RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 RPL37P61927 97 aaKnown RBP12.59□□□□□ -0.39
SH3D19-211ENST00000604030 KRTAP1-5Q9BYS1 174 aa12.58□□□□□ -0.4
SH3D19-211ENST00000604030 ATRQ13535 2644 aa12.57□□□□□ -0.4
SH3D19-211ENST00000604030 BPTFQ12830 3046 aa12.57□□□□□ -0.4
SH3D19-211ENST00000604030 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
SH3D19-211ENST00000604030 ROMO1P60602 79 aa12.54□□□□□ -0.4
SH3D19-211ENST00000604030 A0A0A0MQY5 61 aa12.53□□□□□ -0.4
SH3D19-211ENST00000604030 H1FX-AS1Q4G0G2 97 aa12.51□□□□□ -0.41
SH3D19-211ENST00000604030 H3BS24 57 aa12.51□□□□□ -0.41
SH3D19-211ENST00000604030 R4GN34 69 aa12.47□□□□□ -0.41
SH3D19-211ENST00000604030 LCE6AA0A183 80 aa12.43□□□□□ -0.42
SH3D19-211ENST00000604030 SEC61BP60468 96 aaKnown RBP12.43□□□□□ -0.42
SH3D19-211ENST00000604030 SPATA8Q6RVD6 105 aa12.41□□□□□ -0.42
SH3D19-211ENST00000604030 MAST4O15021 2626 aa12.41□□□□□ -0.42
SH3D19-211ENST00000604030 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
SH3D19-211ENST00000604030 KRTAP10-1P60331 282 aa12.32□□□□□ -0.44
SH3D19-211ENST00000604030 RPS29P62273 56 aaKnown RBP12.3□□□□□ -0.44
SH3D19-211ENST00000604030 M0R2T5 61 aa12.28□□□□□ -0.44
SH3D19-211ENST00000604030 DNAH12Q6ZR08 3092 aa12.24□□□□□ -0.45
SH3D19-211ENST00000604030 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
SH3D19-211ENST00000604030 A6NN06 94 aa12.22□□□□□ -0.45
SH3D19-211ENST00000604030 PANO1I0J062 215 aa12.22□□□□□ -0.45
SH3D19-211ENST00000604030 M0QZ58 72 aa12.21□□□□□ -0.46
SH3D19-211ENST00000604030 CFAP46Q8IYW2 2715 aa12.2□□□□□ -0.46
SH3D19-211ENST00000604030 STAB1Q9NY15 2570 aa12.19□□□□□ -0.46
SH3D19-211ENST00000604030 Q5VSD8 79 aa12.19□□□□□ -0.46
SH3D19-211ENST00000604030 A0A087X002 238 aa12.14□□□□□ -0.47
SH3D19-211ENST00000604030 NBEAL1Q6ZS30 2694 aa12.12□□□□□ -0.47
SH3D19-211ENST00000604030 NOTCH2NLQ7Z3S9 236 aa12.11□□□□□ -0.47
SH3D19-211ENST00000604030 CHD7Q9P2D1 2997 aa12.1□□□□□ -0.47
SH3D19-211ENST00000604030 ADM2Q7Z4H4 148 aa12.09□□□□□ -0.47
SH3D19-211ENST00000604030 CHD6Q8TD26 2715 aa12.09□□□□□ -0.47
SH3D19-211ENST00000604030 AKAP13Q12802 2813 aa12.08□□□□□ -0.47
SH3D19-211ENST00000604030 KRTAP25-1Q3LHN0 102 aa12.06□□□□□ -0.48
SH3D19-211ENST00000604030 KRTAP13-1Q8IUC0 172 aa12.05□□□□□ -0.48
SH3D19-211ENST00000604030 UTRNP46939 3433 aa12.05□□□□□ -0.48
SH3D19-211ENST00000604030 UNC79Q9P2D8 2635 aa12.05□□□□□ -0.48
SH3D19-211ENST00000604030 KRTAP7-1Q8IUC3 87 aa12.04□□□□□ -0.48
SH3D19-211ENST00000604030 Q6ZRN7 208 aaPredicted RBP12.04□□□□□ -0.48
SH3D19-211ENST00000604030 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
SH3D19-211ENST00000604030 KRTAP11-1Q8IUC1 163 aa12□□□□□ -0.49
SH3D19-211ENST00000604030 GCN1Q92616 2671 aaKnown RBP12□□□□□ -0.49
SH3D19-211ENST00000604030 FLG2Q5D862 2391 aaPredicted RBP11.99□□□□□ -0.49
SH3D19-211ENST00000604030 CENPEQ02224 2701 aa11.99□□□□□ -0.49
SH3D19-211ENST00000604030 DMBT1Q9UGM3 2413 aaPredicted RBP11.96□□□□□ -0.49
SH3D19-211ENST00000604030 PLAC4Q8WY50 150 aa11.92□□□□□ -0.5
SH3D19-211ENST00000604030 TEX15Q9BXT5 2789 aa11.89□□□□□ -0.51
SH3D19-211ENST00000604030 ZNF292O60281 2723 aa11.89□□□□□ -0.51
SH3D19-211ENST00000604030 CEP350Q5VT06 3117 aa11.89□□□□□ -0.51
SH3D19-211ENST00000604030 KRTAP16-1A8MUX0 517 aa11.86□□□□□ -0.51
SH3D19-211ENST00000604030 TEP1Q99973 2627 aaKnown RBP11.85□□□□□ -0.51
SH3D19-211ENST00000604030 KRTAP13-2Q52LG2 175 aa11.84□□□□□ -0.51
SH3D19-211ENST00000604030 NOTCH1P46531 2555 aa11.82□□□□□ -0.52
SH3D19-211ENST00000604030 A8MU10 97 aa11.79□□□□□ -0.52
SH3D19-211ENST00000604030 TRANK1O15050 2925 aa11.78□□□□□ -0.52
SH3D19-211ENST00000604030 COL6A5A8TX70 2615 aa11.78□□□□□ -0.52
SH3D19-211ENST00000604030 A8MUU9 505 aa11.76□□□□□ -0.53
SH3D19-211ENST00000604030 C5orf42Q9H799 3197 aa11.76□□□□□ -0.53
SH3D19-211ENST00000604030 PCNTO95613 3336 aa11.71□□□□□ -0.54
SH3D19-211ENST00000604030 SETXQ7Z333 2677 aaKnown RBP11.69□□□□□ -0.54
SH3D19-211ENST00000604030 MGAQ8IWI9 3026 aa11.68□□□□□ -0.54
SH3D19-211ENST00000604030 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
SH3D19-211ENST00000604030 NBEAL2Q6ZNJ1 2754 aa11.64□□□□□ -0.55
SH3D19-211ENST00000604030 NSD1Q96L73 2696 aaPredicted RBP11.62□□□□□ -0.55
SH3D19-211ENST00000604030 STAB2Q8WWQ8 2551 aa11.55□□□□□ -0.56
SH3D19-211ENST00000604030 CFAP54Q96N23 3096 aa11.55□□□□□ -0.56
SH3D19-211ENST00000604030 NDUFAF8A1L188 74 aa11.52□□□□□ -0.57
SH3D19-211ENST00000604030 HTTP42858 3142 aa11.51□□□□□ -0.57
SH3D19-211ENST00000604030 IGSF10Q6WRI0 2623 aa11.51□□□□□ -0.57
SH3D19-211ENST00000604030 UBR5O95071 2799 aaPredicted RBP11.49□□□□□ -0.57
SH3D19-211ENST00000604030 KMT2BQ9UMN6 2715 aaPredicted RBP11.48□□□□□ -0.57
SH3D19-211ENST00000604030 MAP1AP78559 2803 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-211ENST00000604030 TNP1P09430 55 aa11.47□□□□□ -0.57
SH3D19-211ENST00000604030 A0A0C4DFX4 3053 aa11.47□□□□□ -0.57
SH3D19-211ENST00000604030 PP632Q6XCG6 107 aa11.45□□□□□ -0.58
SH3D19-211ENST00000604030 ITPR2Q14571 2701 aa11.38□□□□□ -0.59
SH3D19-211ENST00000604030 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
SH3D19-211ENST00000604030 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
SH3D19-211ENST00000604030 BAHCC1Q9P281 2608 aa11.28□□□□□ -0.6
SH3D19-211ENST00000604030 DSPP15924 2871 aaKnown RBP11.27□□□□□ -0.61
SH3D19-211ENST00000604030 ITPR1Q14643 2758 aa11.24□□□□□ -0.61
SH3D19-211ENST00000604030 RANBP2P49792 3224 aaKnown RBP11.23□□□□□ -0.61
SH3D19-211ENST00000604030 H0YAA0 97 aa11.21□□□□□ -0.62
SH3D19-211ENST00000604030 FRYQ5TBA9 3013 aa11.2□□□□□ -0.62
SH3D19-211ENST00000604030 WDFY4Q6ZS81 3184 aa11.16□□□□□ -0.62
SH3D19-211ENST00000604030 C10orf95Q9H7T3 257 aa11.16□□□□□ -0.62
SH3D19-211ENST00000604030 XP32Q5T750 250 aa11.16□□□□□ -0.62
SH3D19-211ENST00000604030 MKI67P46013 3256 aaKnown RBP11.13□□□□□ -0.63
SH3D19-211ENST00000604030 APCP25054 2843 aa11.11□□□□□ -0.63
SH3D19-211ENST00000604030 P0C880 135 aa11.1□□□□□ -0.63
SH3D19-211ENST00000604030 BRCA2P51587 3418 aa11.1□□□□□ -0.63
SH3D19-211ENST00000604030 LAMA2P24043 3122 aaKnown RBP11.07□□□□□ -0.64
SH3D19-211ENST00000604030 NIPBLQ6KC79 2804 aaeCLIP11.05□□□□□ -0.64
SH3D19-211ENST00000604030 LAMA3Q16787 3333 aa11.03□□□□□ -0.64
SH3D19-211ENST00000604030 TRIOO75962 3097 aa11.01□□□□□ -0.65
SH3D19-211ENST00000604030 TPRXLQ17RH7 258 aa11.01□□□□□ -0.65
SH3D19-211ENST00000604030 UTP20O75691 2785 aaKnown RBP10.99□□□□□ -0.65
SH3D19-211ENST00000604030 FLNCQ14315 2725 aa10.98□□□□□ -0.65
SH3D19-211ENST00000604030 KALRNO60229 2985 aa10.96□□□□□ -0.66
SH3D19-211ENST00000604030 KRTAP13-3Q3SY46 172 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms