RNA–Protein interactions for RNA: ENST00000594617.7

PDE4C-207, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE4C, Length 4,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-207ENST00000594617 SPINT4Q6UDR6 99 aa9.69□□□□□ -0.86
PDE4C-207ENST00000594617 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
PDE4C-207ENST00000594617 VPS13AQ96RL7 3174 aa9.68□□□□□ -0.86
PDE4C-207ENST00000594617 TNP2Q05952 138 aa9.68□□□□□ -0.86
PDE4C-207ENST00000594617 Q5VV11 94 aa9.67□□□□□ -0.86
PDE4C-207ENST00000594617 FRYQ5TBA9 3013 aa9.65□□□□□ -0.86
PDE4C-207ENST00000594617 HRES1P13985 223 aa9.65□□□□□ -0.86
PDE4C-207ENST00000594617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.63□□□□□ -0.87
PDE4C-207ENST00000594617 PRUNE2Q8WUY3 3088 aa9.63□□□□□ -0.87
PDE4C-207ENST00000594617 DSPP15924 2871 aaKnown RBP9.62□□□□□ -0.87
PDE4C-207ENST00000594617 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
PDE4C-207ENST00000594617 MAP1AP78559 2803 aaPredicted RBP9.61□□□□□ -0.87
PDE4C-207ENST00000594617 Q8N1X5 172 aa9.61□□□□□ -0.87
PDE4C-207ENST00000594617 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
PDE4C-207ENST00000594617 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
PDE4C-207ENST00000594617 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
PDE4C-207ENST00000594617 NBEAQ8NFP9 2946 aa9.54□□□□□ -0.88
PDE4C-207ENST00000594617 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
PDE4C-207ENST00000594617 XIRP2A4UGR9 3374 aa9.54□□□□□ -0.88
PDE4C-207ENST00000594617 NBEAL2Q6ZNJ1 2754 aa9.53□□□□□ -0.88
PDE4C-207ENST00000594617 ZCCHC13Q8WW36 166 aaKnown RBP9.53□□□□□ -0.88
PDE4C-207ENST00000594617 TEX15Q9BXT5 2789 aa9.53□□□□□ -0.88
PDE4C-207ENST00000594617 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
PDE4C-207ENST00000594617 NBEAL1Q6ZS30 2694 aa9.49□□□□□ -0.89
PDE4C-207ENST00000594617 NOTCH1P46531 2555 aa9.49□□□□□ -0.89
PDE4C-207ENST00000594617 SPINK7P58062 85 aa9.47□□□□□ -0.89
PDE4C-207ENST00000594617 Q5W150 140 aa9.47□□□□□ -0.89
PDE4C-207ENST00000594617 A0A1B0GU33 70 aa9.47□□□□□ -0.89
PDE4C-207ENST00000594617 LINC01554Q52M75 96 aa9.47□□□□□ -0.89
PDE4C-207ENST00000594617 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.89
PDE4C-207ENST00000594617 SETXQ7Z333 2677 aaKnown RBP9.46□□□□□ -0.9
PDE4C-207ENST00000594617 SMR3BP02814 79 aaPredicted RBP9.44□□□□□ -0.9
PDE4C-207ENST00000594617 Q6ZR54 194 aa9.43□□□□□ -0.9
PDE4C-207ENST00000594617 STAB1Q9NY15 2570 aa9.43□□□□□ -0.9
PDE4C-207ENST00000594617 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
PDE4C-207ENST00000594617 TEP1Q99973 2627 aaKnown RBP9.42□□□□□ -0.9
PDE4C-207ENST00000594617 KALRNO60229 2985 aa9.42□□□□□ -0.9
PDE4C-207ENST00000594617 IGSF10Q6WRI0 2623 aa9.4□□□□□ -0.9
PDE4C-207ENST00000594617 LCE6AA0A183 80 aa9.4□□□□□ -0.9
PDE4C-207ENST00000594617 LAMA1P25391 3075 aa9.4□□□□□ -0.91
PDE4C-207ENST00000594617 UBR5O95071 2799 aaPredicted RBP9.39□□□□□ -0.91
PDE4C-207ENST00000594617 PRAC1Q96KF2 57 aa9.39□□□□□ -0.91
PDE4C-207ENST00000594617 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
PDE4C-207ENST00000594617 LINC00483Q53H64 154 aa9.39□□□□□ -0.91
PDE4C-207ENST00000594617 A0A0D9SG42 100 aa9.38□□□□□ -0.91
PDE4C-207ENST00000594617 FREM2Q5SZK8 3169 aa9.37□□□□□ -0.91
PDE4C-207ENST00000594617 DMAC1Q96GE9 116 aa9.37□□□□□ -0.91
PDE4C-207ENST00000594617 CELSR3Q9NYQ7 3312 aa9.36□□□□□ -0.91
PDE4C-207ENST00000594617 VCANP13611 3396 aa9.32□□□□□ -0.92
PDE4C-207ENST00000594617 ADGRG4Q8IZF6 3080 aa9.31□□□□□ -0.92
PDE4C-207ENST00000594617 ASB16-AS1Q495Z4 193 aa9.28□□□□□ -0.92
PDE4C-207ENST00000594617 FLNCQ14315 2725 aa9.27□□□□□ -0.93
PDE4C-207ENST00000594617 CSAG1Q6PB30 78 aa9.26□□□□□ -0.93
PDE4C-207ENST00000594617 ITPR1Q14643 2758 aa9.24□□□□□ -0.93
PDE4C-207ENST00000594617 ATMQ13315 3056 aa9.24□□□□□ -0.93
PDE4C-207ENST00000594617 DNAH14Q0VDD8 3507 aa9.23□□□□□ -0.93
PDE4C-207ENST00000594617 PANO1I0J062 215 aa9.22□□□□□ -0.93
PDE4C-207ENST00000594617 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.93
PDE4C-207ENST00000594617 SZT2Q5T011 3432 aa9.21□□□□□ -0.94
PDE4C-207ENST00000594617 COX6B2Q6YFQ2 88 aa9.19□□□□□ -0.94
PDE4C-207ENST00000594617 FRYLO94915 3013 aa9.18□□□□□ -0.94
PDE4C-207ENST00000594617 NSD1Q96L73 2696 aaPredicted RBP9.17□□□□□ -0.94
PDE4C-207ENST00000594617 BOD1L1Q8NFC6 3051 aa9.16□□□□□ -0.94
PDE4C-207ENST00000594617 LRBAP50851 2863 aa9.15□□□□□ -0.94
PDE4C-207ENST00000594617 STAB2Q8WWQ8 2551 aa9.15□□□□□ -0.94
PDE4C-207ENST00000594617 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.94
PDE4C-207ENST00000594617 BAHCC1Q9P281 2608 aa9.15□□□□□ -0.94
PDE4C-207ENST00000594617 J3QL48 77 aa9.14□□□□□ -0.95
PDE4C-207ENST00000594617 A0A087X002 238 aa9.13□□□□□ -0.95
PDE4C-207ENST00000594617 A6NN06 94 aa9.13□□□□□ -0.95
PDE4C-207ENST00000594617 TACC2O95359 2948 aa9.13□□□□□ -0.95
PDE4C-207ENST00000594617 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
PDE4C-207ENST00000594617 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
PDE4C-207ENST00000594617 COL12A1Q99715 3063 aa9.12□□□□□ -0.95
PDE4C-207ENST00000594617 H3BS24 57 aa9.11□□□□□ -0.95
PDE4C-207ENST00000594617 Q6ZSA8 131 aa9.11□□□□□ -0.95
PDE4C-207ENST00000594617 DMBT1Q9UGM3 2413 aaPredicted RBP9.11□□□□□ -0.95
PDE4C-207ENST00000594617 DMXL2Q8TDJ6 3036 aa9.09□□□□□ -0.95
PDE4C-207ENST00000594617 ITPR2Q14571 2701 aa9.08□□□□□ -0.96
PDE4C-207ENST00000594617 LUZP6Q538Z0 58 aa9.08□□□□□ -0.96
PDE4C-207ENST00000594617 RPL37P61927 97 aaKnown RBP9.08□□□□□ -0.96
PDE4C-207ENST00000594617 H1FX-AS1Q4G0G2 97 aa9.08□□□□□ -0.96
PDE4C-207ENST00000594617 S4R3F8 94 aa9.08□□□□□ -0.96
PDE4C-207ENST00000594617 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
PDE4C-207ENST00000594617 KRTAP10-1P60331 282 aa9.06□□□□□ -0.96
PDE4C-207ENST00000594617 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
PDE4C-207ENST00000594617 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
PDE4C-207ENST00000594617 ROMO1P60602 79 aa9.03□□□□□ -0.96
PDE4C-207ENST00000594617 Q6ZRN7 208 aaPredicted RBP9.03□□□□□ -0.96
PDE4C-207ENST00000594617 UTP20O75691 2785 aaKnown RBP9.03□□□□□ -0.96
PDE4C-207ENST00000594617 NIPBLQ6KC79 2804 aaeCLIP9.02□□□□□ -0.96
PDE4C-207ENST00000594617 APCP25054 2843 aa9.02□□□□□ -0.97
PDE4C-207ENST00000594617 FLG2Q5D862 2391 aaPredicted RBP9.02□□□□□ -0.97
PDE4C-207ENST00000594617 COL6A3P12111 3177 aa9□□□□□ -0.97
PDE4C-207ENST00000594617 ZZEF1O43149 2961 aa8.98□□□□□ -0.97
PDE4C-207ENST00000594617 A8MU10 97 aa8.96□□□□□ -0.97
PDE4C-207ENST00000594617 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.97
PDE4C-207ENST00000594617 ZANQ9Y493 2812 aa8.94□□□□□ -0.98
PDE4C-207ENST00000594617 KMT2BQ9UMN6 2715 aaPredicted RBP8.94□□□□□ -0.98
PDE4C-207ENST00000594617 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms