RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 RANBP2P49792 3224 aaKnown RBP3.34□□□□□ -1.87
SMAD4-203ENST00000585448 UNC80Q8N2C7 3258 aa3.34□□□□□ -1.88
SMAD4-203ENST00000585448 HTN3P15516 51 aa3.33□□□□□ -1.88
SMAD4-203ENST00000585448 AKAP6Q13023 2319 aa3.33□□□□□ -1.88
SMAD4-203ENST00000585448 EP300Q09472 2414 aaPredicted RBP3.33□□□□□ -1.88
SMAD4-203ENST00000585448 RP1L1Q8IWN7 2480 aaPredicted RBP3.33□□□□□ -1.88
SMAD4-203ENST00000585448 NBEAQ8NFP9 2946 aa3.32□□□□□ -1.88
SMAD4-203ENST00000585448 RPL37P61927 97 aaKnown RBP3.32□□□□□ -1.88
SMAD4-203ENST00000585448 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
SMAD4-203ENST00000585448 A0A096LNI7 61 aa3.31□□□□□ -1.88
SMAD4-203ENST00000585448 TNRC18O15417 2968 aaPredicted RBP3.29□□□□□ -1.88
SMAD4-203ENST00000585448 TRIOBPQ9H2D6 2365 aa3.29□□□□□ -1.88
SMAD4-203ENST00000585448 SPINK1P00995 79 aa3.29□□□□□ -1.88
SMAD4-203ENST00000585448 DEFB124Q8NES8 71 aa3.28□□□□□ -1.88
SMAD4-203ENST00000585448 ACACAQ13085 2346 aa3.28□□□□□ -1.88
SMAD4-203ENST00000585448 EP400Q96L91 3159 aa3.28□□□□□ -1.88
SMAD4-203ENST00000585448 C2CD3Q4AC94 2353 aa3.27□□□□□ -1.89
SMAD4-203ENST00000585448 KRTAP13-1Q8IUC0 172 aa3.27□□□□□ -1.89
SMAD4-203ENST00000585448 VPS13AQ96RL7 3174 aa3.27□□□□□ -1.89
SMAD4-203ENST00000585448 DEFB4AO15263 64 aa3.26□□□□□ -1.89
SMAD4-203ENST00000585448 DEFB135Q30KP9 77 aa3.26□□□□□ -1.89
SMAD4-203ENST00000585448 CFAP54Q96N23 3096 aa3.25□□□□□ -1.89
SMAD4-203ENST00000585448 ANKRD17O75179 2603 aaKnown RBP3.25□□□□□ -1.89
SMAD4-203ENST00000585448 NCOR1O75376 2440 aa3.25□□□□□ -1.89
SMAD4-203ENST00000585448 DNAH14Q0VDD8 3507 aa3.25□□□□□ -1.89
SMAD4-203ENST00000585448 CFAP47Q6ZTR5 3102 aa3.24□□□□□ -1.89
SMAD4-203ENST00000585448 MKI67P46013 3256 aaKnown RBP3.23□□□□□ -1.89
SMAD4-203ENST00000585448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMAD4-203ENST00000585448 SPINK6Q6UWN8 80 aa3.23□□□□□ -1.89
SMAD4-203ENST00000585448 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
SMAD4-203ENST00000585448 CACNA1HO95180 2353 aa3.23□□□□□ -1.89
SMAD4-203ENST00000585448 XIRP2A4UGR9 3374 aa3.23□□□□□ -1.89
SMAD4-203ENST00000585448 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SMAD4-203ENST00000585448 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
SMAD4-203ENST00000585448 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
SMAD4-203ENST00000585448 CHD7Q9P2D1 2997 aa3.21□□□□□ -1.9
SMAD4-203ENST00000585448 CHD9Q3L8U1 2897 aa3.21□□□□□ -1.9
SMAD4-203ENST00000585448 FRYLO94915 3013 aa3.2□□□□□ -1.9
SMAD4-203ENST00000585448 ABCA2Q9BZC7 2435 aa3.2□□□□□ -1.9
SMAD4-203ENST00000585448 ANKHD1Q8IWZ3 2542 aaKnown RBP3.2□□□□□ -1.9
SMAD4-203ENST00000585448 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
SMAD4-203ENST00000585448 SPTA1P02549 2419 aa3.2□□□□□ -1.9
SMAD4-203ENST00000585448 TRANK1O15050 2925 aa3.19□□□□□ -1.9
SMAD4-203ENST00000585448 HTTP42858 3142 aa3.18□□□□□ -1.9
SMAD4-203ENST00000585448 FRYQ5TBA9 3013 aa3.18□□□□□ -1.9
SMAD4-203ENST00000585448 CREBBPQ92793 2442 aa3.18□□□□□ -1.9
SMAD4-203ENST00000585448 TRIOO75962 3097 aa3.18□□□□□ -1.9
SMAD4-203ENST00000585448 IGF2RP11717 2491 aa3.17□□□□□ -1.9
SMAD4-203ENST00000585448 WDFY4Q6ZS81 3184 aa3.17□□□□□ -1.9
SMAD4-203ENST00000585448 KALRNO60229 2985 aa3.17□□□□□ -1.9
SMAD4-203ENST00000585448 ZDBF2Q9HCK1 2354 aa3.15□□□□□ -1.9
SMAD4-203ENST00000585448 PRUNE2Q8WUY3 3088 aa3.15□□□□□ -1.9
SMAD4-203ENST00000585448 C5orf42Q9H799 3197 aa3.14□□□□□ -1.91
SMAD4-203ENST00000585448 SPTBN5Q9NRC6 3674 aaKnown RBP3.14□□□□□ -1.91
SMAD4-203ENST00000585448 USP34Q70CQ2 3546 aa3.14□□□□□ -1.91
SMAD4-203ENST00000585448 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
SMAD4-203ENST00000585448 ATRXP46100 2492 aa3.14□□□□□ -1.91
SMAD4-203ENST00000585448 CHD6Q8TD26 2715 aa3.13□□□□□ -1.91
SMAD4-203ENST00000585448 S4R3F8 94 aa3.13□□□□□ -1.91
SMAD4-203ENST00000585448 SPTBN4Q9H254 2564 aa3.13□□□□□ -1.91
SMAD4-203ENST00000585448 AKAP13Q12802 2813 aa3.12□□□□□ -1.91
SMAD4-203ENST00000585448 TENM2Q9NT68 2774 aa3.12□□□□□ -1.91
SMAD4-203ENST00000585448 SPG11Q96JI7 2443 aa3.12□□□□□ -1.91
SMAD4-203ENST00000585448 FLG2Q5D862 2391 aaPredicted RBP3.11□□□□□ -1.91
SMAD4-203ENST00000585448 PIEZO2Q9H5I5 2752 aa3.11□□□□□ -1.91
SMAD4-203ENST00000585448 Q6ZRN7 208 aaPredicted RBP3.11□□□□□ -1.91
SMAD4-203ENST00000585448 APLNQ9ULZ1 77 aa3.11□□□□□ -1.91
SMAD4-203ENST00000585448 NBASA2RRP1 2371 aa3.1□□□□□ -1.91
SMAD4-203ENST00000585448 DCHS1Q96JQ0 3298 aa3.1□□□□□ -1.91
SMAD4-203ENST00000585448 SPTAN1Q13813 2472 aaKnown RBP3.1□□□□□ -1.91
SMAD4-203ENST00000585448 MAP1AP78559 2803 aaPredicted RBP3.09□□□□□ -1.91
SMAD4-203ENST00000585448 GVINP1Q7Z2Y8 2422 aa3.09□□□□□ -1.91
SMAD4-203ENST00000585448 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
SMAD4-203ENST00000585448 ITPR1Q14643 2758 aa3.09□□□□□ -1.92
SMAD4-203ENST00000585448 LAMA2P24043 3122 aaKnown RBP3.08□□□□□ -1.92
SMAD4-203ENST00000585448 INE1O15225 51 aa3.08□□□□□ -1.92
SMAD4-203ENST00000585448 UBE2DNLQ8IWF7 75 aa3.08□□□□□ -1.92
SMAD4-203ENST00000585448 DEFB123Q8N688 67 aa3.08□□□□□ -1.92
SMAD4-203ENST00000585448 DSPP15924 2871 aaKnown RBP3.08□□□□□ -1.92
SMAD4-203ENST00000585448 FREM2Q5SZK8 3169 aa3.08□□□□□ -1.92
SMAD4-203ENST00000585448 CEP290O15078 2479 aa3.08□□□□□ -1.92
SMAD4-203ENST00000585448 NCOR2Q9Y618 2525 aa3.07□□□□□ -1.92
SMAD4-203ENST00000585448 A0A0D9SG42 100 aa3.07□□□□□ -1.92
SMAD4-203ENST00000585448 CSPG4Q6UVK1 2322 aa3.07□□□□□ -1.92
SMAD4-203ENST00000585448 DMDP11532 3685 aa3.06□□□□□ -1.92
SMAD4-203ENST00000585448 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
SMAD4-203ENST00000585448 SPACA4Q8TDM5 124 aa3.06□□□□□ -1.92
SMAD4-203ENST00000585448 LAMA3Q16787 3333 aa3.05□□□□□ -1.92
SMAD4-203ENST00000585448 WDFY3Q8IZQ1 3526 aa3.05□□□□□ -1.92
SMAD4-203ENST00000585448 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
SMAD4-203ENST00000585448 ZFHX4Q86UP3 3567 aa3.03□□□□□ -1.92
SMAD4-203ENST00000585448 DMXL2Q8TDJ6 3036 aa3.03□□□□□ -1.92
SMAD4-203ENST00000585448 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
SMAD4-203ENST00000585448 R4GN34 69 aa3.03□□□□□ -1.92
SMAD4-203ENST00000585448 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
SMAD4-203ENST00000585448 BRCA2P51587 3418 aa3.01□□□□□ -1.93
SMAD4-203ENST00000585448 VCANP13611 3396 aa3.01□□□□□ -1.93
SMAD4-203ENST00000585448 LAMA1P25391 3075 aa3.01□□□□□ -1.93
SMAD4-203ENST00000585448 KRTAP12-1P59990 96 aa3□□□□□ -1.93
SMAD4-203ENST00000585448 TACC2O95359 2948 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms