RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 IGLV9-49A0A0B4J1Y8 123 aa11.73□□□□□ -0.53
SHKBP1-222ENST00000600320 LST1O00453 97 aa11.71□□□□□ -0.53
SHKBP1-222ENST00000600320 SNCGO76070 127 aa11.71□□□□□ -0.53
SHKBP1-222ENST00000600320 MOBPQ13875 183 aa11.71□□□□□ -0.53
SHKBP1-222ENST00000600320 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
SHKBP1-222ENST00000600320 LAMTOR3Q9UHA4 124 aa11.7□□□□□ -0.54
SHKBP1-222ENST00000600320 TCL1BO95988 128 aa11.69□□□□□ -0.54
SHKBP1-222ENST00000600320 C9orf153Q5TBE3 101 aa11.68□□□□□ -0.54
SHKBP1-222ENST00000600320 TRACP01848 142 aa11.67□□□□□ -0.54
SHKBP1-222ENST00000600320 DNAL4O96015 105 aa11.66□□□□□ -0.54
SHKBP1-222ENST00000600320 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
SHKBP1-222ENST00000600320 Q8NBF4 154 aa11.66□□□□□ -0.54
SHKBP1-222ENST00000600320 A0A1W2PPM0 123 aa11.65□□□□□ -0.54
SHKBP1-222ENST00000600320 PPDPFLQ8WWR9 84 aa11.65□□□□□ -0.54
SHKBP1-222ENST00000600320 LYRM7Q5U5X0 104 aa11.64□□□□□ -0.55
SHKBP1-222ENST00000600320 SSBP3-AS1Q7Z2R9 100 aa11.64□□□□□ -0.55
SHKBP1-222ENST00000600320 ATXN8Q156A1 80 aa11.63□□□□□ -0.55
SHKBP1-222ENST00000600320 ORMDL1Q9P0S3 153 aa11.63□□□□□ -0.55
SHKBP1-222ENST00000600320 LINC00304Q8N9R0 145 aa11.62□□□□□ -0.55
SHKBP1-222ENST00000600320 FABP2P12104 132 aa11.6□□□□□ -0.55
SHKBP1-222ENST00000600320 A0A0G2JQZ4 141 aa11.59□□□□□ -0.55
SHKBP1-222ENST00000600320 TRBV20-1A0A075B6N2 111 aa11.58□□□□□ -0.56
SHKBP1-222ENST00000600320 F8WEM9 126 aa11.58□□□□□ -0.56
SHKBP1-222ENST00000600320 NDUFV3P56181 108 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-222ENST00000600320 GHRHP01286 108 aa11.57□□□□□ -0.56
SHKBP1-222ENST00000600320 IGLV8-61A0A075B6I0 122 aa11.55□□□□□ -0.56
SHKBP1-222ENST00000600320 H3BQ85 93 aa11.54□□□□□ -0.56
SHKBP1-222ENST00000600320 TMEM256-PLSCR3K7ERE1 68 aa11.54□□□□□ -0.56
SHKBP1-222ENST00000600320 BAALC-AS2P0C853 105 aa11.54□□□□□ -0.56
SHKBP1-222ENST00000600320 SPCS1Q9Y6A9 102 aa11.54□□□□□ -0.56
SHKBP1-222ENST00000600320 SPAG11AQ6PDA7 123 aa11.53□□□□□ -0.56
SHKBP1-222ENST00000600320 C4orf48Q5BLP8 95 aa11.52□□□□□ -0.57
SHKBP1-222ENST00000600320 C9JAW5 83 aa11.51□□□□□ -0.57
SHKBP1-222ENST00000600320 UBE2V1Q13404 147 aa11.51□□□□□ -0.57
SHKBP1-222ENST00000600320 IGFL1Q6UW32 110 aa11.51□□□□□ -0.57
SHKBP1-222ENST00000600320 HRCT1Q6UXD1 115 aa11.51□□□□□ -0.57
SHKBP1-222ENST00000600320 H3BMG7 143 aa11.5□□□□□ -0.57
SHKBP1-222ENST00000600320 A0A1B0GV72 72 aa11.49□□□□□ -0.57
SHKBP1-222ENST00000600320 Q6JHZ5 121 aa11.48□□□□□ -0.57
SHKBP1-222ENST00000600320 MTURNQ8N3F0 131 aa11.48□□□□□ -0.57
SHKBP1-222ENST00000600320 SPINK1P00995 79 aa11.47□□□□□ -0.57
SHKBP1-222ENST00000600320 K7EP34 96 aa11.46□□□□□ -0.57
SHKBP1-222ENST00000600320 ANKRD29Q8N6D5 301 aa11.46□□□□□ -0.57
SHKBP1-222ENST00000600320 CD164Q04900 197 aa11.44□□□□□ -0.58
SHKBP1-222ENST00000600320 HMCN2Q8NDA2 5059 aa11.42□□□□□ -0.58
SHKBP1-222ENST00000600320 RPS29P62273 56 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-222ENST00000600320 H3BT86 120 aa11.4□□□□□ -0.58
SHKBP1-222ENST00000600320 RETNLBQ9BQ08 111 aa11.4□□□□□ -0.58
SHKBP1-222ENST00000600320 SMCPP49901 116 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-222ENST00000600320 TRBV7-7A0A0K0K1E9 115 aa11.37□□□□□ -0.59
SHKBP1-222ENST00000600320 A0A1W2PNM2 257 aa11.37□□□□□ -0.59
SHKBP1-222ENST00000600320 RBM3P98179 157 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-222ENST00000600320 PRO0461Q9UI25 63 aa11.37□□□□□ -0.59
SHKBP1-222ENST00000600320 TRBV7-4A0A0J9YYF1 115 aa11.36□□□□□ -0.59
SHKBP1-222ENST00000600320 GTF2H5Q6ZYL4 71 aa11.35□□□□□ -0.59
SHKBP1-222ENST00000600320 Q6Q795 121 aa11.34□□□□□ -0.59
SHKBP1-222ENST00000600320 LIMD2Q9BT23 127 aa11.34□□□□□ -0.59
SHKBP1-222ENST00000600320 JMJD7-PLA2G4BH0Y9G9 81 aa11.33□□□□□ -0.6
SHKBP1-222ENST00000600320 TEN1Q86WV5 123 aa11.33□□□□□ -0.6
SHKBP1-222ENST00000600320 OBSCN-AS1Q96MR7 158 aa11.33□□□□□ -0.6
SHKBP1-222ENST00000600320 Q5XG85 94 aa11.32□□□□□ -0.6
SHKBP1-222ENST00000600320 PRR4Q16378 134 aa11.31□□□□□ -0.6
SHKBP1-222ENST00000600320 DSCR8Q96T75 97 aa11.31□□□□□ -0.6
SHKBP1-222ENST00000600320 CCKP06307 115 aa11.29□□□□□ -0.6
SHKBP1-222ENST00000600320 C14orf132Q9NPU4 83 aa11.29□□□□□ -0.6
SHKBP1-222ENST00000600320 UBR4Q5T4S7 5183 aa11.29□□□□□ -0.6
SHKBP1-222ENST00000600320 A0A1B0GV90 55 aa11.28□□□□□ -0.6
SHKBP1-222ENST00000600320 A0A087WSZ3 146 aa11.26□□□□□ -0.61
SHKBP1-222ENST00000600320 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
SHKBP1-222ENST00000600320 Q6ZQT0 140 aa11.26□□□□□ -0.61
SHKBP1-222ENST00000600320 VPS25Q9BRG1 176 aa11.26□□□□□ -0.61
SHKBP1-222ENST00000600320 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
SHKBP1-222ENST00000600320 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
SHKBP1-222ENST00000600320 IGLV7-46A0A075B6I9 117 aa11.22□□□□□ -0.61
SHKBP1-222ENST00000600320 FP248Q71RG6 208 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-222ENST00000600320 F8W1H4 67 aa11.21□□□□□ -0.61
SHKBP1-222ENST00000600320 PDE6GP18545 87 aa11.19□□□□□ -0.62
SHKBP1-222ENST00000600320 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
SHKBP1-222ENST00000600320 ETDBQ3ZM63 59 aa11.14□□□□□ -0.63
SHKBP1-222ENST00000600320 Q96NJ1 140 aa11.14□□□□□ -0.63
SHKBP1-222ENST00000600320 LPAP08519 4548 aa11.11□□□□□ -0.63
SHKBP1-222ENST00000600320 KRTAP13-3Q3SY46 172 aa11.1□□□□□ -0.63
SHKBP1-222ENST00000600320 TPRXLQ17RH7 258 aa11.09□□□□□ -0.63
SHKBP1-222ENST00000600320 A0A1B0GW54 56 aa11.08□□□□□ -0.64
SHKBP1-222ENST00000600320 C21orf62-AS1Q17RA5 79 aa11.08□□□□□ -0.64
SHKBP1-222ENST00000600320 LINC00472Q9H8W2 130 aa11.08□□□□□ -0.64
SHKBP1-222ENST00000600320 DEFB116Q30KQ4 102 aa11.06□□□□□ -0.64
SHKBP1-222ENST00000600320 LRP2P98164 4655 aa11.03□□□□□ -0.64
SHKBP1-222ENST00000600320 IGKV4-1P06312 121 aa11.02□□□□□ -0.65
SHKBP1-222ENST00000600320 C9orf92A6NGG3 77 aa11.01□□□□□ -0.65
SHKBP1-222ENST00000600320 SIGMAR1Q99720 223 aa11□□□□□ -0.65
SHKBP1-222ENST00000600320 CDIP1Q9H305 208 aa10.99□□□□□ -0.65
SHKBP1-222ENST00000600320 NREPQ16612 68 aa10.97□□□□□ -0.65
SHKBP1-222ENST00000600320 LINC00846Q9NV44 126 aa10.95□□□□□ -0.66
SHKBP1-222ENST00000600320 XP32Q5T750 250 aa10.93□□□□□ -0.66
SHKBP1-222ENST00000600320 Q6ZVQ6 151 aa10.93□□□□□ -0.66
SHKBP1-222ENST00000600320 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
SHKBP1-222ENST00000600320 J3KT08 172 aa10.91□□□□□ -0.66
SHKBP1-222ENST00000600320 DSCR10P59022 87 aa10.89□□□□□ -0.67
SHKBP1-222ENST00000600320 NOTCH2NLQ7Z3S9 236 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms