RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 LUZP6Q538Z0 58 aa9□□□□□ -0.97
HNRNPU-226ENST00000640218 S4R3F8 94 aa8.97□□□□□ -0.97
HNRNPU-226ENST00000640218 MKI67P46013 3256 aaKnown RBP8.96□□□□□ -0.98
HNRNPU-226ENST00000640218 Q75L30 129 aa8.95□□□□□ -0.98
HNRNPU-226ENST00000640218 DNAH14Q0VDD8 3507 aa8.95□□□□□ -0.98
HNRNPU-226ENST00000640218 CSAG1Q6PB30 78 aa8.94□□□□□ -0.98
HNRNPU-226ENST00000640218 Q5W150 140 aa8.93□□□□□ -0.98
HNRNPU-226ENST00000640218 SEC61BP60468 96 aaKnown RBP8.93□□□□□ -0.98
HNRNPU-226ENST00000640218 KRTAP1-5Q9BYS1 174 aa8.93□□□□□ -0.98
HNRNPU-226ENST00000640218 CFAP54Q96N23 3096 aa8.93□□□□□ -0.98
HNRNPU-226ENST00000640218 LINC00472Q9H8W2 130 aa8.92□□□□□ -0.98
HNRNPU-226ENST00000640218 VCANP13611 3396 aa8.91□□□□□ -0.98
HNRNPU-226ENST00000640218 LINC01558Q9Y6Z2 57 aa8.9□□□□□ -0.98
HNRNPU-226ENST00000640218 AKAP13Q12802 2813 aa8.9□□□□□ -0.98
HNRNPU-226ENST00000640218 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
HNRNPU-226ENST00000640218 SPRR1BP22528 89 aa8.9□□□□□ -0.99
HNRNPU-226ENST00000640218 SPINK7P58062 85 aa8.89□□□□□ -0.99
HNRNPU-226ENST00000640218 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
HNRNPU-226ENST00000640218 CENPEQ02224 2701 aa8.88□□□□□ -0.99
HNRNPU-226ENST00000640218 H3BS24 57 aa8.87□□□□□ -0.99
HNRNPU-226ENST00000640218 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
HNRNPU-226ENST00000640218 UNC80Q8N2C7 3258 aa8.85□□□□□ -0.99
HNRNPU-226ENST00000640218 CHD6Q8TD26 2715 aa8.84□□□□□ -0.99
HNRNPU-226ENST00000640218 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
HNRNPU-226ENST00000640218 CDH23Q9H251 3354 aa8.84□□□□□ -0.99
HNRNPU-226ENST00000640218 KRTAP10-1P60331 282 aa8.84□□□□□ -1
HNRNPU-226ENST00000640218 KRTAP10-2P60368 255 aa8.82□□□□□ -1
HNRNPU-226ENST00000640218 R4GN34 69 aa8.81□□□□□ -1
HNRNPU-226ENST00000640218 MGAQ8IWI9 3026 aa8.8□□□□□ -1
HNRNPU-226ENST00000640218 Q5XG85 94 aa8.8□□□□□ -1
HNRNPU-226ENST00000640218 TEX15Q9BXT5 2789 aa8.8□□□□□ -1
HNRNPU-226ENST00000640218 STAB1Q9NY15 2570 aa8.8□□□□□ -1
HNRNPU-226ENST00000640218 CHD9Q3L8U1 2897 aa8.79□□□□□ -1
HNRNPU-226ENST00000640218 FP248Q71RG6 208 aaPredicted RBP8.79□□□□□ -1
HNRNPU-226ENST00000640218 PRAC1Q96KF2 57 aa8.78□□□□□ -1
HNRNPU-226ENST00000640218 Q5VV11 94 aa8.77□□□□□ -1
HNRNPU-226ENST00000640218 REV3LO60673 3130 aa8.76□□□□□ -1.01
HNRNPU-226ENST00000640218 OXTP01178 125 aa8.76□□□□□ -1.01
HNRNPU-226ENST00000640218 BAHCC1Q9P281 2608 aa8.76□□□□□ -1.01
HNRNPU-226ENST00000640218 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
HNRNPU-226ENST00000640218 RANBP2P49792 3224 aaKnown RBP8.75□□□□□ -1.01
HNRNPU-226ENST00000640218 SETXQ7Z333 2677 aaKnown RBP8.75□□□□□ -1.01
HNRNPU-226ENST00000640218 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
HNRNPU-226ENST00000640218 NBEAL1Q6ZS30 2694 aa8.72□□□□□ -1.01
HNRNPU-226ENST00000640218 SPEGQ15772 3267 aa8.71□□□□□ -1.01
HNRNPU-226ENST00000640218 MYO15AQ9UKN7 3530 aa8.71□□□□□ -1.01
HNRNPU-226ENST00000640218 PANO1I0J062 215 aa8.71□□□□□ -1.02
HNRNPU-226ENST00000640218 SZT2Q5T011 3432 aa8.69□□□□□ -1.02
HNRNPU-226ENST00000640218 TEP1Q99973 2627 aaKnown RBP8.69□□□□□ -1.02
HNRNPU-226ENST00000640218 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.03
HNRNPU-226ENST00000640218 M0QZ58 72 aa8.65□□□□□ -1.03
HNRNPU-226ENST00000640218 A0A0A0MQY5 61 aa8.64□□□□□ -1.03
HNRNPU-226ENST00000640218 KRTAP4-16G5E9R7 235 aaPredicted RBP8.64□□□□□ -1.03
HNRNPU-226ENST00000640218 WDFY4Q6ZS81 3184 aa8.63□□□□□ -1.03
HNRNPU-226ENST00000640218 Q6ZR54 194 aa8.62□□□□□ -1.03
HNRNPU-226ENST00000640218 GCN1Q92616 2671 aaKnown RBP8.62□□□□□ -1.03
HNRNPU-226ENST00000640218 H1FX-AS1Q4G0G2 97 aa8.62□□□□□ -1.03
HNRNPU-226ENST00000640218 A0A087X002 238 aa8.61□□□□□ -1.03
HNRNPU-226ENST00000640218 TRIOO75962 3097 aa8.61□□□□□ -1.03
HNRNPU-226ENST00000640218 TRANK1O15050 2925 aa8.61□□□□□ -1.03
HNRNPU-226ENST00000640218 UNC79Q9P2D8 2635 aa8.6□□□□□ -1.03
HNRNPU-226ENST00000640218 ROMO1P60602 79 aa8.6□□□□□ -1.03
HNRNPU-226ENST00000640218 WDFY3Q8IZQ1 3526 aa8.58□□□□□ -1.04
HNRNPU-226ENST00000640218 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
HNRNPU-226ENST00000640218 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
HNRNPU-226ENST00000640218 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
HNRNPU-226ENST00000640218 SPTBN5Q9NRC6 3674 aaKnown RBP8.57□□□□□ -1.04
HNRNPU-226ENST00000640218 COL6A5A8TX70 2615 aa8.56□□□□□ -1.04
HNRNPU-226ENST00000640218 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
HNRNPU-226ENST00000640218 ZNF292O60281 2723 aa8.55□□□□□ -1.04
HNRNPU-226ENST00000640218 LAMA1P25391 3075 aa8.54□□□□□ -1.04
HNRNPU-226ENST00000640218 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
HNRNPU-226ENST00000640218 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
HNRNPU-226ENST00000640218 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
HNRNPU-226ENST00000640218 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-226ENST00000640218 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
HNRNPU-226ENST00000640218 KRTAP11-1Q8IUC1 163 aa8.48□□□□□ -1.05
HNRNPU-226ENST00000640218 DSPP15924 2871 aaKnown RBP8.46□□□□□ -1.05
HNRNPU-226ENST00000640218 MAP1AP78559 2803 aaPredicted RBP8.45□□□□□ -1.06
HNRNPU-226ENST00000640218 FRYQ5TBA9 3013 aa8.45□□□□□ -1.06
HNRNPU-226ENST00000640218 VPS13AQ96RL7 3174 aa8.44□□□□□ -1.06
HNRNPU-226ENST00000640218 CELSR3Q9NYQ7 3312 aa8.43□□□□□ -1.06
HNRNPU-226ENST00000640218 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
HNRNPU-226ENST00000640218 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.06
HNRNPU-226ENST00000640218 FREM2Q5SZK8 3169 aa8.4□□□□□ -1.07
HNRNPU-226ENST00000640218 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
HNRNPU-226ENST00000640218 IGSF10Q6WRI0 2623 aa8.37□□□□□ -1.07
HNRNPU-226ENST00000640218 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
HNRNPU-226ENST00000640218 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
HNRNPU-226ENST00000640218 ITPR2Q14571 2701 aa8.34□□□□□ -1.07
HNRNPU-226ENST00000640218 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
HNRNPU-226ENST00000640218 STAB2Q8WWQ8 2551 aa8.32□□□□□ -1.08
HNRNPU-226ENST00000640218 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
HNRNPU-226ENST00000640218 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
HNRNPU-226ENST00000640218 A8MUU9 505 aa8.3□□□□□ -1.08
HNRNPU-226ENST00000640218 A8MU10 97 aa8.29□□□□□ -1.08
HNRNPU-226ENST00000640218 KALRNO60229 2985 aa8.27□□□□□ -1.09
HNRNPU-226ENST00000640218 FRYLO94915 3013 aa8.26□□□□□ -1.09
HNRNPU-226ENST00000640218 DMDP11532 3685 aa8.24□□□□□ -1.09
HNRNPU-226ENST00000640218 KRTAP13-1Q8IUC0 172 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms