RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SPRR1BP22528 89 aa13.11□□□□□ -0.31
SPAST-204ENST00000621856 ZNF861PO60384 105 aa13.1□□□□□ -0.31
SPAST-204ENST00000621856 IGLV7-43P04211 117 aa13.08□□□□□ -0.32
SPAST-204ENST00000621856 UBL5Q9BZL1 73 aa13.08□□□□□ -0.32
SPAST-204ENST00000621856 ZNF706Q9Y5V0 76 aaPredicted RBP13.07□□□□□ -0.32
SPAST-204ENST00000621856 A0A1B0GVY2 172 aa13.06□□□□□ -0.32
SPAST-204ENST00000621856 SPRR4Q96PI1 79 aa13.06□□□□□ -0.32
SPAST-204ENST00000621856 IGLV8-61A0A075B6I0 122 aa13.02□□□□□ -0.32
SPAST-204ENST00000621856 Q6JHZ5 121 aa13.02□□□□□ -0.32
SPAST-204ENST00000621856 A0A1W2PNM2 257 aa13.02□□□□□ -0.33
SPAST-204ENST00000621856 Q8NBF4 154 aa13.01□□□□□ -0.33
SPAST-204ENST00000621856 IGFL1Q6UW32 110 aa13□□□□□ -0.33
SPAST-204ENST00000621856 RYR2Q92736 4967 aa13□□□□□ -0.33
SPAST-204ENST00000621856 SRRM2Q9UQ35 2752 aaKnown RBP13□□□□□ -0.33
SPAST-204ENST00000621856 IGKV3D-7A0A0C4DH55 119 aa12.99□□□□□ -0.33
SPAST-204ENST00000621856 Q6ZVQ6 151 aa12.99□□□□□ -0.33
SPAST-204ENST00000621856 TRBV7-7A0A0K0K1E9 115 aa12.99□□□□□ -0.33
SPAST-204ENST00000621856 LINC00483Q53H64 154 aa12.99□□□□□ -0.33
SPAST-204ENST00000621856 SCGB1A1P11684 91 aa12.98□□□□□ -0.33
SPAST-204ENST00000621856 A0A0G2JQZ4 141 aa12.97□□□□□ -0.33
SPAST-204ENST00000621856 Q6Q795 121 aa12.96□□□□□ -0.33
SPAST-204ENST00000621856 A0A1B0GW54 56 aa12.95□□□□□ -0.34
SPAST-204ENST00000621856 ATP5EP2Q5VTU8 51 aa12.95□□□□□ -0.34
SPAST-204ENST00000621856 IGLV9-49A0A0B4J1Y8 123 aa12.94□□□□□ -0.34
SPAST-204ENST00000621856 IMUPQ9GZP8 106 aa12.94□□□□□ -0.34
SPAST-204ENST00000621856 C9orf153Q5TBE3 101 aa12.93□□□□□ -0.34
SPAST-204ENST00000621856 CRYGAP11844 174 aa12.91□□□□□ -0.34
SPAST-204ENST00000621856 NREPQ16612 68 aa12.91□□□□□ -0.34
SPAST-204ENST00000621856 KMT2CQ8NEZ4 4911 aaKnown RBP12.91□□□□□ -0.34
SPAST-204ENST00000621856 ANAPC11Q9NYG5 84 aa12.91□□□□□ -0.34
SPAST-204ENST00000621856 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
SPAST-204ENST00000621856 PCP4P48539 62 aa12.87□□□□□ -0.35
SPAST-204ENST00000621856 LRP1BQ9NZR2 4599 aa12.86□□□□□ -0.35
SPAST-204ENST00000621856 HIST1H4AP62805 103 aaKnown RBP12.85□□□□□ -0.35
SPAST-204ENST00000621856 MOBPQ13875 183 aa12.85□□□□□ -0.35
SPAST-204ENST00000621856 DYNC1H1Q14204 4646 aaKnown RBP12.84□□□□□ -0.35
SPAST-204ENST00000621856 CXCL6P80162 114 aa12.84□□□□□ -0.35
SPAST-204ENST00000621856 RPL37AP61513 92 aaKnown RBP12.83□□□□□ -0.36
SPAST-204ENST00000621856 A0A087WSZ3 146 aa12.82□□□□□ -0.36
SPAST-204ENST00000621856 BPY2O14599 106 aa12.79□□□□□ -0.36
SPAST-204ENST00000621856 SMR3BP02814 79 aaPredicted RBP12.79□□□□□ -0.36
SPAST-204ENST00000621856 A0A087WVE0 104 aa12.78□□□□□ -0.36
SPAST-204ENST00000621856 FAM236AA0A1B0GUQ0 79 aa12.78□□□□□ -0.36
SPAST-204ENST00000621856 FAM236BA0A1B0GV22 79 aa12.78□□□□□ -0.36
SPAST-204ENST00000621856 HRCT1Q6UXD1 115 aa12.74□□□□□ -0.37
SPAST-204ENST00000621856 FAM229BQ4G0N7 80 aa12.71□□□□□ -0.38
SPAST-204ENST00000621856 SPINK6Q6UWN8 80 aa12.69□□□□□ -0.38
SPAST-204ENST00000621856 ANAPC13Q9BS18 74 aa12.69□□□□□ -0.38
SPAST-204ENST00000621856 SSBP3-AS1Q7Z2R9 100 aa12.68□□□□□ -0.38
SPAST-204ENST00000621856 Q8N9L7 120 aa12.68□□□□□ -0.38
SPAST-204ENST00000621856 APOBP04114 4563 aaKnown RBP12.68□□□□□ -0.38
SPAST-204ENST00000621856 VPS13BQ7Z7G8 4022 aa12.68□□□□□ -0.38
SPAST-204ENST00000621856 A0A087X002 238 aa12.68□□□□□ -0.38
SPAST-204ENST00000621856 KRTAP1-4P0C5Y4 121 aa12.67□□□□□ -0.38
SPAST-204ENST00000621856 DEFB116Q30KQ4 102 aa12.66□□□□□ -0.38
SPAST-204ENST00000621856 IGKV4-1P06312 121 aa12.65□□□□□ -0.38
SPAST-204ENST00000621856 KRTAP13-2Q52LG2 175 aa12.64□□□□□ -0.39
SPAST-204ENST00000621856 SS18L2Q9UHA2 77 aa12.63□□□□□ -0.39
SPAST-204ENST00000621856 RYR3Q15413 4870 aa12.63□□□□□ -0.39
SPAST-204ENST00000621856 PLA2G1BP04054 148 aaKnown RBP12.62□□□□□ -0.39
SPAST-204ENST00000621856 DSCR10P59022 87 aa12.62□□□□□ -0.39
SPAST-204ENST00000621856 ATOX1O00244 68 aa12.61□□□□□ -0.39
SPAST-204ENST00000621856 LINC00472Q9H8W2 130 aa12.6□□□□□ -0.39
SPAST-204ENST00000621856 CD164Q04900 197 aa12.59□□□□□ -0.39
SPAST-204ENST00000621856 KRTAP10-4P60372 401 aaPredicted RBP12.59□□□□□ -0.39
SPAST-204ENST00000621856 K7EQZ3 153 aa12.57□□□□□ -0.4
SPAST-204ENST00000621856 J3KT08 172 aa12.54□□□□□ -0.4
SPAST-204ENST00000621856 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
SPAST-204ENST00000621856 TYMSOSQ8TAI1 123 aa12.54□□□□□ -0.4
SPAST-204ENST00000621856 CDK2AP2O75956 126 aa12.53□□□□□ -0.4
SPAST-204ENST00000621856 Q96NJ1 140 aa12.52□□□□□ -0.41
SPAST-204ENST00000621856 A8MWP4 228 aa12.5□□□□□ -0.41
SPAST-204ENST00000621856 FAT1Q14517 4588 aa12.5□□□□□ -0.41
SPAST-204ENST00000621856 PRR26Q8N8Z3 221 aa12.48□□□□□ -0.41
SPAST-204ENST00000621856 NDUFB1O75438 58 aa12.45□□□□□ -0.42
SPAST-204ENST00000621856 C4orf48Q5BLP8 95 aa12.45□□□□□ -0.42
SPAST-204ENST00000621856 PRR15Q8IV56 129 aa12.45□□□□□ -0.42
SPAST-204ENST00000621856 HCG22E2RYF7 251 aa12.43□□□□□ -0.42
SPAST-204ENST00000621856 Q5VSD8 79 aa12.43□□□□□ -0.42
SPAST-204ENST00000621856 SERP2Q8N6R1 65 aa12.43□□□□□ -0.42
SPAST-204ENST00000621856 CCDC179H3BU77 68 aa12.41□□□□□ -0.42
SPAST-204ENST00000621856 COX7CP15954 63 aa12.41□□□□□ -0.42
SPAST-204ENST00000621856 ASB16-AS1Q495Z4 193 aa12.41□□□□□ -0.42
SPAST-204ENST00000621856 SMIM20Q8N5G0 67 aa12.41□□□□□ -0.42
SPAST-204ENST00000621856 LIMD2Q9BT23 127 aa12.4□□□□□ -0.42
SPAST-204ENST00000621856 WFDC13Q8IUB5 93 aa12.39□□□□□ -0.43
SPAST-204ENST00000621856 TRAV7A0A075B6U4 112 aa12.38□□□□□ -0.43
SPAST-204ENST00000621856 Q5XG85 94 aa12.38□□□□□ -0.43
SPAST-204ENST00000621856 UQCRQO14949 82 aa12.37□□□□□ -0.43
SPAST-204ENST00000621856 LINC00304Q8N9R0 145 aa12.37□□□□□ -0.43
SPAST-204ENST00000621856 SPINK1P00995 79 aa12.36□□□□□ -0.43
SPAST-204ENST00000621856 HSPG2P98160 4391 aa12.35□□□□□ -0.43
SPAST-204ENST00000621856 A0A1B0GVX0 72 aa12.34□□□□□ -0.43
SPAST-204ENST00000621856 CASC2Q6XLA1 102 aa12.34□□□□□ -0.43
SPAST-204ENST00000621856 IGHV6-1A0A0B4J1U7 121 aa12.33□□□□□ -0.44
SPAST-204ENST00000621856 SPAG11AQ6PDA7 123 aa12.33□□□□□ -0.44
SPAST-204ENST00000621856 PKHD1L1Q86WI1 4243 aa12.32□□□□□ -0.44
SPAST-204ENST00000621856 MMP24-AS1A0A0U1RRL7 71 aa12.31□□□□□ -0.44
SPAST-204ENST00000621856 C1orf195Q5TG92 126 aa12.31□□□□□ -0.44
SPAST-204ENST00000621856 KRTAP29-1A8MX34 341 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms