RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 SMIM29Q86T20 159 aa14.11□□□□□ -0.15
CCND3-223ENST00000616010 KIAA1109Q2LD37 5005 aa14.1□□□□□ -0.15
CCND3-223ENST00000616010 FAM229AH3BQW9 127 aa14.09□□□□□ -0.15
CCND3-223ENST00000616010 LINC00483Q53H64 154 aa14.09□□□□□ -0.15
CCND3-223ENST00000616010 JMJD7-PLA2G4BH0Y9G9 81 aa14.08□□□□□ -0.15
CCND3-223ENST00000616010 OBSCN-AS1Q96MR7 158 aa14.08□□□□□ -0.15
CCND3-223ENST00000616010 C14orf132Q9NPU4 83 aa14.07□□□□□ -0.16
CCND3-223ENST00000616010 ANAPC11Q9NYG5 84 aa14.07□□□□□ -0.16
CCND3-223ENST00000616010 PLA2G1BP04054 148 aaKnown RBP14.07□□□□□ -0.16
CCND3-223ENST00000616010 Q5VSD8 79 aa14.06□□□□□ -0.16
CCND3-223ENST00000616010 SPINK6Q6UWN8 80 aa14.06□□□□□ -0.16
CCND3-223ENST00000616010 RBM3P98179 157 aaKnown RBP14.05□□□□□ -0.16
CCND3-223ENST00000616010 F8WEM9 126 aa14.05□□□□□ -0.16
CCND3-223ENST00000616010 DSCR8Q96T75 97 aa14□□□□□ -0.17
CCND3-223ENST00000616010 IGLV9-49A0A0B4J1Y8 123 aa13.99□□□□□ -0.17
CCND3-223ENST00000616010 KRTAP17-1Q9BYP8 105 aa13.98□□□□□ -0.17
CCND3-223ENST00000616010 KRTAP1-4P0C5Y4 121 aa13.97□□□□□ -0.17
CCND3-223ENST00000616010 TRBV7-4A0A0J9YYF1 115 aa13.97□□□□□ -0.17
CCND3-223ENST00000616010 C9orf153Q5TBE3 101 aa13.96□□□□□ -0.17
CCND3-223ENST00000616010 Q8N1X5 172 aa13.95□□□□□ -0.18
CCND3-223ENST00000616010 IGLV8-61A0A075B6I0 122 aa13.94□□□□□ -0.18
CCND3-223ENST00000616010 LOC110117498A0A087WWA1 95 aa13.94□□□□□ -0.18
CCND3-223ENST00000616010 Q6ZQT0 140 aa13.93□□□□□ -0.18
CCND3-223ENST00000616010 PKHD1L1Q86WI1 4243 aa13.93□□□□□ -0.18
CCND3-223ENST00000616010 A0A087X002 238 aa13.92□□□□□ -0.18
CCND3-223ENST00000616010 MOBPQ13875 183 aa13.92□□□□□ -0.18
CCND3-223ENST00000616010 A0A0G2JQZ4 141 aa13.91□□□□□ -0.18
CCND3-223ENST00000616010 FAM229BQ4G0N7 80 aa13.91□□□□□ -0.18
CCND3-223ENST00000616010 IGFL1Q6UW32 110 aa13.9□□□□□ -0.18
CCND3-223ENST00000616010 PDE6GP18545 87 aa13.89□□□□□ -0.19
CCND3-223ENST00000616010 Q8NBF4 154 aa13.89□□□□□ -0.19
CCND3-223ENST00000616010 VPS25Q9BRG1 176 aa13.89□□□□□ -0.19
CCND3-223ENST00000616010 J3QR89 54 aa13.88□□□□□ -0.19
CCND3-223ENST00000616010 CCKP06307 115 aa13.88□□□□□ -0.19
CCND3-223ENST00000616010 Q6JHZ5 121 aa13.87□□□□□ -0.19
CCND3-223ENST00000616010 BIRC6Q9NR09 4857 aa13.87□□□□□ -0.19
CCND3-223ENST00000616010 CRYGAP11844 174 aa13.86□□□□□ -0.19
CCND3-223ENST00000616010 K7ERU9 68 aa13.86□□□□□ -0.19
CCND3-223ENST00000616010 KRTAP13-2Q52LG2 175 aa13.85□□□□□ -0.19
CCND3-223ENST00000616010 A0A1W2PNM2 257 aa13.82□□□□□ -0.2
CCND3-223ENST00000616010 PRR26Q8N8Z3 221 aa13.79□□□□□ -0.2
CCND3-223ENST00000616010 C21orf62-AS1Q17RA5 79 aa13.78□□□□□ -0.2
CCND3-223ENST00000616010 FAM240AA0A1B0GVK7 77 aa13.77□□□□□ -0.21
CCND3-223ENST00000616010 SSBP3-AS1Q7Z2R9 100 aa13.76□□□□□ -0.21
CCND3-223ENST00000616010 TYMSOSQ8TAI1 123 aa13.75□□□□□ -0.21
CCND3-223ENST00000616010 HRCT1Q6UXD1 115 aa13.73□□□□□ -0.21
CCND3-223ENST00000616010 ACYP1P07311 99 aa13.73□□□□□ -0.21
CCND3-223ENST00000616010 Q6Q795 121 aa13.71□□□□□ -0.21
CCND3-223ENST00000616010 LINC00846Q9NV44 126 aa13.71□□□□□ -0.21
CCND3-223ENST00000616010 KRTAP4-5Q9BYR2 181 aa13.7□□□□□ -0.22
CCND3-223ENST00000616010 A0A087WSZ3 146 aa13.68□□□□□ -0.22
CCND3-223ENST00000616010 TRBV7-7A0A0K0K1E9 115 aa13.66□□□□□ -0.22
CCND3-223ENST00000616010 A0A1B0GW54 56 aa13.66□□□□□ -0.22
CCND3-223ENST00000616010 LRP1Q07954 4544 aaKnown RBP13.66□□□□□ -0.22
CCND3-223ENST00000616010 FLG2Q5D862 2391 aaPredicted RBP13.66□□□□□ -0.22
CCND3-223ENST00000616010 HERC2O95714 4834 aa13.64□□□□□ -0.23
CCND3-223ENST00000616010 CD164Q04900 197 aa13.63□□□□□ -0.23
CCND3-223ENST00000616010 CDIP1Q9H305 208 aa13.62□□□□□ -0.23
CCND3-223ENST00000616010 FAT3Q8TDW7 4589 aa13.61□□□□□ -0.23
CCND3-223ENST00000616010 UBL5Q9BZL1 73 aa13.61□□□□□ -0.23
CCND3-223ENST00000616010 MYCBP2O75592 4640 aa13.59□□□□□ -0.23
CCND3-223ENST00000616010 Q6ZVQ6 151 aa13.59□□□□□ -0.23
CCND3-223ENST00000616010 LINC00304Q8N9R0 145 aa13.59□□□□□ -0.23
CCND3-223ENST00000616010 C4orf48Q5BLP8 95 aa13.57□□□□□ -0.24
CCND3-223ENST00000616010 TNXBP22105 4242 aa13.57□□□□□ -0.24
CCND3-223ENST00000616010 NREPQ16612 68 aa13.56□□□□□ -0.24
CCND3-223ENST00000616010 SS18L2Q9UHA2 77 aa13.54□□□□□ -0.24
CCND3-223ENST00000616010 KRTAP10-8P60410 259 aa13.52□□□□□ -0.24
CCND3-223ENST00000616010 SPINK1P00995 79 aa13.51□□□□□ -0.25
CCND3-223ENST00000616010 ABCA13Q86UQ4 5058 aa13.5□□□□□ -0.25
CCND3-223ENST00000616010 SPAG11AQ6PDA7 123 aa13.5□□□□□ -0.25
CCND3-223ENST00000616010 LINC00643Q86TS7 51 aa13.49□□□□□ -0.25
CCND3-223ENST00000616010 LIMD2Q9BT23 127 aa13.47□□□□□ -0.25
CCND3-223ENST00000616010 DEFB116Q30KQ4 102 aa13.46□□□□□ -0.26
CCND3-223ENST00000616010 OXTP01178 125 aa13.44□□□□□ -0.26
CCND3-223ENST00000616010 MT1HL1P0DM35 61 aa13.44□□□□□ -0.26
CCND3-223ENST00000616010 Q5XG85 94 aa13.44□□□□□ -0.26
CCND3-223ENST00000616010 LINC00472Q9H8W2 130 aa13.44□□□□□ -0.26
CCND3-223ENST00000616010 RPS29P62273 56 aaKnown RBP13.43□□□□□ -0.26
CCND3-223ENST00000616010 IGKV3D-7A0A0C4DH55 119 aa13.42□□□□□ -0.26
CCND3-223ENST00000616010 Q96NJ1 140 aa13.42□□□□□ -0.26
CCND3-223ENST00000616010 BPY2O14599 106 aa13.41□□□□□ -0.26
CCND3-223ENST00000616010 MT-ATP8P03928 68 aa13.4□□□□□ -0.26
CCND3-223ENST00000616010 ATP5EP2Q5VTU8 51 aa13.4□□□□□ -0.26
CCND3-223ENST00000616010 SIGMAR1Q99720 223 aa13.4□□□□□ -0.26
CCND3-223ENST00000616010 ASB16-AS1Q495Z4 193 aa13.39□□□□□ -0.27
CCND3-223ENST00000616010 CXCL6P80162 114 aa13.37□□□□□ -0.27
CCND3-223ENST00000616010 KRTAP29-1A8MX34 341 aaPredicted RBP13.35□□□□□ -0.27
CCND3-223ENST00000616010 IGKV4-1P06312 121 aa13.34□□□□□ -0.27
CCND3-223ENST00000616010 C1orf195Q5TG92 126 aa13.34□□□□□ -0.27
CCND3-223ENST00000616010 DSCR10P59022 87 aa13.32□□□□□ -0.28
CCND3-223ENST00000616010 Q8N9L7 120 aa13.32□□□□□ -0.28
CCND3-223ENST00000616010 J3KT08 172 aa13.31□□□□□ -0.28
CCND3-223ENST00000616010 DMBT1Q9UGM3 2413 aaPredicted RBP13.3□□□□□ -0.28
CCND3-223ENST00000616010 K7EQZ3 153 aa13.27□□□□□ -0.28
CCND3-223ENST00000616010 HIST1H4AP62805 103 aaKnown RBP13.27□□□□□ -0.29
CCND3-223ENST00000616010 A8MWP4 228 aa13.25□□□□□ -0.29
CCND3-223ENST00000616010 RETNLBQ9BQ08 111 aa13.25□□□□□ -0.29
CCND3-223ENST00000616010 J3QL48 77 aa13.22□□□□□ -0.29
CCND3-223ENST00000616010 A0A087WVE0 104 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms