAP13-2	Q52LG2	175 aa		10.51	□□□□□ -0.73
SPIN3-238	ENST00000640421	LAMTOR3	Q9UHA4	124 aa		10.51	□□□□□ -0.73
SPIN3-238	ENST00000640421	IGLV9-49	A0A0B4J1Y8	123 aa		10.5	□□□□□ -0.73
SPIN3-238	ENST00000640421	FAM229B	Q4G0N7	80 aa		10.49	□□□□□ -0.73
SPIN3-238	ENST00000640421	PRR26	Q8N8Z3	221 aa		10.47	□□□□□ -0.73
SPIN3-238	ENST00000640421		A0A0G2JQZ4	141 aa		10.46	□□□□□ -0.74
SPIN3-238	ENST00000640421		K7ERU9	68 aa		10.46	□□□□□ -0.74
SPIN3-238	ENST00000640421	CRYGA	P11844	174 aa		10.46	□□□□□ -0.74
SPIN3-238	ENST00000640421	MOBP	Q13875	183 aa		10.46	□□□□□ -0.74
SPIN3-238	ENST00000640421	ETDB	Q3ZM63	59 aa		10.45	□□□□□ -0.74
SPIN3-238	ENST00000640421	OBSCN-AS1	Q96MR7	158 aa		10.45	□□□□□ -0.74
SPIN3-238	ENST00000640421		F8WEM9	126 aa		10.44	□□□□□ -0.74
SPIN3-238	ENST00000640421	C9orf153	Q5TBE3	101 aa		10.44	□□□□□ -0.74
SPIN3-238	ENST00000640421	IGLV8-61	A0A075B6I0	122 aa		10.44	□□□□□ -0.74
SPIN3-238	ENST00000640421	PCLO	Q9Y6V0	5065 aa		10.44	□□□□□ -0.74
SPIN3-238	ENST00000640421	TEN1	Q86WV5	123 aa		10.42	□□□□□ -0.74
SPIN3-238	ENST00000640421	RBM3	P98179	157 aa	Known RBP	10.41	□□□□□ -0.74
SPIN3-238	ENST00000640421		Q8NBF4	154 aa		10.41	□□□□□ -0.74
SPIN3-238	ENST00000640421	C14orf132	Q9NPU4	83 aa		10.41	□□□□□ -0.74
SPIN3-238	ENST00000640421	JMJD7-PLA2G4B	H0Y9G9	81 aa		10.4	□□□□□ -0.74
SPIN3-238	ENST00000640421	IGFL1	Q6UW32	110 aa		10.4	□□□□□ -0.74
SPIN3-238	ENST00000640421	TRBV7-4	A0A0J9YYF1	115 aa		10.39	□□□□□ -0.75
SPIN3-238	ENST00000640421	VPS25	Q9BRG1	176 aa		10.38	□□□□□ -0.75
SPIN3-238	ENST00000640421	TYMSOS	Q8TAI1	123 aa		10.38	□□□□□ -0.75
SPIN3-238	ENST00000640421	DSCR8	Q96T75	97 aa		10.36	□□□□□ -0.75
SPIN3-238	ENST00000640421		Q6JHZ5	121 aa		10.35	□□□□□ -0.75
SPIN3-238	ENST00000640421	SSBP3-AS1	Q7Z2R9	100 aa		10.35	□□□□□ -0.75
SPIN3-238	ENST00000640421	KRTAP10-8	P60410	259 aa		10.34	□□□□□ -0.75
SPIN3-238	ENST00000640421		Q6ZQT0	140 aa		10.34	□□□□□ -0.75
SPIN3-238	ENST00000640421	LOC110117498	A0A087WWA1	95 aa		10.34	□□□□□ -0.75
SPIN3-238	ENST00000640421		A0A1W2PNM2	257 aa		10.33	□□□□□ -0.76
SPIN3-238	ENST00000640421	MT1HL1	P0DM35	61 aa		10.33	□□□□□ -0.76
SPIN3-238	ENST00000640421	HRCT1	Q6UXD1	115 aa		10.31	□□□□□ -0.76
SPIN3-238	ENST00000640421	CCK	P06307	115 aa		10.3	□□□□□ -0.76
SPIN3-238	ENST00000640421	OXT	P01178	125 aa		10.28	□□□□□ -0.76
SPIN3-238	ENST00000640421	PDE6G	P18545	87 aa		10.26	□□□□□ -0.77
SPIN3-238	ENST00000640421	LINC00304	Q8N9R0	145 aa		10.26	□□□□□ -0.77
SPIN3-238	ENST00000640421	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.25	□□□□□ -0.77
SPIN3-238	ENST00000640421		J3QR89	54 aa		10.25	□□□□□ -0.77
SPIN3-238	ENST00000640421	PCP4	P48539	62 aa		10.25	□□□□□ -0.77
SPIN3-238	ENST00000640421	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.25	□□□□□ -0.77
SPIN3-238	ENST00000640421		Q6Q795	121 aa		10.25	□□□□□ -0.77
SPIN3-238	ENST00000640421	CD164	Q04900	197 aa		10.23	□□□□□ -0.77
SPIN3-238	ENST00000640421	TRBV7-7	A0A0K0K1E9	115 aa		10.22	□□□□□ -0.77
SPIN3-238	ENST00000640421		A0A087WSZ3	146 aa		10.2	□□□□□ -0.78
SPIN3-238	ENST00000640421	C21orf62-AS1	Q17RA5	79 aa		10.19	□□□□□ -0.78
SPIN3-238	ENST00000640421	C4orf48	Q5BLP8	95 aa		10.19	□□□□□ -0.78
SPIN3-238	ENST00000640421	SPINK1	P00995	79 aa		10.18	□□□□□ -0.78
SPIN3-238	ENST00000640421	SPAG11A	Q6PDA7	123 aa		10.17	□□□□□ -0.78
SPIN3-238	ENST00000640421	LINC00846	Q9NV44	126 aa		10.15	□□□□□ -0.79
SPIN3-238	ENST00000640421		A0A1B0GW54	56 aa		10.13	□□□□□ -0.79
SPIN3-238	ENST00000640421	RPS29	P62273	56 aa	Known RBP	10.13	□□□□□ -0.79
SPIN3-238	ENST00000640421	SIGMAR1	Q99720	223 aa		10.13	□□□□□ -0.79
SPIN3-238	ENST00000640421	CDIP1	Q9H305	208 aa		10.12	□□□□□ -0.79
SPIN3-238	ENST00000640421		J3QL48	77 aa		10.11	□□□□□ -0.79
SPIN3-238	ENST00000640421		Q5XG85	94 aa		10.11	□□□□□ -0.79
SPIN3-238	ENST00000640421	HERC1	Q15751	4861 aa		10.11	□□□□□ -0.79
SPIN3-238	ENST00000640421	FAM240A	A0A1B0GVK7	77 aa		10.1	□□□□□ -0.79
SPIN3-238	ENST00000640421	LIMD2	Q9BT23	127 aa		10.09	□□□□□ -0.79
SPIN3-238	ENST00000640421		Q96NJ1	140 aa		10.08	□□□□□ -0.8
SPIN3-238	ENST00000640421	SS18L2	Q9UHA2	77 aa		10.08	□□□□□ -0.8
SPIN3-238	ENST00000640421	ACYP1	P07311	99 aa		10.06	□□□□□ -0.8
SPIN3-238	ENST00000640421	ASB16-AS1	Q495Z4	193 aa		10.06	□□□□□ -0.8
SPIN3-238	ENST00000640421		Q6ZVQ6	151 aa		10.06	□□□□□ -0.8
SPIN3-238	ENST00000640421	RETNLB	Q9BQ08	111 aa		10.06	□□□□□ -0.8
SPIN3-238	ENST00000640421	DEFB116	Q30KQ4	102 aa		10.05	□□□□□ -0.8
SPIN3-238	ENST00000640421	LINC00472	Q9H8W2	130 aa		10.05	□□□□□ -0.8
SPIN3-238	ENST00000640421	NREP	Q16612	68 aa		10.04	□□□□□ -0.8
SPIN3-238	ENST00000640421	C1orf195	Q5TG92	126 aa		10.04	□□□□□ -0.8
SPIN3-238	ENST00000640421	SCGB1A1	P11684	91 aa		10.02	□□□□□ -0.8
SPIN3-238	ENST00000640421	UBL5	Q9BZL1	73 aa		10.02	□□□□□ -0.81
SPIN3-238	ENST00000640421	MT-ATP8	P03928	68 aa		10	□□□□□ -0.81
SPIN3-238	ENST00000640421	IGKV4-1	P06312	121 aa		9.96	□□□□□ -0.82
SPIN3-238	ENST00000640421	DSCR10	P59022	87 aa		9.93	□□□□□ -0.82
SPIN3-238	ENST00000640421	KRTAP3-3	Q9BYR6	98 aa		9.93	□□□□□ -0.82
SPIN3-238	ENST00000640421	KRTAP3-2	Q9BYR7	98 aa		9.93	□□□□□ -0.82
SPIN3-238	ENST00000640421	BPY2	O14599	106 aa		9.92	□□□□□ -0.82
SPIN3-238	ENST00000640421	IGKV3D-7	A0A0C4DH55	119 aa		9.89	□□□□□ -0.83
SPIN3-238	ENST00000640421		J3KT08	172 aa		9.89	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms