RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
SRRM1-223ENST00000600523 A0A1B0GX51 115 aa7.52□□□□□ -1.21
SRRM1-223ENST00000600523 K7ERJ3 54 aa7.52□□□□□ -1.21
SRRM1-223ENST00000600523 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
SRRM1-223ENST00000600523 Q8N377 158 aa7.51□□□□□ -1.21
SRRM1-223ENST00000600523 SNHG12Q9BXW3 62 aa7.51□□□□□ -1.21
SRRM1-223ENST00000600523 TRIAP1O43715 76 aa7.5□□□□□ -1.21
SRRM1-223ENST00000600523 DNAL4O96015 105 aa7.5□□□□□ -1.21
SRRM1-223ENST00000600523 LINC01547P58512 204 aaPredicted RBP7.5□□□□□ -1.21
SRRM1-223ENST00000600523 SCGB1C2P0DMR2 95 aa7.49□□□□□ -1.21
SRRM1-223ENST00000600523 LIMD2Q9BT23 127 aa7.49□□□□□ -1.21
SRRM1-223ENST00000600523 SMIM29Q86T20 159 aa7.48□□□□□ -1.21
SRRM1-223ENST00000600523 H3BQ85 93 aa7.47□□□□□ -1.21
SRRM1-223ENST00000600523 CD164Q04900 197 aa7.47□□□□□ -1.21
SRRM1-223ENST00000600523 Q6JHZ5 121 aa7.47□□□□□ -1.21
SRRM1-223ENST00000600523 RETNLBQ9BQ08 111 aa7.47□□□□□ -1.21
SRRM1-223ENST00000600523 HRCT1Q6UXD1 115 aa7.46□□□□□ -1.22
SRRM1-223ENST00000600523 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
SRRM1-223ENST00000600523 FAM218AQ96MZ4 157 aa7.45□□□□□ -1.22
SRRM1-223ENST00000600523 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
SRRM1-223ENST00000600523 FABP2P12104 132 aa7.44□□□□□ -1.22
SRRM1-223ENST00000600523 CLEC2BQ92478 149 aa7.44□□□□□ -1.22
SRRM1-223ENST00000600523 C21orf62-AS1Q17RA5 79 aa7.43□□□□□ -1.22
SRRM1-223ENST00000600523 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
SRRM1-223ENST00000600523 BATFQ16520 125 aa7.42□□□□□ -1.22
SRRM1-223ENST00000600523 NDUFV3P56181 108 aaKnown RBP7.41□□□□□ -1.22
SRRM1-223ENST00000600523 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
SRRM1-223ENST00000600523 HMCN2Q8NDA2 5059 aa7.41□□□□□ -1.22
SRRM1-223ENST00000600523 IGLV8-61A0A075B6I0 122 aa7.4□□□□□ -1.22
SRRM1-223ENST00000600523 TMEM256-PLSCR3K7ERE1 68 aa7.4□□□□□ -1.22
SRRM1-223ENST00000600523 TCL1BO95988 128 aa7.4□□□□□ -1.22
SRRM1-223ENST00000600523 TRACP01848 142 aa7.39□□□□□ -1.23
SRRM1-223ENST00000600523 H3BMG7 143 aa7.38□□□□□ -1.23
SRRM1-223ENST00000600523 CDIP1Q9H305 208 aa7.38□□□□□ -1.23
SRRM1-223ENST00000600523 LST1O00453 97 aa7.37□□□□□ -1.23
SRRM1-223ENST00000600523 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
SRRM1-223ENST00000600523 IGFL1Q6UW32 110 aa7.37□□□□□ -1.23
SRRM1-223ENST00000600523 H3BUT2 72 aa7.36□□□□□ -1.23
SRRM1-223ENST00000600523 ATXN8Q156A1 80 aa7.36□□□□□ -1.23
SRRM1-223ENST00000600523 Q5XG85 94 aa7.36□□□□□ -1.23
SRRM1-223ENST00000600523 A0A0G2JQZ4 141 aa7.35□□□□□ -1.23
SRRM1-223ENST00000600523 TRBV7-7A0A0K0K1E9 115 aa7.33□□□□□ -1.24
SRRM1-223ENST00000600523 UBE2V1Q13404 147 aa7.33□□□□□ -1.24
SRRM1-223ENST00000600523 SS18L2Q9UHA2 77 aa7.33□□□□□ -1.24
SRRM1-223ENST00000600523 TRBV20-1A0A075B6N2 111 aa7.32□□□□□ -1.24
SRRM1-223ENST00000600523 TEN1Q86WV5 123 aa7.32□□□□□ -1.24
SRRM1-223ENST00000600523 ANKRD29Q8N6D5 301 aa7.32□□□□□ -1.24
SRRM1-223ENST00000600523 NAA38Q9BRA0 125 aaKnown RBP7.32□□□□□ -1.24
SRRM1-223ENST00000600523 BAALC-AS2P0C853 105 aa7.3□□□□□ -1.24
SRRM1-223ENST00000600523 Q6Q795 121 aa7.3□□□□□ -1.24
SRRM1-223ENST00000600523 C9orf118A6NHY6 69 aa7.29□□□□□ -1.24
SRRM1-223ENST00000600523 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
SRRM1-223ENST00000600523 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
SRRM1-223ENST00000600523 A0A1B0GV72 72 aa7.27□□□□□ -1.25
SRRM1-223ENST00000600523 RBM3P98179 157 aaKnown RBP7.27□□□□□ -1.25
SRRM1-223ENST00000600523 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
SRRM1-223ENST00000600523 C1orf195Q5TG92 126 aa7.27□□□□□ -1.25
SRRM1-223ENST00000600523 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
SRRM1-223ENST00000600523 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
SRRM1-223ENST00000600523 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
SRRM1-223ENST00000600523 A0A087WSZ3 146 aa7.24□□□□□ -1.25
SRRM1-223ENST00000600523 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
SRRM1-223ENST00000600523 A0A1W2PPM0 123 aa7.24□□□□□ -1.25
SRRM1-223ENST00000600523 JMJD7-PLA2G4BH0Y9G9 81 aa7.24□□□□□ -1.25
SRRM1-223ENST00000600523 TAX1BP3O14907 124 aa7.24□□□□□ -1.25
SRRM1-223ENST00000600523 LRP2P98164 4655 aa7.23□□□□□ -1.25
SRRM1-223ENST00000600523 C9JAW5 83 aa7.23□□□□□ -1.25
SRRM1-223ENST00000600523 CCKP06307 115 aa7.23□□□□□ -1.25
SRRM1-223ENST00000600523 LPAP08519 4548 aa7.23□□□□□ -1.25
SRRM1-223ENST00000600523 PCP4L1A6NKN8 68 aa7.22□□□□□ -1.25
SRRM1-223ENST00000600523 VPS25Q9BRG1 176 aa7.22□□□□□ -1.25
SRRM1-223ENST00000600523 A0A1W2PNM2 257 aa7.21□□□□□ -1.26
SRRM1-223ENST00000600523 PDE6GP18545 87 aa7.21□□□□□ -1.26
SRRM1-223ENST00000600523 UBR4Q5T4S7 5183 aa7.2□□□□□ -1.26
SRRM1-223ENST00000600523 C9orf92A6NGG3 77 aa7.2□□□□□ -1.26
SRRM1-223ENST00000600523 SVIPQ8NHG7 77 aa7.2□□□□□ -1.26
SRRM1-223ENST00000600523 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
SRRM1-223ENST00000600523 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
SRRM1-223ENST00000600523 H3BT86 120 aa7.18□□□□□ -1.26
SRRM1-223ENST00000600523 XP32Q5T750 250 aa7.16□□□□□ -1.26
SRRM1-223ENST00000600523 A0A1B0GW54 56 aa7.15□□□□□ -1.26
SRRM1-223ENST00000600523 SIGMAR1Q99720 223 aa7.15□□□□□ -1.26
SRRM1-223ENST00000600523 LOC110117498A0A087WWA1 95 aa7.14□□□□□ -1.27
SRRM1-223ENST00000600523 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
SRRM1-223ENST00000600523 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
SRRM1-223ENST00000600523 IGKV4-1P06312 121 aa7.11□□□□□ -1.27
SRRM1-223ENST00000600523 Q6ZQT0 140 aa7.11□□□□□ -1.27
SRRM1-223ENST00000600523 GTF2H5Q6ZYL4 71 aa7.11□□□□□ -1.27
SRRM1-223ENST00000600523 MTURNQ8N3F0 131 aa7.1□□□□□ -1.27
SRRM1-223ENST00000600523 OBSCN-AS1Q96MR7 158 aa7.1□□□□□ -1.27
SRRM1-223ENST00000600523 J3KT08 172 aa7.08□□□□□ -1.28
SRRM1-223ENST00000600523 K7EP34 96 aa7.08□□□□□ -1.28
SRRM1-223ENST00000600523 Q96NJ1 140 aa7.08□□□□□ -1.28
SRRM1-223ENST00000600523 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
SRRM1-223ENST00000600523 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
SRRM1-223ENST00000600523 DEFB116Q30KQ4 102 aa7.05□□□□□ -1.28
SRRM1-223ENST00000600523 NDUFB1O75438 58 aa7.04□□□□□ -1.28
SRRM1-223ENST00000600523 LINC00313P59037 77 aa7.04□□□□□ -1.28
SRRM1-223ENST00000600523 NREPQ16612 68 aa7.03□□□□□ -1.28
SRRM1-223ENST00000600523 PCOTHQ58A44 107 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms