RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SMCR5Q8TEV8 140 aa5.53□□□□□ -1.52
CCDC47-207ENST00000612558 ERC2-IT1O76042 136 aa5.52□□□□□ -1.53
CCDC47-207ENST00000612558 UBE2AP49459 152 aa5.52□□□□□ -1.53
CCDC47-207ENST00000612558 NDUFV3P56181 108 aaKnown RBP5.52□□□□□ -1.53
CCDC47-207ENST00000612558 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
CCDC47-207ENST00000612558 DEFB105AQ8NG35 78 aa5.52□□□□□ -1.53
CCDC47-207ENST00000612558 VPS25Q9BRG1 176 aa5.52□□□□□ -1.53
CCDC47-207ENST00000612558 C14orf132Q9NPU4 83 aa5.52□□□□□ -1.53
CCDC47-207ENST00000612558 RYR2Q92736 4967 aa5.52□□□□□ -1.53
CCDC47-207ENST00000612558 IGLV5-48A0A075B6I7 105 aa5.51□□□□□ -1.53
CCDC47-207ENST00000612558 FAM240AA0A1B0GVK7 77 aa5.51□□□□□ -1.53
CCDC47-207ENST00000612558 LINC01547P58512 204 aaPredicted RBP5.51□□□□□ -1.53
CCDC47-207ENST00000612558 Q6ZSA8 131 aa5.51□□□□□ -1.53
CCDC47-207ENST00000612558 Q8N377 158 aa5.51□□□□□ -1.53
CCDC47-207ENST00000612558 A0A1B0GV72 72 aa5.5□□□□□ -1.53
CCDC47-207ENST00000612558 ACYP1P07311 99 aa5.5□□□□□ -1.53
CCDC47-207ENST00000612558 KRTAP10-1P60331 282 aa5.5□□□□□ -1.53
CCDC47-207ENST00000612558 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
CCDC47-207ENST00000612558 HIGD2AQ9BW72 106 aa5.5□□□□□ -1.53
CCDC47-207ENST00000612558 FAM30AQ9NZY2 134 aa5.5□□□□□ -1.53
CCDC47-207ENST00000612558 DSCR8Q96T75 97 aa5.5□□□□□ -1.53
CCDC47-207ENST00000612558 LOC110117498A0A087WWA1 95 aa5.49□□□□□ -1.53
CCDC47-207ENST00000612558 CCKP06307 115 aa5.49□□□□□ -1.53
CCDC47-207ENST00000612558 PDE6GP18545 87 aa5.49□□□□□ -1.53
CCDC47-207ENST00000612558 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
CCDC47-207ENST00000612558 KRTAP13-1Q8IUC0 172 aa5.49□□□□□ -1.53
CCDC47-207ENST00000612558 CIRBP-AS1Q8TBR5 109 aa5.49□□□□□ -1.53
CCDC47-207ENST00000612558 PSORS1C2Q9UIG4 136 aa5.49□□□□□ -1.53
CCDC47-207ENST00000612558 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
CCDC47-207ENST00000612558 KMT2CQ8NEZ4 4911 aaKnown RBP5.48□□□□□ -1.53
CCDC47-207ENST00000612558 Q6ZQT0 140 aa5.47□□□□□ -1.53
CCDC47-207ENST00000612558 SCXQ7RTU7 201 aa5.47□□□□□ -1.53
CCDC47-207ENST00000612558 TRBV7-4A0A0J9YYF1 115 aa5.46□□□□□ -1.53
CCDC47-207ENST00000612558 C21orf62-AS1Q17RA5 79 aa5.46□□□□□ -1.53
CCDC47-207ENST00000612558 C1orf137Q5JT78 98 aa5.46□□□□□ -1.53
CCDC47-207ENST00000612558 PKHD1P08F94 4074 aa5.46□□□□□ -1.54
CCDC47-207ENST00000612558 A0A1B0GVY2 172 aa5.46□□□□□ -1.54
CCDC47-207ENST00000612558 ZNF861PO60384 105 aa5.45□□□□□ -1.54
CCDC47-207ENST00000612558 SPRR1BP22528 89 aa5.45□□□□□ -1.54
CCDC47-207ENST00000612558 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
CCDC47-207ENST00000612558 C3orf22Q8N5N4 141 aa5.45□□□□□ -1.54
CCDC47-207ENST00000612558 LRP1BQ9NZR2 4599 aa5.44□□□□□ -1.54
CCDC47-207ENST00000612558 SIGMAR1Q99720 223 aa5.44□□□□□ -1.54
CCDC47-207ENST00000612558 F8WEM9 126 aa5.43□□□□□ -1.54
CCDC47-207ENST00000612558 IGLV7-43P04211 117 aa5.43□□□□□ -1.54
CCDC47-207ENST00000612558 SRRM2Q9UQ35 2752 aaKnown RBP5.43□□□□□ -1.54
CCDC47-207ENST00000612558 XGP55808 180 aa5.42□□□□□ -1.54
CCDC47-207ENST00000612558 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
CCDC47-207ENST00000612558 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
CCDC47-207ENST00000612558 HAMPP81172 84 aa5.42□□□□□ -1.54
CCDC47-207ENST00000612558 ZNF706Q9Y5V0 76 aaPredicted RBP5.42□□□□□ -1.54
CCDC47-207ENST00000612558 IGLV8-61A0A075B6I0 122 aa5.41□□□□□ -1.54
CCDC47-207ENST00000612558 LINC00643Q86TS7 51 aa5.41□□□□□ -1.54
CCDC47-207ENST00000612558 SPRR4Q96PI1 79 aa5.41□□□□□ -1.54
CCDC47-207ENST00000612558 MT-ATP8P03928 68 aa5.4□□□□□ -1.55
CCDC47-207ENST00000612558 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.55
CCDC47-207ENST00000612558 LINC00483Q53H64 154 aa5.39□□□□□ -1.55
CCDC47-207ENST00000612558 A0A1B0GW54 56 aa5.38□□□□□ -1.55
CCDC47-207ENST00000612558 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
CCDC47-207ENST00000612558 UBL5Q9BZL1 73 aa5.38□□□□□ -1.55
CCDC47-207ENST00000612558 A0A1W2PNM2 257 aa5.38□□□□□ -1.55
CCDC47-207ENST00000612558 Q6JHZ5 121 aa5.38□□□□□ -1.55
CCDC47-207ENST00000612558 Q8NBF4 154 aa5.38□□□□□ -1.55
CCDC47-207ENST00000612558 IGFL1Q6UW32 110 aa5.37□□□□□ -1.55
CCDC47-207ENST00000612558 RYR3Q15413 4870 aa5.35□□□□□ -1.55
CCDC47-207ENST00000612558 CRYGAP11844 174 aa5.35□□□□□ -1.55
CCDC47-207ENST00000612558 Q6ZVQ6 151 aa5.35□□□□□ -1.55
CCDC47-207ENST00000612558 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
CCDC47-207ENST00000612558 RPL37AP61513 92 aaKnown RBP5.34□□□□□ -1.55
CCDC47-207ENST00000612558 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 TRBV7-7A0A0K0K1E9 115 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 C9orf153Q5TBE3 101 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 ATP5EP2Q5VTU8 51 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 Q6Q795 121 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 IMUPQ9GZP8 106 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 SCGB1A1P11684 91 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 NREPQ16612 68 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 ANAPC11Q9NYG5 84 aa5.33□□□□□ -1.56
CCDC47-207ENST00000612558 IGKV3D-7A0A0C4DH55 119 aa5.32□□□□□ -1.56
CCDC47-207ENST00000612558 SMR3BP02814 79 aaPredicted RBP5.3□□□□□ -1.56
CCDC47-207ENST00000612558 MOBPQ13875 183 aa5.3□□□□□ -1.56
CCDC47-207ENST00000612558 CXCL6P80162 114 aa5.29□□□□□ -1.56
CCDC47-207ENST00000612558 FAM229BQ4G0N7 80 aa5.29□□□□□ -1.56
CCDC47-207ENST00000612558 SPINK6Q6UWN8 80 aa5.29□□□□□ -1.56
CCDC47-207ENST00000612558 A0A087WSZ3 146 aa5.29□□□□□ -1.56
CCDC47-207ENST00000612558 SSBP3-AS1Q7Z2R9 100 aa5.29□□□□□ -1.56
CCDC47-207ENST00000612558 FAT1Q14517 4588 aa5.27□□□□□ -1.57
CCDC47-207ENST00000612558 BPY2O14599 106 aa5.27□□□□□ -1.57
CCDC47-207ENST00000612558 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
CCDC47-207ENST00000612558 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
CCDC47-207ENST00000612558 HIST1H4AP62805 103 aaKnown RBP5.26□□□□□ -1.57
CCDC47-207ENST00000612558 A0A087X002 238 aa5.25□□□□□ -1.57
CCDC47-207ENST00000612558 CDK2AP2O75956 126 aa5.25□□□□□ -1.57
CCDC47-207ENST00000612558 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
CCDC47-207ENST00000612558 HRCT1Q6UXD1 115 aa5.25□□□□□ -1.57
CCDC47-207ENST00000612558 CD164Q04900 197 aa5.24□□□□□ -1.57
CCDC47-207ENST00000612558 KRTAP13-2Q52LG2 175 aa5.24□□□□□ -1.57
CCDC47-207ENST00000612558 A0A087WVE0 104 aa5.23□□□□□ -1.57
CCDC47-207ENST00000612558 FAM236AA0A1B0GUQ0 79 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms