RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 MAST4O15021 2626 aa10.01□□□□□ -0.81
CACNA1A-221ENST00000636012 TRIOO75962 3097 aa9.98□□□□□ -0.81
CACNA1A-221ENST00000636012 PRUNE2Q8WUY3 3088 aa9.96□□□□□ -0.81
CACNA1A-221ENST00000636012 DMAC1Q96GE9 116 aa9.94□□□□□ -0.82
CACNA1A-221ENST00000636012 KRTAP1-1Q07627 177 aa9.94□□□□□ -0.82
CACNA1A-221ENST00000636012 HELZ2Q9BYK8 2649 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-221ENST00000636012 FREM2Q5SZK8 3169 aa9.93□□□□□ -0.82
CACNA1A-221ENST00000636012 CHD6Q8TD26 2715 aa9.92□□□□□ -0.82
CACNA1A-221ENST00000636012 BRCA2P51587 3418 aa9.92□□□□□ -0.82
CACNA1A-221ENST00000636012 C20orf166-AS1Q96NR2 134 aa9.91□□□□□ -0.82
CACNA1A-221ENST00000636012 DNAH14Q0VDD8 3507 aa9.91□□□□□ -0.82
CACNA1A-221ENST00000636012 M0QZ58 72 aa9.91□□□□□ -0.82
CACNA1A-221ENST00000636012 Q8N9P0 234 aaPredicted RBP9.91□□□□□ -0.82
CACNA1A-221ENST00000636012 TEX15Q9BXT5 2789 aa9.9□□□□□ -0.82
CACNA1A-221ENST00000636012 LAMA3Q16787 3333 aa9.88□□□□□ -0.83
CACNA1A-221ENST00000636012 FAM229BQ4G0N7 80 aa9.87□□□□□ -0.83
CACNA1A-221ENST00000636012 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
CACNA1A-221ENST00000636012 CHD7Q9P2D1 2997 aa9.87□□□□□ -0.83
CACNA1A-221ENST00000636012 OCR1Q9BZK8 76 aa9.85□□□□□ -0.83
CACNA1A-221ENST00000636012 STAB1Q9NY15 2570 aa9.85□□□□□ -0.83
CACNA1A-221ENST00000636012 CENPEQ02224 2701 aa9.85□□□□□ -0.83
CACNA1A-221ENST00000636012 RANBP2P49792 3224 aaKnown RBP9.83□□□□□ -0.84
CACNA1A-221ENST00000636012 MGAQ8IWI9 3026 aa9.81□□□□□ -0.84
CACNA1A-221ENST00000636012 VPS13AQ96RL7 3174 aa9.81□□□□□ -0.84
CACNA1A-221ENST00000636012 ROMO1P60602 79 aa9.8□□□□□ -0.84
CACNA1A-221ENST00000636012 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
CACNA1A-221ENST00000636012 SEC61BP60468 96 aaKnown RBP9.79□□□□□ -0.84
CACNA1A-221ENST00000636012 NBEAL1Q6ZS30 2694 aa9.79□□□□□ -0.84
CACNA1A-221ENST00000636012 ADM2Q7Z4H4 148 aa9.77□□□□□ -0.85
CACNA1A-221ENST00000636012 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.85
CACNA1A-221ENST00000636012 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.85
CACNA1A-221ENST00000636012 CDH23Q9H251 3354 aa9.75□□□□□ -0.85
CACNA1A-221ENST00000636012 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
CACNA1A-221ENST00000636012 KRTAP16-1A8MUX0 517 aa9.73□□□□□ -0.85
CACNA1A-221ENST00000636012 Q75L30 129 aa9.73□□□□□ -0.85
CACNA1A-221ENST00000636012 WDFY4Q6ZS81 3184 aa9.72□□□□□ -0.85
CACNA1A-221ENST00000636012 LINC01558Q9Y6Z2 57 aa9.71□□□□□ -0.86
CACNA1A-221ENST00000636012 Q5W150 140 aa9.7□□□□□ -0.86
CACNA1A-221ENST00000636012 MMP24-AS1A0A0U1RRL7 71 aa9.69□□□□□ -0.86
CACNA1A-221ENST00000636012 UNC80Q8N2C7 3258 aa9.68□□□□□ -0.86
CACNA1A-221ENST00000636012 Q8NDZ9 215 aa9.67□□□□□ -0.86
CACNA1A-221ENST00000636012 RPL37P61927 97 aaKnown RBP9.66□□□□□ -0.86
CACNA1A-221ENST00000636012 UNC79Q9P2D8 2635 aa9.64□□□□□ -0.87
CACNA1A-221ENST00000636012 COL6A5A8TX70 2615 aa9.63□□□□□ -0.87
CACNA1A-221ENST00000636012 KRTAP10-1P60331 282 aa9.61□□□□□ -0.87
CACNA1A-221ENST00000636012 KRTAP10-2P60368 255 aa9.6□□□□□ -0.87
CACNA1A-221ENST00000636012 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
CACNA1A-221ENST00000636012 FRYQ5TBA9 3013 aa9.59□□□□□ -0.87
CACNA1A-221ENST00000636012 COL6A3P12111 3177 aa9.58□□□□□ -0.88
CACNA1A-221ENST00000636012 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
CACNA1A-221ENST00000636012 TEP1Q99973 2627 aaKnown RBP9.56□□□□□ -0.88
CACNA1A-221ENST00000636012 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
CACNA1A-221ENST00000636012 LCE6AA0A183 80 aa9.54□□□□□ -0.88
CACNA1A-221ENST00000636012 LINC00472Q9H8W2 130 aa9.54□□□□□ -0.88
CACNA1A-221ENST00000636012 SPRR1AP35321 89 aa9.53□□□□□ -0.88
CACNA1A-221ENST00000636012 Q5VV11 94 aa9.52□□□□□ -0.89
CACNA1A-221ENST00000636012 SPEGQ15772 3267 aa9.51□□□□□ -0.89
CACNA1A-221ENST00000636012 MAP1AP78559 2803 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-221ENST00000636012 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
CACNA1A-221ENST00000636012 CRYBG3Q68DQ2 2970 aa9.5□□□□□ -0.89
CACNA1A-221ENST00000636012 GCN1Q92616 2671 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-221ENST00000636012 ITPR2Q14571 2701 aa9.49□□□□□ -0.89
CACNA1A-221ENST00000636012 KMT2BQ9UMN6 2715 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-221ENST00000636012 OXTP01178 125 aa9.47□□□□□ -0.89
CACNA1A-221ENST00000636012 HTTP42858 3142 aa9.47□□□□□ -0.89
CACNA1A-221ENST00000636012 LAMA1P25391 3075 aa9.47□□□□□ -0.89
CACNA1A-221ENST00000636012 KALRNO60229 2985 aa9.45□□□□□ -0.9
CACNA1A-221ENST00000636012 KRTAP26-1Q6PEX3 210 aa9.45□□□□□ -0.9
CACNA1A-221ENST00000636012 NDUFAF8A1L188 74 aa9.44□□□□□ -0.9
CACNA1A-221ENST00000636012 SETXQ7Z333 2677 aaKnown RBP9.43□□□□□ -0.9
CACNA1A-221ENST00000636012 CFAP47Q6ZTR5 3102 aa9.43□□□□□ -0.9
CACNA1A-221ENST00000636012 STAB2Q8WWQ8 2551 aa9.42□□□□□ -0.9
CACNA1A-221ENST00000636012 VCANP13611 3396 aa9.42□□□□□ -0.9
CACNA1A-221ENST00000636012 CYSTM1Q9H1C7 97 aa9.41□□□□□ -0.9
CACNA1A-221ENST00000636012 SPRR1BP22528 89 aa9.39□□□□□ -0.91
CACNA1A-221ENST00000636012 NOTCH1P46531 2555 aa9.38□□□□□ -0.91
CACNA1A-221ENST00000636012 Q6ZR54 194 aa9.38□□□□□ -0.91
CACNA1A-221ENST00000636012 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
CACNA1A-221ENST00000636012 USP34Q70CQ2 3546 aa9.36□□□□□ -0.91
CACNA1A-221ENST00000636012 APCP25054 2843 aa9.35□□□□□ -0.91
CACNA1A-221ENST00000636012 Q5XG85 94 aa9.35□□□□□ -0.91
CACNA1A-221ENST00000636012 TRANK1O15050 2925 aa9.35□□□□□ -0.91
CACNA1A-221ENST00000636012 A0A087X002 238 aa9.34□□□□□ -0.91
CACNA1A-221ENST00000636012 LRBAP50851 2863 aa9.34□□□□□ -0.91
CACNA1A-221ENST00000636012 A8MU10 97 aa9.33□□□□□ -0.92
CACNA1A-221ENST00000636012 A8MUU9 505 aa9.32□□□□□ -0.92
CACNA1A-221ENST00000636012 PANO1I0J062 215 aa9.32□□□□□ -0.92
CACNA1A-221ENST00000636012 ASH1LQ9NR48 2969 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-221ENST00000636012 ZNF292O60281 2723 aa9.3□□□□□ -0.92
CACNA1A-221ENST00000636012 DSPP15924 2871 aaKnown RBP9.29□□□□□ -0.92
CACNA1A-221ENST00000636012 DMXL2Q8TDJ6 3036 aa9.27□□□□□ -0.93
CACNA1A-221ENST00000636012 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
CACNA1A-221ENST00000636012 P0C880 135 aa9.25□□□□□ -0.93
CACNA1A-221ENST00000636012 FRYLO94915 3013 aa9.23□□□□□ -0.93
CACNA1A-221ENST00000636012 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
CACNA1A-221ENST00000636012 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.94
CACNA1A-221ENST00000636012 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
CACNA1A-221ENST00000636012 TNP1P09430 55 aa9.13□□□□□ -0.95
CACNA1A-221ENST00000636012 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
CACNA1A-221ENST00000636012 COL12A1Q99715 3063 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms