RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
MKS1-211ENST00000581761 LINC00846Q9NV44 126 aa9.05□□□□□ -0.96
MKS1-211ENST00000581761 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
MKS1-211ENST00000581761 LRP1BQ9NZR2 4599 aa9.02□□□□□ -0.97
MKS1-211ENST00000581761 SCGB1A1P11684 91 aa9.01□□□□□ -0.97
MKS1-211ENST00000581761 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
MKS1-211ENST00000581761 PSORS1C2Q9UIG4 136 aa9.01□□□□□ -0.97
MKS1-211ENST00000581761 F8WEM9 126 aa9□□□□□ -0.97
MKS1-211ENST00000581761 KRTAP10-1P60331 282 aa9□□□□□ -0.97
MKS1-211ENST00000581761 SMIM29Q86T20 159 aa9□□□□□ -0.97
MKS1-211ENST00000581761 FAM30AQ9NZY2 134 aa9□□□□□ -0.97
MKS1-211ENST00000581761 C1orf137Q5JT78 98 aa8.99□□□□□ -0.97
MKS1-211ENST00000581761 ABCA13Q86UQ4 5058 aa8.99□□□□□ -0.97
MKS1-211ENST00000581761 Q6JHZ5 121 aa8.98□□□□□ -0.97
MKS1-211ENST00000581761 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
MKS1-211ENST00000581761 SPRR1BP22528 89 aa8.97□□□□□ -0.97
MKS1-211ENST00000581761 KRTAP17-1Q9BYP8 105 aa8.97□□□□□ -0.97
MKS1-211ENST00000581761 TRBV7-7A0A0K0K1E9 115 aa8.96□□□□□ -0.98
MKS1-211ENST00000581761 Q6Q795 121 aa8.96□□□□□ -0.98
MKS1-211ENST00000581761 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
MKS1-211ENST00000581761 HSPG2P98160 4391 aa8.95□□□□□ -0.98
MKS1-211ENST00000581761 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
MKS1-211ENST00000581761 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
MKS1-211ENST00000581761 PCP4P48539 62 aa8.94□□□□□ -0.98
MKS1-211ENST00000581761 Q6ZSA8 131 aa8.94□□□□□ -0.98
MKS1-211ENST00000581761 ZNF861PO60384 105 aa8.93□□□□□ -0.98
MKS1-211ENST00000581761 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
MKS1-211ENST00000581761 A0A1W2PNM2 257 aa8.92□□□□□ -0.98
MKS1-211ENST00000581761 ATP5EP2Q5VTU8 51 aa8.92□□□□□ -0.98
MKS1-211ENST00000581761 Q6ZVQ6 151 aa8.92□□□□□ -0.98
MKS1-211ENST00000581761 Q8NBF4 154 aa8.92□□□□□ -0.98
MKS1-211ENST00000581761 ZNF706Q9Y5V0 76 aaPredicted RBP8.92□□□□□ -0.98
MKS1-211ENST00000581761 IGLV8-61A0A075B6I0 122 aa8.91□□□□□ -0.98
MKS1-211ENST00000581761 CDK2AP2O75956 126 aa8.91□□□□□ -0.98
MKS1-211ENST00000581761 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
MKS1-211ENST00000581761 IMUPQ9GZP8 106 aa8.91□□□□□ -0.98
MKS1-211ENST00000581761 IGLV7-43P04211 117 aa8.9□□□□□ -0.98
MKS1-211ENST00000581761 HAMPP81172 84 aa8.9□□□□□ -0.98
MKS1-211ENST00000581761 IGFL1Q6UW32 110 aa8.89□□□□□ -0.99
MKS1-211ENST00000581761 A0A1B0GW54 56 aa8.87□□□□□ -0.99
MKS1-211ENST00000581761 A0A0G2JQZ4 141 aa8.86□□□□□ -0.99
MKS1-211ENST00000581761 NREPQ16612 68 aa8.86□□□□□ -0.99
MKS1-211ENST00000581761 LINC00483Q53H64 154 aa8.86□□□□□ -0.99
MKS1-211ENST00000581761 KRTAP4-5Q9BYR2 181 aa8.85□□□□□ -0.99
MKS1-211ENST00000581761 CRYGAP11844 174 aa8.83□□□□□ -1
MKS1-211ENST00000581761 HIST1H4AP62805 103 aaKnown RBP8.83□□□□□ -1
MKS1-211ENST00000581761 C9orf153Q5TBE3 101 aa8.83□□□□□ -1
MKS1-211ENST00000581761 IGLV9-49A0A0B4J1Y8 123 aa8.82□□□□□ -1
MKS1-211ENST00000581761 FAM236AA0A1B0GUQ0 79 aa8.82□□□□□ -1
MKS1-211ENST00000581761 FAM236BA0A1B0GV22 79 aa8.82□□□□□ -1
MKS1-211ENST00000581761 CXCL6P80162 114 aa8.81□□□□□ -1
MKS1-211ENST00000581761 Q8N1X5 172 aa8.8□□□□□ -1
MKS1-211ENST00000581761 A0A087WVE0 104 aa8.79□□□□□ -1
MKS1-211ENST00000581761 ANAPC11Q9NYG5 84 aa8.79□□□□□ -1
MKS1-211ENST00000581761 VPS13BQ7Z7G8 4022 aa8.79□□□□□ -1
MKS1-211ENST00000581761 ANAPC13Q9BS18 74 aa8.78□□□□□ -1
MKS1-211ENST00000581761 A0A087WSZ3 146 aa8.77□□□□□ -1.01
MKS1-211ENST00000581761 BPY2O14599 106 aa8.77□□□□□ -1.01
MKS1-211ENST00000581761 RPL37AP61513 92 aaKnown RBP8.77□□□□□ -1.01
MKS1-211ENST00000581761 MOBPQ13875 183 aa8.76□□□□□ -1.01
MKS1-211ENST00000581761 FAT1Q14517 4588 aa8.75□□□□□ -1.01
MKS1-211ENST00000581761 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
MKS1-211ENST00000581761 ATOX1O00244 68 aa8.7□□□□□ -1.02
MKS1-211ENST00000581761 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
MKS1-211ENST00000581761 HRCT1Q6UXD1 115 aa8.7□□□□□ -1.02
MKS1-211ENST00000581761 Q8N9L7 120 aa8.7□□□□□ -1.02
MKS1-211ENST00000581761 IGKV4-1P06312 121 aa8.69□□□□□ -1.02
MKS1-211ENST00000581761 Q5VSD8 79 aa8.67□□□□□ -1.02
MKS1-211ENST00000581761 DSCR10P59022 87 aa8.66□□□□□ -1.02
MKS1-211ENST00000581761 DEFB116Q30KQ4 102 aa8.66□□□□□ -1.02
MKS1-211ENST00000581761 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
MKS1-211ENST00000581761 MYCBP2O75592 4640 aa8.65□□□□□ -1.02
MKS1-211ENST00000581761 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
MKS1-211ENST00000581761 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.02
MKS1-211ENST00000581761 SS18L2Q9UHA2 77 aa8.64□□□□□ -1.03
MKS1-211ENST00000581761 HERC1Q15751 4861 aa8.64□□□□□ -1.03
MKS1-211ENST00000581761 LINC00472Q9H8W2 130 aa8.63□□□□□ -1.03
MKS1-211ENST00000581761 A0A087X002 238 aa8.62□□□□□ -1.03
MKS1-211ENST00000581761 SPINK6Q6UWN8 80 aa8.62□□□□□ -1.03
MKS1-211ENST00000581761 K7EQZ3 153 aa8.61□□□□□ -1.03
MKS1-211ENST00000581761 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
MKS1-211ENST00000581761 KRTAP13-2Q52LG2 175 aa8.61□□□□□ -1.03
MKS1-211ENST00000581761 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
MKS1-211ENST00000581761 CD164Q04900 197 aa8.6□□□□□ -1.03
MKS1-211ENST00000581761 DMBT1Q9UGM3 2413 aaPredicted RBP8.58□□□□□ -1.04
MKS1-211ENST00000581761 J3KT08 172 aa8.58□□□□□ -1.04
MKS1-211ENST00000581761 COX7CP15954 63 aa8.58□□□□□ -1.04
MKS1-211ENST00000581761 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
MKS1-211ENST00000581761 SERP2Q8N6R1 65 aa8.58□□□□□ -1.04
MKS1-211ENST00000581761 Q96NJ1 140 aa8.57□□□□□ -1.04
MKS1-211ENST00000581761 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
MKS1-211ENST00000581761 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
MKS1-211ENST00000581761 A8MWP4 228 aa8.55□□□□□ -1.04
MKS1-211ENST00000581761 UQCRQO14949 82 aa8.55□□□□□ -1.04
MKS1-211ENST00000581761 SMIM20Q8N5G0 67 aa8.55□□□□□ -1.04
MKS1-211ENST00000581761 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
MKS1-211ENST00000581761 TRAV7A0A075B6U4 112 aa8.53□□□□□ -1.04
MKS1-211ENST00000581761 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
MKS1-211ENST00000581761 NDUFB1O75438 58 aa8.52□□□□□ -1.05
MKS1-211ENST00000581761 TYMSOSQ8TAI1 123 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 239.4 ms