RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SPINK7P58062 85 aa8.05□□□□□ -1.12
USP6NL-205ENST00000609104 DNAH14Q0VDD8 3507 aa8.04□□□□□ -1.12
USP6NL-205ENST00000609104 Q5W150 140 aa8.02□□□□□ -1.12
USP6NL-205ENST00000609104 Q8NDZ9 215 aa8.02□□□□□ -1.13
USP6NL-205ENST00000609104 MGAM2Q2M2H8 2515 aa8.02□□□□□ -1.13
USP6NL-205ENST00000609104 A0A0A0MQY5 61 aa8.01□□□□□ -1.13
USP6NL-205ENST00000609104 RANBP2P49792 3224 aaKnown RBP8□□□□□ -1.13
USP6NL-205ENST00000609104 KRTAP1-1Q07627 177 aa7.99□□□□□ -1.13
USP6NL-205ENST00000609104 R4GN34 69 aa7.98□□□□□ -1.13
USP6NL-205ENST00000609104 CHD7Q9P2D1 2997 aa7.97□□□□□ -1.13
USP6NL-205ENST00000609104 ITPR3Q14573 2671 aa7.97□□□□□ -1.13
USP6NL-205ENST00000609104 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.13
USP6NL-205ENST00000609104 BRCA2P51587 3418 aa7.96□□□□□ -1.13
USP6NL-205ENST00000609104 FLNAP21333 2647 aaKnown RBP7.96□□□□□ -1.14
USP6NL-205ENST00000609104 LINC00472Q9H8W2 130 aa7.95□□□□□ -1.14
USP6NL-205ENST00000609104 SPRR1AP35321 89 aa7.94□□□□□ -1.14
USP6NL-205ENST00000609104 EPG5Q9HCE0 2579 aa7.93□□□□□ -1.14
USP6NL-205ENST00000609104 ROMO1P60602 79 aa7.93□□□□□ -1.14
USP6NL-205ENST00000609104 VPS13AQ96RL7 3174 aa7.93□□□□□ -1.14
USP6NL-205ENST00000609104 CHD6Q8TD26 2715 aa7.92□□□□□ -1.14
USP6NL-205ENST00000609104 PRUNE2Q8WUY3 3088 aa7.9□□□□□ -1.15
USP6NL-205ENST00000609104 CFAP46Q8IYW2 2715 aa7.89□□□□□ -1.15
USP6NL-205ENST00000609104 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
USP6NL-205ENST00000609104 LAMA3Q16787 3333 aa7.87□□□□□ -1.15
USP6NL-205ENST00000609104 OXTP01178 125 aa7.87□□□□□ -1.15
USP6NL-205ENST00000609104 ATRQ13535 2644 aa7.86□□□□□ -1.15
USP6NL-205ENST00000609104 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
USP6NL-205ENST00000609104 HECTD1Q9ULT8 2610 aa7.86□□□□□ -1.15
USP6NL-205ENST00000609104 KRTAP26-1Q6PEX3 210 aa7.86□□□□□ -1.15
USP6NL-205ENST00000609104 MGAQ8IWI9 3026 aa7.84□□□□□ -1.15
USP6NL-205ENST00000609104 UNC80Q8N2C7 3258 aa7.84□□□□□ -1.16
USP6NL-205ENST00000609104 M0QZ58 72 aa7.82□□□□□ -1.16
USP6NL-205ENST00000609104 SPRR1BP22528 89 aa7.82□□□□□ -1.16
USP6NL-205ENST00000609104 SPATA8Q6RVD6 105 aa7.81□□□□□ -1.16
USP6NL-205ENST00000609104 SEC61BP60468 96 aaKnown RBP7.79□□□□□ -1.16
USP6NL-205ENST00000609104 CDH23Q9H251 3354 aa7.79□□□□□ -1.16
USP6NL-205ENST00000609104 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
USP6NL-205ENST00000609104 NBEAL1Q6ZS30 2694 aa7.79□□□□□ -1.16
USP6NL-205ENST00000609104 WDFY4Q6ZS81 3184 aa7.78□□□□□ -1.16
USP6NL-205ENST00000609104 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
USP6NL-205ENST00000609104 FRYQ5TBA9 3013 aa7.77□□□□□ -1.17
USP6NL-205ENST00000609104 MAST4O15021 2626 aa7.76□□□□□ -1.17
USP6NL-205ENST00000609104 TEX15Q9BXT5 2789 aa7.75□□□□□ -1.17
USP6NL-205ENST00000609104 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
USP6NL-205ENST00000609104 Q5VSD8 79 aa7.74□□□□□ -1.17
USP6NL-205ENST00000609104 CENPEQ02224 2701 aa7.74□□□□□ -1.17
USP6NL-205ENST00000609104 Q6ZR54 194 aa7.73□□□□□ -1.17
USP6NL-205ENST00000609104 FLNBO75369 2602 aaKnown RBP7.72□□□□□ -1.17
USP6NL-205ENST00000609104 KRTAP10-1P60331 282 aa7.71□□□□□ -1.17
USP6NL-205ENST00000609104 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
USP6NL-205ENST00000609104 COL6A3P12111 3177 aa7.71□□□□□ -1.18
USP6NL-205ENST00000609104 SZT2Q5T011 3432 aa7.7□□□□□ -1.18
USP6NL-205ENST00000609104 HELZ2Q9BYK8 2649 aaKnown RBP7.69□□□□□ -1.18
USP6NL-205ENST00000609104 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
USP6NL-205ENST00000609104 KALRNO60229 2985 aa7.67□□□□□ -1.18
USP6NL-205ENST00000609104 HTTP42858 3142 aa7.66□□□□□ -1.18
USP6NL-205ENST00000609104 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
USP6NL-205ENST00000609104 LAMA1P25391 3075 aa7.64□□□□□ -1.19
USP6NL-205ENST00000609104 VCANP13611 3396 aa7.64□□□□□ -1.19
USP6NL-205ENST00000609104 KRTAP16-1A8MUX0 517 aa7.63□□□□□ -1.19
USP6NL-205ENST00000609104 GCN1Q92616 2671 aaKnown RBP7.61□□□□□ -1.19
USP6NL-205ENST00000609104 A0A087X002 238 aa7.61□□□□□ -1.19
USP6NL-205ENST00000609104 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
USP6NL-205ENST00000609104 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
USP6NL-205ENST00000609104 PANO1I0J062 215 aa7.6□□□□□ -1.19
USP6NL-205ENST00000609104 STAB1Q9NY15 2570 aa7.6□□□□□ -1.19
USP6NL-205ENST00000609104 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
USP6NL-205ENST00000609104 UNC79Q9P2D8 2635 aa7.59□□□□□ -1.19
USP6NL-205ENST00000609104 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
USP6NL-205ENST00000609104 A8MU10 97 aa7.56□□□□□ -1.2
USP6NL-205ENST00000609104 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
USP6NL-205ENST00000609104 SPEGQ15772 3267 aa7.56□□□□□ -1.2
USP6NL-205ENST00000609104 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
USP6NL-205ENST00000609104 NBEAL2Q6ZNJ1 2754 aa7.55□□□□□ -1.2
USP6NL-205ENST00000609104 CFAP47Q6ZTR5 3102 aa7.55□□□□□ -1.2
USP6NL-205ENST00000609104 TRANK1O15050 2925 aa7.54□□□□□ -1.2
USP6NL-205ENST00000609104 MAP1AP78559 2803 aaPredicted RBP7.53□□□□□ -1.2
USP6NL-205ENST00000609104 DSPP15924 2871 aaKnown RBP7.52□□□□□ -1.21
USP6NL-205ENST00000609104 A8MUU9 505 aa7.5□□□□□ -1.21
USP6NL-205ENST00000609104 LCE6AA0A183 80 aa7.5□□□□□ -1.21
USP6NL-205ENST00000609104 CHD9Q3L8U1 2897 aa7.5□□□□□ -1.21
USP6NL-205ENST00000609104 A6NN06 94 aa7.49□□□□□ -1.21
USP6NL-205ENST00000609104 APCP25054 2843 aa7.49□□□□□ -1.21
USP6NL-205ENST00000609104 LRBAP50851 2863 aa7.49□□□□□ -1.21
USP6NL-205ENST00000609104 NOTCH1P46531 2555 aa7.47□□□□□ -1.21
USP6NL-205ENST00000609104 KMT2BQ9UMN6 2715 aaPredicted RBP7.46□□□□□ -1.22
USP6NL-205ENST00000609104 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.22
USP6NL-205ENST00000609104 ASH1LQ9NR48 2969 aaKnown RBP7.45□□□□□ -1.22
USP6NL-205ENST00000609104 NDUFAF8A1L188 74 aa7.45□□□□□ -1.22
USP6NL-205ENST00000609104 DMXL2Q8TDJ6 3036 aa7.43□□□□□ -1.22
USP6NL-205ENST00000609104 ITPR2Q14571 2701 aa7.42□□□□□ -1.22
USP6NL-205ENST00000609104 FRYLO94915 3013 aa7.42□□□□□ -1.22
USP6NL-205ENST00000609104 USP34Q70CQ2 3546 aa7.41□□□□□ -1.22
USP6NL-205ENST00000609104 STAB2Q8WWQ8 2551 aa7.4□□□□□ -1.22
USP6NL-205ENST00000609104 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.23
USP6NL-205ENST00000609104 CRYBG3Q68DQ2 2970 aa7.38□□□□□ -1.23
USP6NL-205ENST00000609104 BOD1L1Q8NFC6 3051 aa7.36□□□□□ -1.23
USP6NL-205ENST00000609104 COL12A1Q99715 3063 aa7.34□□□□□ -1.23
USP6NL-205ENST00000609104 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
USP6NL-205ENST00000609104 ZNF292O60281 2723 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms