RNA–Protein interactions for RNA: ENST00000622063.4

CHRDL2-210, Transcript of chordin like 2, humanhuman

TSL 5 BASIC

Gene CHRDL2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-210ENST00000622063 DEFB105AQ8NG35 78 aa12.53□□□□□ -0.4
CHRDL2-210ENST00000622063 A0A1B0GV72 72 aa12.52□□□□□ -0.4
CHRDL2-210ENST00000622063 ZNF861PO60384 105 aa12.52□□□□□ -0.4
CHRDL2-210ENST00000622063 SPINK6Q6UWN8 80 aa12.51□□□□□ -0.41
CHRDL2-210ENST00000622063 ABCA13Q86UQ4 5058 aa12.5□□□□□ -0.41
CHRDL2-210ENST00000622063 K7ERU9 68 aa12.5□□□□□ -0.41
CHRDL2-210ENST00000622063 GHRHP01286 108 aa12.5□□□□□ -0.41
CHRDL2-210ENST00000622063 C14orf132Q9NPU4 83 aa12.48□□□□□ -0.41
CHRDL2-210ENST00000622063 LAMTOR3Q9UHA4 124 aa12.48□□□□□ -0.41
CHRDL2-210ENST00000622063 NDUFV3P56181 108 aaKnown RBP12.48□□□□□ -0.41
CHRDL2-210ENST00000622063 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.41
CHRDL2-210ENST00000622063 C3orf22Q8N5N4 141 aa12.46□□□□□ -0.41
CHRDL2-210ENST00000622063 J3QR89 54 aa12.44□□□□□ -0.42
CHRDL2-210ENST00000622063 SMIM29Q86T20 159 aa12.43□□□□□ -0.42
CHRDL2-210ENST00000622063 RBM3P98179 157 aaKnown RBP12.42□□□□□ -0.42
CHRDL2-210ENST00000622063 MYCBP2O75592 4640 aa12.41□□□□□ -0.42
CHRDL2-210ENST00000622063 SPRR1BP22528 89 aa12.39□□□□□ -0.43
CHRDL2-210ENST00000622063 GAGE2AQ6NT46 116 aa12.38□□□□□ -0.43
CHRDL2-210ENST00000622063 FAT3Q8TDW7 4589 aa12.37□□□□□ -0.43
CHRDL2-210ENST00000622063 FLG2Q5D862 2391 aaPredicted RBP12.37□□□□□ -0.43
CHRDL2-210ENST00000622063 LOC110117498A0A087WWA1 95 aa12.37□□□□□ -0.43
CHRDL2-210ENST00000622063 TRBV7-4A0A0J9YYF1 115 aa12.37□□□□□ -0.43
CHRDL2-210ENST00000622063 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
CHRDL2-210ENST00000622063 LRP1Q07954 4544 aaKnown RBP12.36□□□□□ -0.43
CHRDL2-210ENST00000622063 Q6ZQT0 140 aa12.36□□□□□ -0.43
CHRDL2-210ENST00000622063 CCKP06307 115 aa12.34□□□□□ -0.43
CHRDL2-210ENST00000622063 DSCR8Q96T75 97 aa12.34□□□□□ -0.43
CHRDL2-210ENST00000622063 PCLOQ9Y6V0 5065 aa12.34□□□□□ -0.43
CHRDL2-210ENST00000622063 FAM240AA0A1B0GVK7 77 aa12.32□□□□□ -0.44
CHRDL2-210ENST00000622063 LINC00483Q53H64 154 aa12.32□□□□□ -0.44
CHRDL2-210ENST00000622063 CDIP1Q9H305 208 aa12.31□□□□□ -0.44
CHRDL2-210ENST00000622063 ZNF706Q9Y5V0 76 aaPredicted RBP12.29□□□□□ -0.44
CHRDL2-210ENST00000622063 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
CHRDL2-210ENST00000622063 PDE6GP18545 87 aa12.29□□□□□ -0.44
CHRDL2-210ENST00000622063 IGLV8-61A0A075B6I0 122 aa12.28□□□□□ -0.44
CHRDL2-210ENST00000622063 OXTP01178 125 aa12.28□□□□□ -0.44
CHRDL2-210ENST00000622063 F8WEM9 126 aa12.26□□□□□ -0.45
CHRDL2-210ENST00000622063 ACYP1P07311 99 aa12.26□□□□□ -0.45
CHRDL2-210ENST00000622063 ANAPC11Q9NYG5 84 aa12.26□□□□□ -0.45
CHRDL2-210ENST00000622063 VPS25Q9BRG1 176 aa12.25□□□□□ -0.45
CHRDL2-210ENST00000622063 A0A0G2JQZ4 141 aa12.24□□□□□ -0.45
CHRDL2-210ENST00000622063 KRTAP29-1A8MX34 341 aaPredicted RBP12.24□□□□□ -0.45
CHRDL2-210ENST00000622063 IGFL1Q6UW32 110 aa12.22□□□□□ -0.45
CHRDL2-210ENST00000622063 LINC00846Q9NV44 126 aa12.22□□□□□ -0.45
CHRDL2-210ENST00000622063 A0A1W2PNM2 257 aa12.22□□□□□ -0.45
CHRDL2-210ENST00000622063 TNXBP22105 4242 aa12.21□□□□□ -0.45
CHRDL2-210ENST00000622063 FAM229BQ4G0N7 80 aa12.2□□□□□ -0.46
CHRDL2-210ENST00000622063 PRR26Q8N8Z3 221 aa12.2□□□□□ -0.46
CHRDL2-210ENST00000622063 CRYGAP11844 174 aa12.19□□□□□ -0.46
CHRDL2-210ENST00000622063 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
CHRDL2-210ENST00000622063 A0A087X002 238 aa12.18□□□□□ -0.46
CHRDL2-210ENST00000622063 J3QL48 77 aa12.18□□□□□ -0.46
CHRDL2-210ENST00000622063 Q8NBF4 154 aa12.17□□□□□ -0.46
CHRDL2-210ENST00000622063 C21orf62-AS1Q17RA5 79 aa12.16□□□□□ -0.46
CHRDL2-210ENST00000622063 Q6JHZ5 121 aa12.16□□□□□ -0.46
CHRDL2-210ENST00000622063 KRTAP10-8P60410 259 aa12.15□□□□□ -0.46
CHRDL2-210ENST00000622063 C9orf153Q5TBE3 101 aa12.14□□□□□ -0.47
CHRDL2-210ENST00000622063 MT1HL1P0DM35 61 aa12.13□□□□□ -0.47
CHRDL2-210ENST00000622063 MOBPQ13875 183 aa12.13□□□□□ -0.47
CHRDL2-210ENST00000622063 KRTAP13-2Q52LG2 175 aa12.12□□□□□ -0.47
CHRDL2-210ENST00000622063 TYMSOSQ8TAI1 123 aa12.11□□□□□ -0.47
CHRDL2-210ENST00000622063 MT-ATP8P03928 68 aa12.1□□□□□ -0.47
CHRDL2-210ENST00000622063 LINC00643Q86TS7 51 aa12.07□□□□□ -0.48
CHRDL2-210ENST00000622063 A0A1B0GW54 56 aa12.06□□□□□ -0.48
CHRDL2-210ENST00000622063 Q6Q795 121 aa12.06□□□□□ -0.48
CHRDL2-210ENST00000622063 Q6ZVQ6 151 aa12.06□□□□□ -0.48
CHRDL2-210ENST00000622063 UBL5Q9BZL1 73 aa12.06□□□□□ -0.48
CHRDL2-210ENST00000622063 DMBT1Q9UGM3 2413 aaPredicted RBP12.05□□□□□ -0.48
CHRDL2-210ENST00000622063 SIGMAR1Q99720 223 aa12.05□□□□□ -0.48
CHRDL2-210ENST00000622063 A0A087WSZ3 146 aa12□□□□□ -0.49
CHRDL2-210ENST00000622063 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
CHRDL2-210ENST00000622063 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
CHRDL2-210ENST00000622063 IGKV3D-7A0A0C4DH55 119 aa11.98□□□□□ -0.49
CHRDL2-210ENST00000622063 HRCT1Q6UXD1 115 aa11.98□□□□□ -0.49
CHRDL2-210ENST00000622063 NREPQ16612 68 aa11.97□□□□□ -0.49
CHRDL2-210ENST00000622063 LINC00304Q8N9R0 145 aa11.96□□□□□ -0.5
CHRDL2-210ENST00000622063 HERC1Q15751 4861 aa11.95□□□□□ -0.5
CHRDL2-210ENST00000622063 C4orf48Q5BLP8 95 aa11.93□□□□□ -0.5
CHRDL2-210ENST00000622063 ATP5EP2Q5VTU8 51 aa11.93□□□□□ -0.5
CHRDL2-210ENST00000622063 SPAG11AQ6PDA7 123 aa11.91□□□□□ -0.5
CHRDL2-210ENST00000622063 CD164Q04900 197 aa11.9□□□□□ -0.5
CHRDL2-210ENST00000622063 CXCL6P80162 114 aa11.88□□□□□ -0.51
CHRDL2-210ENST00000622063 IMUPQ9GZP8 106 aa11.86□□□□□ -0.51
CHRDL2-210ENST00000622063 BPY2O14599 106 aa11.85□□□□□ -0.51
CHRDL2-210ENST00000622063 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
CHRDL2-210ENST00000622063 SPINK1P00995 79 aa11.84□□□□□ -0.51
CHRDL2-210ENST00000622063 DEFB116Q30KQ4 102 aa11.84□□□□□ -0.51
CHRDL2-210ENST00000622063 Q96NJ1 140 aa11.84□□□□□ -0.51
CHRDL2-210ENST00000622063 DSCR10P59022 87 aa11.81□□□□□ -0.52
CHRDL2-210ENST00000622063 SS18L2Q9UHA2 77 aa11.81□□□□□ -0.52
CHRDL2-210ENST00000622063 Q8N9L7 120 aa11.81□□□□□ -0.52
CHRDL2-210ENST00000622063 A0A087WVE0 104 aa11.8□□□□□ -0.52
CHRDL2-210ENST00000622063 HIST1H4AP62805 103 aaKnown RBP11.8□□□□□ -0.52
CHRDL2-210ENST00000622063 IGKV4-1P06312 121 aa11.77□□□□□ -0.53
CHRDL2-210ENST00000622063 RPS29P62273 56 aaKnown RBP11.76□□□□□ -0.53
CHRDL2-210ENST00000622063 SCGB1A1P11684 91 aa11.74□□□□□ -0.53
CHRDL2-210ENST00000622063 ASB16-AS1Q495Z4 193 aa11.74□□□□□ -0.53
CHRDL2-210ENST00000622063 Q5XG85 94 aa11.74□□□□□ -0.53
CHRDL2-210ENST00000622063 K7EQZ3 153 aa11.73□□□□□ -0.53
CHRDL2-210ENST00000622063 LIMD2Q9BT23 127 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms