RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 LAMA1P25391 3075 aa7.43□□□□□ -1.22
SLC6A6-204ENST00000613060 PLAC8Q9NZF1 115 aa7.43□□□□□ -1.22
SLC6A6-204ENST00000613060 WDFY3Q8IZQ1 3526 aa7.43□□□□□ -1.22
SLC6A6-204ENST00000613060 PRUNE2Q8WUY3 3088 aa7.41□□□□□ -1.22
SLC6A6-204ENST00000613060 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
SLC6A6-204ENST00000613060 POLQO75417 2590 aa7.41□□□□□ -1.22
SLC6A6-204ENST00000613060 Q75L30 129 aa7.39□□□□□ -1.23
SLC6A6-204ENST00000613060 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
SLC6A6-204ENST00000613060 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
SLC6A6-204ENST00000613060 VPS13AQ96RL7 3174 aa7.36□□□□□ -1.23
SLC6A6-204ENST00000613060 Q8N9P0 234 aaPredicted RBP7.36□□□□□ -1.23
SLC6A6-204ENST00000613060 ANKRD11Q6UB99 2663 aaPredicted RBP7.36□□□□□ -1.23
SLC6A6-204ENST00000613060 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
SLC6A6-204ENST00000613060 KRTAP10-2P60368 255 aa7.35□□□□□ -1.23
SLC6A6-204ENST00000613060 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
SLC6A6-204ENST00000613060 MMP24-AS1A0A0U1RRL7 71 aa7.34□□□□□ -1.23
SLC6A6-204ENST00000613060 CFAP54Q96N23 3096 aa7.34□□□□□ -1.24
SLC6A6-204ENST00000613060 Q5W150 140 aa7.33□□□□□ -1.24
SLC6A6-204ENST00000613060 TRIOO75962 3097 aa7.32□□□□□ -1.24
SLC6A6-204ENST00000613060 FREM2Q5SZK8 3169 aa7.31□□□□□ -1.24
SLC6A6-204ENST00000613060 CEP295Q9C0D2 2601 aa7.31□□□□□ -1.24
SLC6A6-204ENST00000613060 ROMO1P60602 79 aa7.3□□□□□ -1.24
SLC6A6-204ENST00000613060 FP248Q71RG6 208 aaPredicted RBP7.3□□□□□ -1.24
SLC6A6-204ENST00000613060 ANKRD17O75179 2603 aaKnown RBP7.3□□□□□ -1.24
SLC6A6-204ENST00000613060 SPTBN4Q9H254 2564 aa7.29□□□□□ -1.24
SLC6A6-204ENST00000613060 KRTAP1-1Q07627 177 aa7.29□□□□□ -1.24
SLC6A6-204ENST00000613060 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
SLC6A6-204ENST00000613060 COL6A3P12111 3177 aa7.29□□□□□ -1.24
SLC6A6-204ENST00000613060 REV3LO60673 3130 aa7.29□□□□□ -1.24
SLC6A6-204ENST00000613060 MGAM2Q2M2H8 2515 aa7.26□□□□□ -1.25
SLC6A6-204ENST00000613060 P0C880 135 aa7.24□□□□□ -1.25
SLC6A6-204ENST00000613060 PRAC1Q96KF2 57 aa7.23□□□□□ -1.25
SLC6A6-204ENST00000613060 FRYLO94915 3013 aa7.23□□□□□ -1.25
SLC6A6-204ENST00000613060 SPRR1BP22528 89 aa7.21□□□□□ -1.25
SLC6A6-204ENST00000613060 CR1P17927 2039 aa7.21□□□□□ -1.26
SLC6A6-204ENST00000613060 A0A1B0GVY2 172 aa7.21□□□□□ -1.26
SLC6A6-204ENST00000613060 SPATA8Q6RVD6 105 aa7.19□□□□□ -1.26
SLC6A6-204ENST00000613060 SPRR1AP35321 89 aa7.18□□□□□ -1.26
SLC6A6-204ENST00000613060 H3BS24 57 aa7.17□□□□□ -1.26
SLC6A6-204ENST00000613060 LINC00472Q9H8W2 130 aa7.17□□□□□ -1.26
SLC6A6-204ENST00000613060 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
SLC6A6-204ENST00000613060 Q8NDZ9 215 aa7.16□□□□□ -1.26
SLC6A6-204ENST00000613060 CHD9Q3L8U1 2897 aa7.16□□□□□ -1.26
SLC6A6-204ENST00000613060 USP24Q9UPU5 2620 aa7.16□□□□□ -1.26
SLC6A6-204ENST00000613060 FRYQ5TBA9 3013 aa7.15□□□□□ -1.27
SLC6A6-204ENST00000613060 A8MUU9 505 aa7.14□□□□□ -1.27
SLC6A6-204ENST00000613060 FLNBO75369 2602 aaKnown RBP7.12□□□□□ -1.27
SLC6A6-204ENST00000613060 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
SLC6A6-204ENST00000613060 DCHS1Q96JQ0 3298 aa7.1□□□□□ -1.27
SLC6A6-204ENST00000613060 PRRC2CQ9Y520 2896 aaKnown RBP7.09□□□□□ -1.27
SLC6A6-204ENST00000613060 Q5VV11 94 aa7.09□□□□□ -1.27
SLC6A6-204ENST00000613060 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
SLC6A6-204ENST00000613060 PANO1I0J062 215 aa7.08□□□□□ -1.28
SLC6A6-204ENST00000613060 ASPMQ8IZT6 3477 aa7.07□□□□□ -1.28
SLC6A6-204ENST00000613060 EPG5Q9HCE0 2579 aa7.07□□□□□ -1.28
SLC6A6-204ENST00000613060 Q6ZR54 194 aa7.06□□□□□ -1.28
SLC6A6-204ENST00000613060 KRTAP26-1Q6PEX3 210 aa7.06□□□□□ -1.28
SLC6A6-204ENST00000613060 ZFHX4Q86UP3 3567 aa7.05□□□□□ -1.28
SLC6A6-204ENST00000613060 HECTD1Q9ULT8 2610 aa7.05□□□□□ -1.28
SLC6A6-204ENST00000613060 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
SLC6A6-204ENST00000613060 TRANK1O15050 2925 aa7.04□□□□□ -1.28
SLC6A6-204ENST00000613060 DMDP11532 3685 aa7.03□□□□□ -1.28
SLC6A6-204ENST00000613060 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
SLC6A6-204ENST00000613060 NBEAQ8NFP9 2946 aa7.01□□□□□ -1.29
SLC6A6-204ENST00000613060 ATRQ13535 2644 aa7.01□□□□□ -1.29
SLC6A6-204ENST00000613060 STAB1Q9NY15 2570 aa7□□□□□ -1.29
SLC6A6-204ENST00000613060 MAST4O15021 2626 aa6.98□□□□□ -1.29
SLC6A6-204ENST00000613060 TNP1P09430 55 aa6.98□□□□□ -1.29
SLC6A6-204ENST00000613060 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
SLC6A6-204ENST00000613060 KRTAP16-1A8MUX0 517 aa6.96□□□□□ -1.29
SLC6A6-204ENST00000613060 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
SLC6A6-204ENST00000613060 A0A087X002 238 aa6.94□□□□□ -1.3
SLC6A6-204ENST00000613060 Q5XG85 94 aa6.93□□□□□ -1.3
SLC6A6-204ENST00000613060 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
SLC6A6-204ENST00000613060 CSMD1Q96PZ7 3565 aa6.91□□□□□ -1.3
SLC6A6-204ENST00000613060 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.31
SLC6A6-204ENST00000613060 DSPP15924 2871 aaKnown RBP6.9□□□□□ -1.31
SLC6A6-204ENST00000613060 SMG1Q96Q15 3661 aaKnown RBP6.87□□□□□ -1.31
SLC6A6-204ENST00000613060 LOC400499M0QZD8 3231 aa6.86□□□□□ -1.31
SLC6A6-204ENST00000613060 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
SLC6A6-204ENST00000613060 A8MU10 97 aa6.83□□□□□ -1.32
SLC6A6-204ENST00000613060 LAMA5O15230 3695 aa6.83□□□□□ -1.32
SLC6A6-204ENST00000613060 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
SLC6A6-204ENST00000613060 DMBT1Q9UGM3 2413 aaPredicted RBP6.79□□□□□ -1.32
SLC6A6-204ENST00000613060 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
SLC6A6-204ENST00000613060 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
SLC6A6-204ENST00000613060 CYSTM1Q9H1C7 97 aa6.78□□□□□ -1.32
SLC6A6-204ENST00000613060 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
SLC6A6-204ENST00000613060 DMXL2Q8TDJ6 3036 aa6.76□□□□□ -1.33
SLC6A6-204ENST00000613060 KALRNO60229 2985 aa6.74□□□□□ -1.33
SLC6A6-204ENST00000613060 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
SLC6A6-204ENST00000613060 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
SLC6A6-204ENST00000613060 MUC3AQ02505 3323 aa6.71□□□□□ -1.33
SLC6A6-204ENST00000613060 ZZEF1O43149 2961 aa6.7□□□□□ -1.34
SLC6A6-204ENST00000613060 FLNAP21333 2647 aaKnown RBP6.7□□□□□ -1.34
SLC6A6-204ENST00000613060 STAB2Q8WWQ8 2551 aa6.69□□□□□ -1.34
SLC6A6-204ENST00000613060 HELZ2Q9BYK8 2649 aaKnown RBP6.69□□□□□ -1.34
SLC6A6-204ENST00000613060 MGAQ8IWI9 3026 aa6.68□□□□□ -1.34
SLC6A6-204ENST00000613060 SVEP1Q4LDE5 3571 aa6.68□□□□□ -1.34
SLC6A6-204ENST00000613060 NDUFAF8A1L188 74 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms