RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 OBSCN-AS1Q96MR7 158 aa13.6□□□□□ -0.23
IRF3-228ENST00000601291 RBM3P98179 157 aaKnown RBP13.59□□□□□ -0.23
IRF3-228ENST00000601291 SMIM29Q86T20 159 aa13.59□□□□□ -0.23
IRF3-228ENST00000601291 KRTAP10-4P60372 401 aaPredicted RBP13.58□□□□□ -0.23
IRF3-228ENST00000601291 Q5VSD8 79 aa13.55□□□□□ -0.24
IRF3-228ENST00000601291 C14orf132Q9NPU4 83 aa13.55□□□□□ -0.24
IRF3-228ENST00000601291 DSCR8Q96T75 97 aa13.54□□□□□ -0.24
IRF3-228ENST00000601291 VPS13BQ7Z7G8 4022 aa13.54□□□□□ -0.24
IRF3-228ENST00000601291 ANAPC11Q9NYG5 84 aa13.51□□□□□ -0.25
IRF3-228ENST00000601291 RYR1P21817 5038 aa13.49□□□□□ -0.25
IRF3-228ENST00000601291 IGLV9-49A0A0B4J1Y8 123 aa13.49□□□□□ -0.25
IRF3-228ENST00000601291 PDE6GP18545 87 aa13.49□□□□□ -0.25
IRF3-228ENST00000601291 SRRM2Q9UQ35 2752 aaKnown RBP13.49□□□□□ -0.25
IRF3-228ENST00000601291 HSPG2P98160 4391 aa13.48□□□□□ -0.25
IRF3-228ENST00000601291 IGLV8-61A0A075B6I0 122 aa13.48□□□□□ -0.25
IRF3-228ENST00000601291 LOC110117498A0A087WWA1 95 aa13.48□□□□□ -0.25
IRF3-228ENST00000601291 TRBV7-4A0A0J9YYF1 115 aa13.48□□□□□ -0.25
IRF3-228ENST00000601291 Q8N1X5 172 aa13.48□□□□□ -0.25
IRF3-228ENST00000601291 FAT1Q14517 4588 aa13.47□□□□□ -0.25
IRF3-228ENST00000601291 J3QR89 54 aa13.47□□□□□ -0.25
IRF3-228ENST00000601291 FAM229BQ4G0N7 80 aa13.47□□□□□ -0.25
IRF3-228ENST00000601291 C9orf153Q5TBE3 101 aa13.47□□□□□ -0.25
IRF3-228ENST00000601291 KRTAP1-4P0C5Y4 121 aa13.45□□□□□ -0.26
IRF3-228ENST00000601291 C21orf62-AS1Q17RA5 79 aa13.45□□□□□ -0.26
IRF3-228ENST00000601291 Q6JHZ5 121 aa13.45□□□□□ -0.26
IRF3-228ENST00000601291 Q6ZQT0 140 aa13.45□□□□□ -0.26
IRF3-228ENST00000601291 Q8NBF4 154 aa13.43□□□□□ -0.26
IRF3-228ENST00000601291 MOBPQ13875 183 aa13.42□□□□□ -0.26
IRF3-228ENST00000601291 KIAA1109Q2LD37 5005 aa13.42□□□□□ -0.26
IRF3-228ENST00000601291 K7ERU9 68 aa13.41□□□□□ -0.26
IRF3-228ENST00000601291 CCKP06307 115 aa13.41□□□□□ -0.26
IRF3-228ENST00000601291 CRYGAP11844 174 aa13.41□□□□□ -0.26
IRF3-228ENST00000601291 IGFL1Q6UW32 110 aa13.41□□□□□ -0.26
IRF3-228ENST00000601291 VPS25Q9BRG1 176 aa13.39□□□□□ -0.27
IRF3-228ENST00000601291 A0A087X002 238 aa13.38□□□□□ -0.27
IRF3-228ENST00000601291 KRTAP17-1Q9BYP8 105 aa13.36□□□□□ -0.27
IRF3-228ENST00000601291 SSBP3-AS1Q7Z2R9 100 aa13.34□□□□□ -0.27
IRF3-228ENST00000601291 A0A0G2JQZ4 141 aa13.33□□□□□ -0.28
IRF3-228ENST00000601291 KRTAP13-2Q52LG2 175 aa13.33□□□□□ -0.28
IRF3-228ENST00000601291 FAM240AA0A1B0GVK7 77 aa13.32□□□□□ -0.28
IRF3-228ENST00000601291 A0A1W2PNM2 257 aa13.32□□□□□ -0.28
IRF3-228ENST00000601291 ACYP1P07311 99 aa13.32□□□□□ -0.28
IRF3-228ENST00000601291 TYMSOSQ8TAI1 123 aa13.28□□□□□ -0.28
IRF3-228ENST00000601291 A0A1B0GW54 56 aa13.28□□□□□ -0.28
IRF3-228ENST00000601291 Q6Q795 121 aa13.28□□□□□ -0.28
IRF3-228ENST00000601291 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
IRF3-228ENST00000601291 BIRC6Q9NR09 4857 aa13.25□□□□□ -0.29
IRF3-228ENST00000601291 PKHD1L1Q86WI1 4243 aa13.23□□□□□ -0.29
IRF3-228ENST00000601291 HRCT1Q6UXD1 115 aa13.22□□□□□ -0.29
IRF3-228ENST00000601291 CD164Q04900 197 aa13.21□□□□□ -0.29
IRF3-228ENST00000601291 LINC00846Q9NV44 126 aa13.21□□□□□ -0.29
IRF3-228ENST00000601291 TRBV7-7A0A0K0K1E9 115 aa13.2□□□□□ -0.3
IRF3-228ENST00000601291 A0A087WSZ3 146 aa13.19□□□□□ -0.3
IRF3-228ENST00000601291 UBL5Q9BZL1 73 aa13.18□□□□□ -0.3
IRF3-228ENST00000601291 C4orf48Q5BLP8 95 aa13.15□□□□□ -0.3
IRF3-228ENST00000601291 LINC00304Q8N9R0 145 aa13.13□□□□□ -0.31
IRF3-228ENST00000601291 SS18L2Q9UHA2 77 aa13.13□□□□□ -0.31
IRF3-228ENST00000601291 NREPQ16612 68 aa13.12□□□□□ -0.31
IRF3-228ENST00000601291 KRTAP4-5Q9BYR2 181 aa13.11□□□□□ -0.31
IRF3-228ENST00000601291 CDIP1Q9H305 208 aa13.11□□□□□ -0.31
IRF3-228ENST00000601291 SPAG11AQ6PDA7 123 aa13.11□□□□□ -0.31
IRF3-228ENST00000601291 Q6ZVQ6 151 aa13.11□□□□□ -0.31
IRF3-228ENST00000601291 SPINK1P00995 79 aa13.08□□□□□ -0.32
IRF3-228ENST00000601291 KRTAP10-8P60410 259 aa13.06□□□□□ -0.32
IRF3-228ENST00000601291 LIMD2Q9BT23 127 aa13.06□□□□□ -0.32
IRF3-228ENST00000601291 LINC00643Q86TS7 51 aa13.05□□□□□ -0.32
IRF3-228ENST00000601291 OXTP01178 125 aa13.03□□□□□ -0.32
IRF3-228ENST00000601291 RPS29P62273 56 aaKnown RBP13.03□□□□□ -0.32
IRF3-228ENST00000601291 HERC2O95714 4834 aa13.02□□□□□ -0.32
IRF3-228ENST00000601291 Q5XG85 94 aa13.02□□□□□ -0.33
IRF3-228ENST00000601291 ATP5EP2Q5VTU8 51 aa12.99□□□□□ -0.33
IRF3-228ENST00000601291 ASB16-AS1Q495Z4 193 aa12.98□□□□□ -0.33
IRF3-228ENST00000601291 BPY2O14599 106 aa12.97□□□□□ -0.33
IRF3-228ENST00000601291 LINC00472Q9H8W2 130 aa12.96□□□□□ -0.33
IRF3-228ENST00000601291 SIGMAR1Q99720 223 aa12.95□□□□□ -0.34
IRF3-228ENST00000601291 LRP1Q07954 4544 aaKnown RBP12.94□□□□□ -0.34
IRF3-228ENST00000601291 FLG2Q5D862 2391 aaPredicted RBP12.94□□□□□ -0.34
IRF3-228ENST00000601291 MT1HL1P0DM35 61 aa12.94□□□□□ -0.34
IRF3-228ENST00000601291 CXCL6P80162 114 aa12.94□□□□□ -0.34
IRF3-228ENST00000601291 FAT3Q8TDW7 4589 aa12.93□□□□□ -0.34
IRF3-228ENST00000601291 IGKV3D-7A0A0C4DH55 119 aa12.93□□□□□ -0.34
IRF3-228ENST00000601291 KRTAP29-1A8MX34 341 aaPredicted RBP12.93□□□□□ -0.34
IRF3-228ENST00000601291 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
IRF3-228ENST00000601291 Q96NJ1 140 aa12.93□□□□□ -0.34
IRF3-228ENST00000601291 J3KT08 172 aa12.92□□□□□ -0.34
IRF3-228ENST00000601291 MT-ATP8P03928 68 aa12.9□□□□□ -0.35
IRF3-228ENST00000601291 IGKV4-1P06312 121 aa12.88□□□□□ -0.35
IRF3-228ENST00000601291 C1orf195Q5TG92 126 aa12.86□□□□□ -0.35
IRF3-228ENST00000601291 TNXBP22105 4242 aa12.85□□□□□ -0.35
IRF3-228ENST00000601291 MYCBP2O75592 4640 aa12.85□□□□□ -0.35
IRF3-228ENST00000601291 DSCR10P59022 87 aa12.84□□□□□ -0.35
IRF3-228ENST00000601291 ABCA13Q86UQ4 5058 aa12.83□□□□□ -0.36
IRF3-228ENST00000601291 A8MWP4 228 aa12.81□□□□□ -0.36
IRF3-228ENST00000601291 HIST1H4AP62805 103 aaKnown RBP12.81□□□□□ -0.36
IRF3-228ENST00000601291 NDUFB1O75438 58 aa12.8□□□□□ -0.36
IRF3-228ENST00000601291 IMUPQ9GZP8 106 aa12.8□□□□□ -0.36
IRF3-228ENST00000601291 Q8N9L7 120 aa12.79□□□□□ -0.36
IRF3-228ENST00000601291 J3QL48 77 aa12.78□□□□□ -0.36
IRF3-228ENST00000601291 K7EQZ3 153 aa12.78□□□□□ -0.36
IRF3-228ENST00000601291 PRR15Q8IV56 129 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms