RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 MMP24-AS1A0A0U1RRL7 71 aa2.53□□□□□ -2.01
CHL1-216ENST00000620033 Q5VV11 94 aa2.52□□□□□ -2.01
CHL1-216ENST00000620033 TRANK1O15050 2925 aa2.52□□□□□ -2.01
CHL1-216ENST00000620033 XP32Q5T750 250 aa2.52□□□□□ -2.01
CHL1-216ENST00000620033 KTN1-AS1Q86SY8 53 aa2.52□□□□□ -2.01
CHL1-216ENST00000620033 SMCPP49901 116 aaPredicted RBP2.52□□□□□ -2.01
CHL1-216ENST00000620033 SPANXA2-OT1Q8N9U9 137 aa2.52□□□□□ -2.01
CHL1-216ENST00000620033 SPRR1AP35321 89 aa2.51□□□□□ -2.01
CHL1-216ENST00000620033 KRTAP17-1Q9BYP8 105 aa2.51□□□□□ -2.01
CHL1-216ENST00000620033 HELZ2Q9BYK8 2649 aaKnown RBP2.51□□□□□ -2.01
CHL1-216ENST00000620033 ACANP16112 2415 aa2.51□□□□□ -2.01
CHL1-216ENST00000620033 ASB16-AS1Q495Z4 193 aa2.5□□□□□ -2.01
CHL1-216ENST00000620033 DNAH12Q6ZR08 3092 aa2.5□□□□□ -2.01
CHL1-216ENST00000620033 KRTAP26-1Q6PEX3 210 aa2.5□□□□□ -2.01
CHL1-216ENST00000620033 KRTAP13-2Q52LG2 175 aa2.49□□□□□ -2.01
CHL1-216ENST00000620033 ROMO1P60602 79 aa2.49□□□□□ -2.01
CHL1-216ENST00000620033 HTTP42858 3142 aa2.47□□□□□ -2.01
CHL1-216ENST00000620033 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
CHL1-216ENST00000620033 A6NN06 94 aa2.47□□□□□ -2.01
CHL1-216ENST00000620033 LINC00472Q9H8W2 130 aa2.47□□□□□ -2.01
CHL1-216ENST00000620033 UTRNP46939 3433 aa2.46□□□□□ -2.02
CHL1-216ENST00000620033 WDR87Q6ZQQ6 2873 aa2.46□□□□□ -2.02
CHL1-216ENST00000620033 CEP350Q5VT06 3117 aa2.46□□□□□ -2.02
CHL1-216ENST00000620033 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
CHL1-216ENST00000620033 CHD7Q9P2D1 2997 aa2.46□□□□□ -2.02
CHL1-216ENST00000620033 CENPFP49454 3210 aa2.45□□□□□ -2.02
CHL1-216ENST00000620033 TLN2Q9Y4G6 2542 aa2.45□□□□□ -2.02
CHL1-216ENST00000620033 EIF4EBP3O60516 100 aaPredicted RBP2.45□□□□□ -2.02
CHL1-216ENST00000620033 KRTAP4-16G5E9R7 235 aaPredicted RBP2.45□□□□□ -2.02
CHL1-216ENST00000620033 KRTAP11-1Q8IUC1 163 aa2.41□□□□□ -2.02
CHL1-216ENST00000620033 CEP295Q9C0D2 2601 aa2.41□□□□□ -2.02
CHL1-216ENST00000620033 Q5XG85 94 aa2.41□□□□□ -2.02
CHL1-216ENST00000620033 ITPR3Q14573 2671 aa2.41□□□□□ -2.02
CHL1-216ENST00000620033 FLNBO75369 2602 aaKnown RBP2.41□□□□□ -2.02
CHL1-216ENST00000620033 KRTAP13-3Q3SY46 172 aa2.41□□□□□ -2.02
CHL1-216ENST00000620033 C10orf95Q9H7T3 257 aa2.41□□□□□ -2.02
CHL1-216ENST00000620033 KMT2BQ9UMN6 2715 aaPredicted RBP2.4□□□□□ -2.02
CHL1-216ENST00000620033 EPG5Q9HCE0 2579 aa2.4□□□□□ -2.02
CHL1-216ENST00000620033 PCNTO95613 3336 aa2.39□□□□□ -2.03
CHL1-216ENST00000620033 FLNAP21333 2647 aaKnown RBP2.38□□□□□ -2.03
CHL1-216ENST00000620033 NOTCH2NLQ7Z3S9 236 aa2.37□□□□□ -2.03
CHL1-216ENST00000620033 MGAM2Q2M2H8 2515 aa2.37□□□□□ -2.03
CHL1-216ENST00000620033 LORP23490 312 aaPredicted RBP2.37□□□□□ -2.03
CHL1-216ENST00000620033 SETD2Q9BYW2 2564 aaPredicted RBP2.36□□□□□ -2.03
CHL1-216ENST00000620033 CFAP46Q8IYW2 2715 aa2.36□□□□□ -2.03
CHL1-216ENST00000620033 ZNF292O60281 2723 aa2.36□□□□□ -2.03
CHL1-216ENST00000620033 OCR1Q9BZK8 76 aa2.34□□□□□ -2.03
CHL1-216ENST00000620033 C5orf42Q9H799 3197 aa2.34□□□□□ -2.03
CHL1-216ENST00000620033 KRTAP1-4P0C5Y4 121 aa2.34□□□□□ -2.03
CHL1-216ENST00000620033 PRO0628Q9UI54 55 aa2.34□□□□□ -2.03
CHL1-216ENST00000620033 KRTAP13-1Q8IUC0 172 aa2.33□□□□□ -2.04
CHL1-216ENST00000620033 CRCT1Q9UGL9 99 aa2.33□□□□□ -2.04
CHL1-216ENST00000620033 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
CHL1-216ENST00000620033 USP24Q9UPU5 2620 aa2.33□□□□□ -2.04
CHL1-216ENST00000620033 USP9YO00507 2555 aaPredicted RBP2.33□□□□□ -2.04
CHL1-216ENST00000620033 A0A0C4DFX4 3053 aa2.32□□□□□ -2.04
CHL1-216ENST00000620033 ALMS1Q8TCU4 4167 aa2.32□□□□□ -2.04
CHL1-216ENST00000620033 H0YAA0 97 aa2.32□□□□□ -2.04
CHL1-216ENST00000620033 MAST4O15021 2626 aa2.32□□□□□ -2.04
CHL1-216ENST00000620033 RANBP2P49792 3224 aaKnown RBP2.31□□□□□ -2.04
CHL1-216ENST00000620033 A8MU10 97 aa2.3□□□□□ -2.04
CHL1-216ENST00000620033 BRCA2P51587 3418 aa2.3□□□□□ -2.04
CHL1-216ENST00000620033 PRRC2CQ9Y520 2896 aaKnown RBP2.3□□□□□ -2.04
CHL1-216ENST00000620033 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
CHL1-216ENST00000620033 MKI67P46013 3256 aaKnown RBP2.28□□□□□ -2.04
CHL1-216ENST00000620033 RYR1P21817 5038 aa2.28□□□□□ -2.04
CHL1-216ENST00000620033 KRTAP7-1Q8IUC3 87 aa2.27□□□□□ -2.05
CHL1-216ENST00000620033 ITPR2Q14571 2701 aa2.26□□□□□ -2.05
CHL1-216ENST00000620033 LAMA3Q16787 3333 aa2.26□□□□□ -2.05
CHL1-216ENST00000620033 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
CHL1-216ENST00000620033 FLG2Q5D862 2391 aaPredicted RBP2.25□□□□□ -2.05
CHL1-216ENST00000620033 ATRQ13535 2644 aa2.25□□□□□ -2.05
CHL1-216ENST00000620033 SETXQ7Z333 2677 aaKnown RBP2.25□□□□□ -2.05
CHL1-216ENST00000620033 CYSTM1Q9H1C7 97 aa2.25□□□□□ -2.05
CHL1-216ENST00000620033 UNC80Q8N2C7 3258 aa2.24□□□□□ -2.05
CHL1-216ENST00000620033 GCN1Q92616 2671 aaKnown RBP2.24□□□□□ -2.05
CHL1-216ENST00000620033 CRYBG3Q68DQ2 2970 aa2.23□□□□□ -2.05
CHL1-216ENST00000620033 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
CHL1-216ENST00000620033 UNC79Q9P2D8 2635 aa2.23□□□□□ -2.05
CHL1-216ENST00000620033 TEX15Q9BXT5 2789 aa2.23□□□□□ -2.05
CHL1-216ENST00000620033 CDH23Q9H251 3354 aa2.22□□□□□ -2.05
CHL1-216ENST00000620033 KRTAP8-1Q8IUC2 63 aa2.22□□□□□ -2.05
CHL1-216ENST00000620033 NBEAQ8NFP9 2946 aa2.21□□□□□ -2.06
CHL1-216ENST00000620033 AKAP13Q12802 2813 aa2.21□□□□□ -2.06
CHL1-216ENST00000620033 TEP1Q99973 2627 aaKnown RBP2.21□□□□□ -2.06
CHL1-216ENST00000620033 XIRP2A4UGR9 3374 aa2.21□□□□□ -2.06
CHL1-216ENST00000620033 LAMA2P24043 3122 aaKnown RBP2.21□□□□□ -2.06
CHL1-216ENST00000620033 KRTAP15-1Q3LI76 137 aa2.21□□□□□ -2.06
CHL1-216ENST00000620033 STAB1Q9NY15 2570 aa2.2□□□□□ -2.06
CHL1-216ENST00000620033 KRTAP16-1A8MUX0 517 aa2.2□□□□□ -2.06
CHL1-216ENST00000620033 PRAC1Q96KF2 57 aa2.2□□□□□ -2.06
CHL1-216ENST00000620033 SZT2Q5T011 3432 aa2.2□□□□□ -2.06
CHL1-216ENST00000620033 TRIOO75962 3097 aa2.19□□□□□ -2.06
CHL1-216ENST00000620033 FLNCQ14315 2725 aa2.19□□□□□ -2.06
CHL1-216ENST00000620033 MGAQ8IWI9 3026 aa2.19□□□□□ -2.06
CHL1-216ENST00000620033 NBPF19A0A087WUL8 3843 aa2.19□□□□□ -2.06
CHL1-216ENST00000620033 KRTAP10-6P60371 365 aaPredicted RBP2.19□□□□□ -2.06
CHL1-216ENST00000620033 DSPP15924 2871 aaKnown RBP2.18□□□□□ -2.06
CHL1-216ENST00000620033 CFAP54Q96N23 3096 aa2.17□□□□□ -2.06
CHL1-216ENST00000620033 SPTBN5Q9NRC6 3674 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms