RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 C21orf62-AS1Q17RA5 79 aa13.14□□□□□ -0.31
USP6NL-204ENST00000606752 PKHD1P08F94 4074 aa13.14□□□□□ -0.31
USP6NL-204ENST00000606752 F8WEM9 126 aa13.13□□□□□ -0.31
USP6NL-204ENST00000606752 SRRM2Q9UQ35 2752 aaKnown RBP13.12□□□□□ -0.31
USP6NL-204ENST00000606752 SPRR4Q96PI1 79 aa13.11□□□□□ -0.31
USP6NL-204ENST00000606752 SIGMAR1Q99720 223 aa13.11□□□□□ -0.31
USP6NL-204ENST00000606752 LINC00846Q9NV44 126 aa13.11□□□□□ -0.31
USP6NL-204ENST00000606752 ZNF706Q9Y5V0 76 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-204ENST00000606752 XGP55808 180 aa13.1□□□□□ -0.31
USP6NL-204ENST00000606752 LRP1BQ9NZR2 4599 aa13.1□□□□□ -0.31
USP6NL-204ENST00000606752 IGLV8-61A0A075B6I0 122 aa13.07□□□□□ -0.32
USP6NL-204ENST00000606752 LINC00483Q53H64 154 aa13.06□□□□□ -0.32
USP6NL-204ENST00000606752 DYNC1H1Q14204 4646 aaKnown RBP13.05□□□□□ -0.32
USP6NL-204ENST00000606752 MT-ATP8P03928 68 aa13.04□□□□□ -0.32
USP6NL-204ENST00000606752 LINC00643Q86TS7 51 aa13.04□□□□□ -0.32
USP6NL-204ENST00000606752 A0A1W2PNM2 257 aa13.01□□□□□ -0.33
USP6NL-204ENST00000606752 IGFL1Q6UW32 110 aa13.01□□□□□ -0.33
USP6NL-204ENST00000606752 UBL5Q9BZL1 73 aa13□□□□□ -0.33
USP6NL-204ENST00000606752 Q8NBF4 154 aa12.99□□□□□ -0.33
USP6NL-204ENST00000606752 A0A1B0GW54 56 aa12.99□□□□□ -0.33
USP6NL-204ENST00000606752 Q6JHZ5 121 aa12.99□□□□□ -0.33
USP6NL-204ENST00000606752 RYR3Q15413 4870 aa12.96□□□□□ -0.33
USP6NL-204ENST00000606752 A0A0G2JQZ4 141 aa12.95□□□□□ -0.34
USP6NL-204ENST00000606752 ANAPC11Q9NYG5 84 aa12.95□□□□□ -0.34
USP6NL-204ENST00000606752 IGLV9-49A0A0B4J1Y8 123 aa12.94□□□□□ -0.34
USP6NL-204ENST00000606752 CRYGAP11844 174 aa12.93□□□□□ -0.34
USP6NL-204ENST00000606752 RPL37AP61513 92 aaKnown RBP12.92□□□□□ -0.34
USP6NL-204ENST00000606752 Q6ZVQ6 151 aa12.92□□□□□ -0.34
USP6NL-204ENST00000606752 C9orf153Q5TBE3 101 aa12.91□□□□□ -0.34
USP6NL-204ENST00000606752 VPS13BQ7Z7G8 4022 aa12.91□□□□□ -0.34
USP6NL-204ENST00000606752 SMR3BP02814 79 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-204ENST00000606752 APOBP04114 4563 aaKnown RBP12.88□□□□□ -0.35
USP6NL-204ENST00000606752 TRBV7-7A0A0K0K1E9 115 aa12.88□□□□□ -0.35
USP6NL-204ENST00000606752 NREPQ16612 68 aa12.87□□□□□ -0.35
USP6NL-204ENST00000606752 Q6Q795 121 aa12.87□□□□□ -0.35
USP6NL-204ENST00000606752 IGKV3D-7A0A0C4DH55 119 aa12.86□□□□□ -0.35
USP6NL-204ENST00000606752 ATP5EP2Q5VTU8 51 aa12.86□□□□□ -0.35
USP6NL-204ENST00000606752 MOBPQ13875 183 aa12.85□□□□□ -0.35
USP6NL-204ENST00000606752 IMUPQ9GZP8 106 aa12.85□□□□□ -0.35
USP6NL-204ENST00000606752 SPINK6Q6UWN8 80 aa12.82□□□□□ -0.36
USP6NL-204ENST00000606752 A0A087WSZ3 146 aa12.81□□□□□ -0.36
USP6NL-204ENST00000606752 SCGB1A1P11684 91 aa12.8□□□□□ -0.36
USP6NL-204ENST00000606752 FAM229BQ4G0N7 80 aa12.8□□□□□ -0.36
USP6NL-204ENST00000606752 CXCL6P80162 114 aa12.78□□□□□ -0.36
USP6NL-204ENST00000606752 KRTAP1-4P0C5Y4 121 aa12.78□□□□□ -0.36
USP6NL-204ENST00000606752 SSBP3-AS1Q7Z2R9 100 aa12.77□□□□□ -0.37
USP6NL-204ENST00000606752 KRTAP10-4P60372 401 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-204ENST00000606752 A0A087X002 238 aa12.75□□□□□ -0.37
USP6NL-204ENST00000606752 CDK2AP2O75956 126 aa12.74□□□□□ -0.37
USP6NL-204ENST00000606752 BPY2O14599 106 aa12.73□□□□□ -0.37
USP6NL-204ENST00000606752 FAT1Q14517 4588 aa12.73□□□□□ -0.37
USP6NL-204ENST00000606752 PLA2G1BP04054 148 aaKnown RBP12.72□□□□□ -0.37
USP6NL-204ENST00000606752 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
USP6NL-204ENST00000606752 KRTAP13-2Q52LG2 175 aa12.72□□□□□ -0.37
USP6NL-204ENST00000606752 HRCT1Q6UXD1 115 aa12.72□□□□□ -0.37
USP6NL-204ENST00000606752 FAM229AH3BQW9 127 aa12.67□□□□□ -0.38
USP6NL-204ENST00000606752 CD164Q04900 197 aa12.67□□□□□ -0.38
USP6NL-204ENST00000606752 A0A087WVE0 104 aa12.66□□□□□ -0.38
USP6NL-204ENST00000606752 SS18L2Q9UHA2 77 aa12.64□□□□□ -0.39
USP6NL-204ENST00000606752 LINC00472Q9H8W2 130 aa12.63□□□□□ -0.39
USP6NL-204ENST00000606752 FAM236AA0A1B0GUQ0 79 aa12.62□□□□□ -0.39
USP6NL-204ENST00000606752 FAM236BA0A1B0GV22 79 aa12.62□□□□□ -0.39
USP6NL-204ENST00000606752 DEFB116Q30KQ4 102 aa12.61□□□□□ -0.39
USP6NL-204ENST00000606752 DSCR10P59022 87 aa12.6□□□□□ -0.39
USP6NL-204ENST00000606752 Q8N9L7 120 aa12.6□□□□□ -0.39
USP6NL-204ENST00000606752 PCP4P48539 62 aa12.6□□□□□ -0.39
USP6NL-204ENST00000606752 TYMSOSQ8TAI1 123 aa12.6□□□□□ -0.39
USP6NL-204ENST00000606752 HSPG2P98160 4391 aa12.59□□□□□ -0.39
USP6NL-204ENST00000606752 IGKV4-1P06312 121 aa12.58□□□□□ -0.4
USP6NL-204ENST00000606752 Q5VSD8 79 aa12.57□□□□□ -0.4
USP6NL-204ENST00000606752 PRR26Q8N8Z3 221 aa12.56□□□□□ -0.4
USP6NL-204ENST00000606752 RYR1P21817 5038 aa12.55□□□□□ -0.4
USP6NL-204ENST00000606752 Q96NJ1 140 aa12.55□□□□□ -0.4
USP6NL-204ENST00000606752 J3KT08 172 aa12.54□□□□□ -0.4
USP6NL-204ENST00000606752 K7EQZ3 153 aa12.53□□□□□ -0.4
USP6NL-204ENST00000606752 C4orf48Q5BLP8 95 aa12.5□□□□□ -0.41
USP6NL-204ENST00000606752 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
USP6NL-204ENST00000606752 Q5XG85 94 aa12.49□□□□□ -0.41
USP6NL-204ENST00000606752 A8MWP4 228 aa12.48□□□□□ -0.41
USP6NL-204ENST00000606752 ASB16-AS1Q495Z4 193 aa12.48□□□□□ -0.41
USP6NL-204ENST00000606752 ANAPC13Q9BS18 74 aa12.48□□□□□ -0.41
USP6NL-204ENST00000606752 ATOX1O00244 68 aa12.46□□□□□ -0.41
USP6NL-204ENST00000606752 SPINK1P00995 79 aa12.46□□□□□ -0.42
USP6NL-204ENST00000606752 PRR15Q8IV56 129 aa12.45□□□□□ -0.42
USP6NL-204ENST00000606752 KIAA1109Q2LD37 5005 aa12.45□□□□□ -0.42
USP6NL-204ENST00000606752 LINC00304Q8N9R0 145 aa12.44□□□□□ -0.42
USP6NL-204ENST00000606752 LIMD2Q9BT23 127 aa12.44□□□□□ -0.42
USP6NL-204ENST00000606752 KRTAP17-1Q9BYP8 105 aa12.44□□□□□ -0.42
USP6NL-204ENST00000606752 NDUFB1O75438 58 aa12.43□□□□□ -0.42
USP6NL-204ENST00000606752 SPAG11AQ6PDA7 123 aa12.43□□□□□ -0.42
USP6NL-204ENST00000606752 Q8N1X5 172 aa12.43□□□□□ -0.42
USP6NL-204ENST00000606752 PKHD1L1Q86WI1 4243 aa12.43□□□□□ -0.42
USP6NL-204ENST00000606752 HCG22E2RYF7 251 aa12.38□□□□□ -0.43
USP6NL-204ENST00000606752 RPS29P62273 56 aaKnown RBP12.37□□□□□ -0.43
USP6NL-204ENST00000606752 C1orf195Q5TG92 126 aa12.36□□□□□ -0.43
USP6NL-204ENST00000606752 A0A1B0GVX0 72 aa12.33□□□□□ -0.44
USP6NL-204ENST00000606752 SMIM20Q8N5G0 67 aa12.32□□□□□ -0.44
USP6NL-204ENST00000606752 SERP2Q8N6R1 65 aa12.32□□□□□ -0.44
USP6NL-204ENST00000606752 WFDC13Q8IUB5 93 aa12.3□□□□□ -0.44
USP6NL-204ENST00000606752 IGHV6-1A0A0B4J1U7 121 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms