RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SNCGO76070 127 aa11.04□□□□□ -0.64
CLPTM1-209ENST00000588855 HMCN2Q8NDA2 5059 aa11.02□□□□□ -0.64
CLPTM1-209ENST00000588855 SCGB1C2P0DMR2 95 aa11.01□□□□□ -0.65
CLPTM1-209ENST00000588855 SSBP3-AS1Q7Z2R9 100 aa11.01□□□□□ -0.65
CLPTM1-209ENST00000588855 SNHG12Q9BXW3 62 aa10.99□□□□□ -0.65
CLPTM1-209ENST00000588855 PCP4L1A6NKN8 68 aa10.98□□□□□ -0.65
CLPTM1-209ENST00000588855 OCIAD2Q56VL3 154 aa10.98□□□□□ -0.65
CLPTM1-209ENST00000588855 PPDPFLQ8WWR9 84 aa10.98□□□□□ -0.65
CLPTM1-209ENST00000588855 DNAL4O96015 105 aa10.97□□□□□ -0.65
CLPTM1-209ENST00000588855 LST1O00453 97 aa10.96□□□□□ -0.65
CLPTM1-209ENST00000588855 TAX1BP3O14907 124 aa10.95□□□□□ -0.66
CLPTM1-209ENST00000588855 F8WEM9 126 aa10.94□□□□□ -0.66
CLPTM1-209ENST00000588855 SPAG11AQ6PDA7 123 aa10.94□□□□□ -0.66
CLPTM1-209ENST00000588855 H3BUT2 72 aa10.94□□□□□ -0.66
CLPTM1-209ENST00000588855 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
CLPTM1-209ENST00000588855 TRACP01848 142 aa10.93□□□□□ -0.66
CLPTM1-209ENST00000588855 C9orf118A6NHY6 69 aa10.92□□□□□ -0.66
CLPTM1-209ENST00000588855 TCL1BO95988 128 aa10.92□□□□□ -0.66
CLPTM1-209ENST00000588855 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
CLPTM1-209ENST00000588855 A0A0G2JQZ4 141 aa10.91□□□□□ -0.66
CLPTM1-209ENST00000588855 FABP2P12104 132 aa10.9□□□□□ -0.66
CLPTM1-209ENST00000588855 GHRHP01286 108 aa10.89□□□□□ -0.67
CLPTM1-209ENST00000588855 SPINK1P00995 79 aa10.89□□□□□ -0.67
CLPTM1-209ENST00000588855 LYRM7Q5U5X0 104 aa10.89□□□□□ -0.67
CLPTM1-209ENST00000588855 IGLV8-61A0A075B6I0 122 aa10.88□□□□□ -0.67
CLPTM1-209ENST00000588855 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
CLPTM1-209ENST00000588855 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
CLPTM1-209ENST00000588855 HRCT1Q6UXD1 115 aa10.88□□□□□ -0.67
CLPTM1-209ENST00000588855 COL5A1-AS1Q5SY13 56 aa10.87□□□□□ -0.67
CLPTM1-209ENST00000588855 A0A1W2PPM0 123 aa10.85□□□□□ -0.67
CLPTM1-209ENST00000588855 H3BQ85 93 aa10.84□□□□□ -0.67
CLPTM1-209ENST00000588855 IGFL1Q6UW32 110 aa10.84□□□□□ -0.67
CLPTM1-209ENST00000588855 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
CLPTM1-209ENST00000588855 TMEM256-PLSCR3K7ERE1 68 aa10.84□□□□□ -0.67
CLPTM1-209ENST00000588855 RPS29P62273 56 aaKnown RBP10.84□□□□□ -0.67
CLPTM1-209ENST00000588855 Q6JHZ5 121 aa10.84□□□□□ -0.67
CLPTM1-209ENST00000588855 TRBV20-1A0A075B6N2 111 aa10.83□□□□□ -0.68
CLPTM1-209ENST00000588855 CD164Q04900 197 aa10.82□□□□□ -0.68
CLPTM1-209ENST00000588855 H3BMG7 143 aa10.81□□□□□ -0.68
CLPTM1-209ENST00000588855 A0A1B0GV72 72 aa10.8□□□□□ -0.68
CLPTM1-209ENST00000588855 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
CLPTM1-209ENST00000588855 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
CLPTM1-209ENST00000588855 PRR4Q16378 134 aa10.79□□□□□ -0.68
CLPTM1-209ENST00000588855 LIMD2Q9BT23 127 aa10.77□□□□□ -0.69
CLPTM1-209ENST00000588855 C9JAW5 83 aa10.76□□□□□ -0.69
CLPTM1-209ENST00000588855 ANKRD29Q8N6D5 301 aa10.75□□□□□ -0.69
CLPTM1-209ENST00000588855 LPAP08519 4548 aa10.75□□□□□ -0.69
CLPTM1-209ENST00000588855 LRP2P98164 4655 aa10.75□□□□□ -0.69
CLPTM1-209ENST00000588855 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
CLPTM1-209ENST00000588855 TRBV7-7A0A0K0K1E9 115 aa10.72□□□□□ -0.69
CLPTM1-209ENST00000588855 Q5XG85 94 aa10.7□□□□□ -0.7
CLPTM1-209ENST00000588855 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
CLPTM1-209ENST00000588855 Q6Q795 121 aa10.68□□□□□ -0.7
CLPTM1-209ENST00000588855 FP248Q71RG6 208 aaPredicted RBP10.68□□□□□ -0.7
CLPTM1-209ENST00000588855 IGLV7-46A0A075B6I9 117 aa10.68□□□□□ -0.7
CLPTM1-209ENST00000588855 A0A1W2PNM2 257 aa10.68□□□□□ -0.7
CLPTM1-209ENST00000588855 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
CLPTM1-209ENST00000588855 TEN1Q86WV5 123 aa10.68□□□□□ -0.7
CLPTM1-209ENST00000588855 TRBV7-4A0A0J9YYF1 115 aa10.66□□□□□ -0.7
CLPTM1-209ENST00000588855 H3BT86 120 aa10.65□□□□□ -0.7
CLPTM1-209ENST00000588855 K7EP34 96 aa10.65□□□□□ -0.7
CLPTM1-209ENST00000588855 DSCR8Q96T75 97 aa10.63□□□□□ -0.71
CLPTM1-209ENST00000588855 UBR4Q5T4S7 5183 aa10.63□□□□□ -0.71
CLPTM1-209ENST00000588855 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
CLPTM1-209ENST00000588855 A0A087WSZ3 146 aa10.62□□□□□ -0.71
CLPTM1-209ENST00000588855 JMJD7-PLA2G4BH0Y9G9 81 aa10.62□□□□□ -0.71
CLPTM1-209ENST00000588855 CCKP06307 115 aa10.62□□□□□ -0.71
CLPTM1-209ENST00000588855 ASB16-AS1Q495Z4 193 aa10.6□□□□□ -0.71
CLPTM1-209ENST00000588855 TPRXLQ17RH7 258 aa10.59□□□□□ -0.71
CLPTM1-209ENST00000588855 OBSCN-AS1Q96MR7 158 aa10.59□□□□□ -0.71
CLPTM1-209ENST00000588855 VPS25Q9BRG1 176 aa10.59□□□□□ -0.71
CLPTM1-209ENST00000588855 SS18L2Q9UHA2 77 aa10.58□□□□□ -0.72
CLPTM1-209ENST00000588855 SMCPP49901 116 aaPredicted RBP10.58□□□□□ -0.72
CLPTM1-209ENST00000588855 C14orf132Q9NPU4 83 aa10.58□□□□□ -0.72
CLPTM1-209ENST00000588855 PRO0461Q9UI25 63 aa10.57□□□□□ -0.72
CLPTM1-209ENST00000588855 Q6ZQT0 140 aa10.56□□□□□ -0.72
CLPTM1-209ENST00000588855 GTF2H5Q6ZYL4 71 aa10.56□□□□□ -0.72
CLPTM1-209ENST00000588855 LOC110117498A0A087WWA1 95 aa10.55□□□□□ -0.72
CLPTM1-209ENST00000588855 KRTAP13-3Q3SY46 172 aa10.55□□□□□ -0.72
CLPTM1-209ENST00000588855 PDE6GP18545 87 aa10.5□□□□□ -0.73
CLPTM1-209ENST00000588855 CDIP1Q9H305 208 aa10.5□□□□□ -0.73
CLPTM1-209ENST00000588855 Q96NJ1 140 aa10.49□□□□□ -0.73
CLPTM1-209ENST00000588855 C9orf92A6NGG3 77 aa10.44□□□□□ -0.74
CLPTM1-209ENST00000588855 RNF213Q63HN8 5207 aa10.44□□□□□ -0.74
CLPTM1-209ENST00000588855 F8W1H4 67 aa10.43□□□□□ -0.74
CLPTM1-209ENST00000588855 C21orf62-AS1Q17RA5 79 aa10.43□□□□□ -0.74
CLPTM1-209ENST00000588855 LINC00472Q9H8W2 130 aa10.42□□□□□ -0.74
CLPTM1-209ENST00000588855 A0A1B0GV90 55 aa10.41□□□□□ -0.74
CLPTM1-209ENST00000588855 A0A1B0GW54 56 aa10.41□□□□□ -0.74
CLPTM1-209ENST00000588855 MUC17Q685J3 4493 aa10.41□□□□□ -0.74
CLPTM1-209ENST00000588855 DEFB116Q30KQ4 102 aa10.4□□□□□ -0.74
CLPTM1-209ENST00000588855 SIGMAR1Q99720 223 aa10.4□□□□□ -0.74
CLPTM1-209ENST00000588855 XP32Q5T750 250 aa10.39□□□□□ -0.75
CLPTM1-209ENST00000588855 IGKV4-1P06312 121 aa10.38□□□□□ -0.75
CLPTM1-209ENST00000588855 ETDBQ3ZM63 59 aa10.37□□□□□ -0.75
CLPTM1-209ENST00000588855 NREPQ16612 68 aa10.3□□□□□ -0.76
CLPTM1-209ENST00000588855 J3KT08 172 aa10.28□□□□□ -0.76
CLPTM1-209ENST00000588855 DSCR10P59022 87 aa10.27□□□□□ -0.77
CLPTM1-209ENST00000588855 IGHV6-1A0A0B4J1U7 121 aa10.24□□□□□ -0.77
CLPTM1-209ENST00000588855 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms