RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
PNKP-215ENST00000600910 PPDPFLQ8WWR9 84 aa12.11□□□□□ -0.47
PNKP-215ENST00000600910 GHRHP01286 108 aa12.11□□□□□ -0.47
PNKP-215ENST00000600910 SMIM29Q86T20 159 aa12.11□□□□□ -0.47
PNKP-215ENST00000600910 H3BMG7 143 aa12.1□□□□□ -0.47
PNKP-215ENST00000600910 IGLV9-49A0A0B4J1Y8 123 aa12.09□□□□□ -0.47
PNKP-215ENST00000600910 KRTAP13-2Q52LG2 175 aa12.09□□□□□ -0.47
PNKP-215ENST00000600910 LAMTOR3Q9UHA4 124 aa12.09□□□□□ -0.47
PNKP-215ENST00000600910 OXTP01178 125 aa12.08□□□□□ -0.48
PNKP-215ENST00000600910 C9JAW5 83 aa12.07□□□□□ -0.48
PNKP-215ENST00000600910 K7EP34 96 aa12.07□□□□□ -0.48
PNKP-215ENST00000600910 H3BQ85 93 aa12.06□□□□□ -0.48
PNKP-215ENST00000600910 TMEM256-PLSCR3K7ERE1 68 aa12.06□□□□□ -0.48
PNKP-215ENST00000600910 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
PNKP-215ENST00000600910 MOBPQ13875 183 aa12.04□□□□□ -0.48
PNKP-215ENST00000600910 PCLOQ9Y6V0 5065 aa12.04□□□□□ -0.48
PNKP-215ENST00000600910 KRTAP29-1A8MX34 341 aaPredicted RBP12.04□□□□□ -0.48
PNKP-215ENST00000600910 C9orf153Q5TBE3 101 aa12.04□□□□□ -0.48
PNKP-215ENST00000600910 TYMSOSQ8TAI1 123 aa12.04□□□□□ -0.48
PNKP-215ENST00000600910 F8WEM9 126 aa12.02□□□□□ -0.49
PNKP-215ENST00000600910 NDUFV3P56181 108 aaKnown RBP12.02□□□□□ -0.49
PNKP-215ENST00000600910 KRTAP10-8P60410 259 aa12.02□□□□□ -0.49
PNKP-215ENST00000600910 MTURNQ8N3F0 131 aa12.02□□□□□ -0.49
PNKP-215ENST00000600910 GTF2H5Q6ZYL4 71 aa12.01□□□□□ -0.49
PNKP-215ENST00000600910 MT1HL1P0DM35 61 aa12□□□□□ -0.49
PNKP-215ENST00000600910 TNXBP22105 4242 aa12□□□□□ -0.49
PNKP-215ENST00000600910 Q8NBF4 154 aa12□□□□□ -0.49
PNKP-215ENST00000600910 A0A1B0GV90 55 aa12□□□□□ -0.49
PNKP-215ENST00000600910 UBE2V1Q13404 147 aa12□□□□□ -0.49
PNKP-215ENST00000600910 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
PNKP-215ENST00000600910 ANKRD29Q8N6D5 301 aa11.97□□□□□ -0.49
PNKP-215ENST00000600910 H3BT86 120 aa11.96□□□□□ -0.5
PNKP-215ENST00000600910 A0A1B0GV72 72 aa11.95□□□□□ -0.5
PNKP-215ENST00000600910 IGLV8-61A0A075B6I0 122 aa11.94□□□□□ -0.5
PNKP-215ENST00000600910 J3QL48 77 aa11.93□□□□□ -0.5
PNKP-215ENST00000600910 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
PNKP-215ENST00000600910 A0A0G2JQZ4 141 aa11.92□□□□□ -0.5
PNKP-215ENST00000600910 SMCPP49901 116 aaPredicted RBP11.91□□□□□ -0.5
PNKP-215ENST00000600910 Q6JHZ5 121 aa11.89□□□□□ -0.51
PNKP-215ENST00000600910 IGFL1Q6UW32 110 aa11.89□□□□□ -0.51
PNKP-215ENST00000600910 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
PNKP-215ENST00000600910 RBM3P98179 157 aaKnown RBP11.87□□□□□ -0.51
PNKP-215ENST00000600910 F8W1H4 67 aa11.86□□□□□ -0.51
PNKP-215ENST00000600910 JMJD7-PLA2G4BH0Y9G9 81 aa11.86□□□□□ -0.51
PNKP-215ENST00000600910 C4orf48Q5BLP8 95 aa11.85□□□□□ -0.51
PNKP-215ENST00000600910 HRCT1Q6UXD1 115 aa11.84□□□□□ -0.51
PNKP-215ENST00000600910 SPAG11AQ6PDA7 123 aa11.83□□□□□ -0.52
PNKP-215ENST00000600910 OBSCN-AS1Q96MR7 158 aa11.82□□□□□ -0.52
PNKP-215ENST00000600910 DSCR8Q96T75 97 aa11.82□□□□□ -0.52
PNKP-215ENST00000600910 TRBV7-4A0A0J9YYF1 115 aa11.82□□□□□ -0.52
PNKP-215ENST00000600910 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
PNKP-215ENST00000600910 CD164Q04900 197 aa11.8□□□□□ -0.52
PNKP-215ENST00000600910 SPINK1P00995 79 aa11.79□□□□□ -0.52
PNKP-215ENST00000600910 C14orf132Q9NPU4 83 aa11.79□□□□□ -0.52
PNKP-215ENST00000600910 A0A1W2PNM2 257 aa11.76□□□□□ -0.53
PNKP-215ENST00000600910 CCKP06307 115 aa11.75□□□□□ -0.53
PNKP-215ENST00000600910 TEN1Q86WV5 123 aa11.75□□□□□ -0.53
PNKP-215ENST00000600910 LOC110117498A0A087WWA1 95 aa11.75□□□□□ -0.53
PNKP-215ENST00000600910 Q6Q795 121 aa11.75□□□□□ -0.53
PNKP-215ENST00000600910 Q6ZQT0 140 aa11.74□□□□□ -0.53
PNKP-215ENST00000600910 TRBV7-7A0A0K0K1E9 115 aa11.73□□□□□ -0.53
PNKP-215ENST00000600910 RPS29P62273 56 aaKnown RBP11.73□□□□□ -0.53
PNKP-215ENST00000600910 ETDBQ3ZM63 59 aa11.73□□□□□ -0.53
PNKP-215ENST00000600910 VPS25Q9BRG1 176 aa11.73□□□□□ -0.53
PNKP-215ENST00000600910 PDE6GP18545 87 aa11.71□□□□□ -0.53
PNKP-215ENST00000600910 LIMD2Q9BT23 127 aa11.69□□□□□ -0.54
PNKP-215ENST00000600910 A0A087WSZ3 146 aa11.67□□□□□ -0.54
PNKP-215ENST00000600910 Q5XG85 94 aa11.65□□□□□ -0.54
PNKP-215ENST00000600910 HERC1Q15751 4861 aa11.64□□□□□ -0.55
PNKP-215ENST00000600910 C21orf62-AS1Q17RA5 79 aa11.63□□□□□ -0.55
PNKP-215ENST00000600910 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
PNKP-215ENST00000600910 SS18L2Q9UHA2 77 aa11.6□□□□□ -0.55
PNKP-215ENST00000600910 A0A1B0GW54 56 aa11.58□□□□□ -0.56
PNKP-215ENST00000600910 ASB16-AS1Q495Z4 193 aa11.57□□□□□ -0.56
PNKP-215ENST00000600910 C1orf195Q5TG92 126 aa11.55□□□□□ -0.56
PNKP-215ENST00000600910 PRR4Q16378 134 aa11.51□□□□□ -0.57
PNKP-215ENST00000600910 Q96NJ1 140 aa11.5□□□□□ -0.57
PNKP-215ENST00000600910 FP248Q71RG6 208 aaPredicted RBP11.48□□□□□ -0.57
PNKP-215ENST00000600910 LINC00472Q9H8W2 130 aa11.47□□□□□ -0.57
PNKP-215ENST00000600910 NREPQ16612 68 aa11.46□□□□□ -0.58
PNKP-215ENST00000600910 DEFB116Q30KQ4 102 aa11.46□□□□□ -0.58
PNKP-215ENST00000600910 LINC00846Q9NV44 126 aa11.46□□□□□ -0.58
PNKP-215ENST00000600910 IGLV7-46A0A075B6I9 117 aa11.44□□□□□ -0.58
PNKP-215ENST00000600910 IGKV4-1P06312 121 aa11.41□□□□□ -0.58
PNKP-215ENST00000600910 Q6ZVQ6 151 aa11.4□□□□□ -0.58
PNKP-215ENST00000600910 SIGMAR1Q99720 223 aa11.39□□□□□ -0.59
PNKP-215ENST00000600910 UBL5Q9BZL1 73 aa11.39□□□□□ -0.59
PNKP-215ENST00000600910 FAM240AA0A1B0GVK7 77 aa11.38□□□□□ -0.59
PNKP-215ENST00000600910 ACYP1P07311 99 aa11.38□□□□□ -0.59
PNKP-215ENST00000600910 HMCN2Q8NDA2 5059 aa11.38□□□□□ -0.59
PNKP-215ENST00000600910 J3KT08 172 aa11.35□□□□□ -0.59
PNKP-215ENST00000600910 J3QR89 54 aa11.35□□□□□ -0.59
PNKP-215ENST00000600910 LPAP08519 4548 aa11.31□□□□□ -0.6
PNKP-215ENST00000600910 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
PNKP-215ENST00000600910 KRTAP13-3Q3SY46 172 aa11.31□□□□□ -0.6
PNKP-215ENST00000600910 BPY2O14599 106 aa11.31□□□□□ -0.6
PNKP-215ENST00000600910 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
PNKP-215ENST00000600910 A8MWP4 228 aa11.27□□□□□ -0.61
PNKP-215ENST00000600910 DSCR10P59022 87 aa11.27□□□□□ -0.61
PNKP-215ENST00000600910 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms