RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 M0R143 59 aa11.99□□□□□ -0.49
CIRBP-229ENST00000590704 A0A1B0GX51 115 aa11.98□□□□□ -0.49
CIRBP-229ENST00000590704 SPINK1P00995 79 aa11.98□□□□□ -0.49
CIRBP-229ENST00000590704 RETNLBQ9BQ08 111 aa11.98□□□□□ -0.49
CIRBP-229ENST00000590704 UBR4Q5T4S7 5183 aa11.97□□□□□ -0.49
CIRBP-229ENST00000590704 IGLV8-61A0A075B6I0 122 aa11.95□□□□□ -0.5
CIRBP-229ENST00000590704 PSMB2P49721 201 aa11.95□□□□□ -0.5
CIRBP-229ENST00000590704 RPS29P62273 56 aaKnown RBP11.95□□□□□ -0.5
CIRBP-229ENST00000590704 C4orf48Q5BLP8 95 aa11.95□□□□□ -0.5
CIRBP-229ENST00000590704 PPDPFLQ8WWR9 84 aa11.94□□□□□ -0.5
CIRBP-229ENST00000590704 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
CIRBP-229ENST00000590704 PRR4Q16378 134 aa11.9□□□□□ -0.5
CIRBP-229ENST00000590704 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
CIRBP-229ENST00000590704 COX6CP09669 75 aa11.89□□□□□ -0.51
CIRBP-229ENST00000590704 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
CIRBP-229ENST00000590704 LST1O00453 97 aa11.88□□□□□ -0.51
CIRBP-229ENST00000590704 CD164Q04900 197 aa11.88□□□□□ -0.51
CIRBP-229ENST00000590704 IGFL1Q6UW32 110 aa11.87□□□□□ -0.51
CIRBP-229ENST00000590704 BATFQ16520 125 aa11.85□□□□□ -0.51
CIRBP-229ENST00000590704 SNCGO76070 127 aa11.84□□□□□ -0.51
CIRBP-229ENST00000590704 NDUFV3P56181 108 aaKnown RBP11.84□□□□□ -0.51
CIRBP-229ENST00000590704 SNHG12Q9BXW3 62 aa11.84□□□□□ -0.51
CIRBP-229ENST00000590704 H3BUT2 72 aa11.83□□□□□ -0.52
CIRBP-229ENST00000590704 TRACP01848 142 aa11.83□□□□□ -0.52
CIRBP-229ENST00000590704 SCGB1C2P0DMR2 95 aa11.83□□□□□ -0.52
CIRBP-229ENST00000590704 TAX1BP3O14907 124 aa11.83□□□□□ -0.52
CIRBP-229ENST00000590704 TCL1BO95988 128 aa11.82□□□□□ -0.52
CIRBP-229ENST00000590704 Q5XG85 94 aa11.82□□□□□ -0.52
CIRBP-229ENST00000590704 F8WEM9 126 aa11.8□□□□□ -0.52
CIRBP-229ENST00000590704 Q6JHZ5 121 aa11.8□□□□□ -0.52
CIRBP-229ENST00000590704 ORMDL1Q9P0S3 153 aa11.8□□□□□ -0.52
CIRBP-229ENST00000590704 IGLV7-46A0A075B6I9 117 aa11.79□□□□□ -0.52
CIRBP-229ENST00000590704 PCP4L1A6NKN8 68 aa11.78□□□□□ -0.52
CIRBP-229ENST00000590704 FABP2P12104 132 aa11.78□□□□□ -0.52
CIRBP-229ENST00000590704 FP248Q71RG6 208 aaPredicted RBP11.78□□□□□ -0.52
CIRBP-229ENST00000590704 DNAL4O96015 105 aa11.76□□□□□ -0.53
CIRBP-229ENST00000590704 C9orf118A6NHY6 69 aa11.76□□□□□ -0.53
CIRBP-229ENST00000590704 H3BMG7 143 aa11.76□□□□□ -0.53
CIRBP-229ENST00000590704 TMEM256-PLSCR3K7ERE1 68 aa11.74□□□□□ -0.53
CIRBP-229ENST00000590704 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
CIRBP-229ENST00000590704 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
CIRBP-229ENST00000590704 GHRHP01286 108 aa11.72□□□□□ -0.53
CIRBP-229ENST00000590704 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
CIRBP-229ENST00000590704 KRTAP13-3Q3SY46 172 aa11.72□□□□□ -0.53
CIRBP-229ENST00000590704 C1orf195Q5TG92 126 aa11.72□□□□□ -0.53
CIRBP-229ENST00000590704 LIMD2Q9BT23 127 aa11.72□□□□□ -0.53
CIRBP-229ENST00000590704 H3BQ85 93 aa11.71□□□□□ -0.53
CIRBP-229ENST00000590704 Q6Q795 121 aa11.71□□□□□ -0.53
CIRBP-229ENST00000590704 A0A1W2PNM2 257 aa11.7□□□□□ -0.54
CIRBP-229ENST00000590704 BAALC-AS2P0C853 105 aa11.7□□□□□ -0.54
CIRBP-229ENST00000590704 ATXN8Q156A1 80 aa11.7□□□□□ -0.54
CIRBP-229ENST00000590704 A0A1W2PPM0 123 aa11.68□□□□□ -0.54
CIRBP-229ENST00000590704 ASB16-AS1Q495Z4 193 aa11.66□□□□□ -0.54
CIRBP-229ENST00000590704 MUC17Q685J3 4493 aa11.65□□□□□ -0.54
CIRBP-229ENST00000590704 TRBV20-1A0A075B6N2 111 aa11.64□□□□□ -0.55
CIRBP-229ENST00000590704 A0A1B0GV72 72 aa11.64□□□□□ -0.55
CIRBP-229ENST00000590704 TEN1Q86WV5 123 aa11.64□□□□□ -0.55
CIRBP-229ENST00000590704 ANKRD29Q8N6D5 301 aa11.63□□□□□ -0.55
CIRBP-229ENST00000590704 TRBV7-4A0A0J9YYF1 115 aa11.62□□□□□ -0.55
CIRBP-229ENST00000590704 RNF213Q63HN8 5207 aa11.61□□□□□ -0.55
CIRBP-229ENST00000590704 COL5A1-AS1Q5SY13 56 aa11.61□□□□□ -0.55
CIRBP-229ENST00000590704 LYRM7Q5U5X0 104 aa11.6□□□□□ -0.55
CIRBP-229ENST00000590704 C9JAW5 83 aa11.58□□□□□ -0.56
CIRBP-229ENST00000590704 A0A087WSZ3 146 aa11.57□□□□□ -0.56
CIRBP-229ENST00000590704 Q96NJ1 140 aa11.57□□□□□ -0.56
CIRBP-229ENST00000590704 CDIP1Q9H305 208 aa11.57□□□□□ -0.56
CIRBP-229ENST00000590704 RBM3P98179 157 aaKnown RBP11.56□□□□□ -0.56
CIRBP-229ENST00000590704 OBSCN-AS1Q96MR7 158 aa11.55□□□□□ -0.56
CIRBP-229ENST00000590704 MTURNQ8N3F0 131 aa11.53□□□□□ -0.56
CIRBP-229ENST00000590704 MUC2Q02817 5179 aa11.53□□□□□ -0.56
CIRBP-229ENST00000590704 CCKP06307 115 aa11.51□□□□□ -0.57
CIRBP-229ENST00000590704 XP32Q5T750 250 aa11.51□□□□□ -0.57
CIRBP-229ENST00000590704 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
CIRBP-229ENST00000590704 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
CIRBP-229ENST00000590704 Q6ZQT0 140 aa11.48□□□□□ -0.57
CIRBP-229ENST00000590704 C9orf92A6NGG3 77 aa11.47□□□□□ -0.57
CIRBP-229ENST00000590704 JMJD7-PLA2G4BH0Y9G9 81 aa11.47□□□□□ -0.57
CIRBP-229ENST00000590704 H3BT86 120 aa11.47□□□□□ -0.57
CIRBP-229ENST00000590704 DSCR8Q96T75 97 aa11.47□□□□□ -0.57
CIRBP-229ENST00000590704 SS18L2Q9UHA2 77 aa11.46□□□□□ -0.57
CIRBP-229ENST00000590704 PRO0461Q9UI25 63 aa11.46□□□□□ -0.57
CIRBP-229ENST00000590704 LOC110117498A0A087WWA1 95 aa11.45□□□□□ -0.58
CIRBP-229ENST00000590704 LINC00472Q9H8W2 130 aa11.44□□□□□ -0.58
CIRBP-229ENST00000590704 C14orf132Q9NPU4 83 aa11.43□□□□□ -0.58
CIRBP-229ENST00000590704 K7EP34 96 aa11.42□□□□□ -0.58
CIRBP-229ENST00000590704 VPS25Q9BRG1 176 aa11.39□□□□□ -0.59
CIRBP-229ENST00000590704 KRTAP4-1Q9BYQ7 146 aa11.39□□□□□ -0.59
CIRBP-229ENST00000590704 DEFB116Q30KQ4 102 aa11.36□□□□□ -0.59
CIRBP-229ENST00000590704 PDE6GP18545 87 aa11.34□□□□□ -0.59
CIRBP-229ENST00000590704 A0A1B0GW54 56 aa11.3□□□□□ -0.6
CIRBP-229ENST00000590704 IGKV4-1P06312 121 aa11.3□□□□□ -0.6
CIRBP-229ENST00000590704 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
CIRBP-229ENST00000590704 GTF2H5Q6ZYL4 71 aa11.28□□□□□ -0.6
CIRBP-229ENST00000590704 SEC61BP60468 96 aaKnown RBP11.27□□□□□ -0.6
CIRBP-229ENST00000590704 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
CIRBP-229ENST00000590704 PCOTHQ58A44 107 aa11.25□□□□□ -0.61
CIRBP-229ENST00000590704 A0A0U1RQV1 116 aa11.24□□□□□ -0.61
CIRBP-229ENST00000590704 C21orf62-AS1Q17RA5 79 aa11.24□□□□□ -0.61
CIRBP-229ENST00000590704 SIGMAR1Q99720 223 aa11.24□□□□□ -0.61
CIRBP-229ENST00000590704 KRTAP16-1A8MUX0 517 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms