RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 SPINK7P58062 85 aa3.24□□□□□ -1.89
NF1-219ENST00000579081 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
NF1-219ENST00000579081 R4GN34 69 aa3.23□□□□□ -1.89
NF1-219ENST00000579081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.22□□□□□ -1.89
NF1-219ENST00000579081 WDR87Q6ZQQ6 2873 aa3.22□□□□□ -1.89
NF1-219ENST00000579081 PLAC4Q8WY50 150 aa3.21□□□□□ -1.89
NF1-219ENST00000579081 GCN1Q92616 2671 aaKnown RBP3.21□□□□□ -1.9
NF1-219ENST00000579081 COL6A5A8TX70 2615 aa3.21□□□□□ -1.9
NF1-219ENST00000579081 DMBT1Q9UGM3 2413 aaPredicted RBP3.2□□□□□ -1.9
NF1-219ENST00000579081 GIG44P09565 113 aaPredicted RBP3.2□□□□□ -1.9
NF1-219ENST00000579081 H1FX-AS1Q4G0G2 97 aa3.2□□□□□ -1.9
NF1-219ENST00000579081 KRTAP10-3P60369 221 aa3.2□□□□□ -1.9
NF1-219ENST00000579081 NOTCH1P46531 2555 aa3.2□□□□□ -1.9
NF1-219ENST00000579081 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
NF1-219ENST00000579081 CEP350Q5VT06 3117 aa3.2□□□□□ -1.9
NF1-219ENST00000579081 MAST4O15021 2626 aa3.2□□□□□ -1.9
NF1-219ENST00000579081 FLNAP21333 2647 aaKnown RBP3.19□□□□□ -1.9
NF1-219ENST00000579081 M0QZ58 72 aa3.19□□□□□ -1.9
NF1-219ENST00000579081 NSD1Q96L73 2696 aaPredicted RBP3.18□□□□□ -1.9
NF1-219ENST00000579081 A6NN06 94 aa3.18□□□□□ -1.9
NF1-219ENST00000579081 HECTD1Q9ULT8 2610 aa3.17□□□□□ -1.9
NF1-219ENST00000579081 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
NF1-219ENST00000579081 A0A0C4DFX4 3053 aa3.16□□□□□ -1.9
NF1-219ENST00000579081 ZFHX4Q86UP3 3567 aa3.16□□□□□ -1.9
NF1-219ENST00000579081 LINC00472Q9H8W2 130 aa3.15□□□□□ -1.9
NF1-219ENST00000579081 ATRQ13535 2644 aa3.15□□□□□ -1.9
NF1-219ENST00000579081 MMP24-AS1A0A0U1RRL7 71 aa3.14□□□□□ -1.91
NF1-219ENST00000579081 STAB2Q8WWQ8 2551 aa3.14□□□□□ -1.91
NF1-219ENST00000579081 Q5W150 140 aa3.13□□□□□ -1.91
NF1-219ENST00000579081 RELNP78509 3460 aa3.13□□□□□ -1.91
NF1-219ENST00000579081 PLAC8Q9NZF1 115 aa3.13□□□□□ -1.91
NF1-219ENST00000579081 Q5VSD8 79 aa3.13□□□□□ -1.91
NF1-219ENST00000579081 CENPFP49454 3210 aa3.12□□□□□ -1.91
NF1-219ENST00000579081 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
NF1-219ENST00000579081 TEP1Q99973 2627 aaKnown RBP3.12□□□□□ -1.91
NF1-219ENST00000579081 A0A096LNT2 108 aa3.11□□□□□ -1.91
NF1-219ENST00000579081 KRTAP29-1A8MX34 341 aaPredicted RBP3.11□□□□□ -1.91
NF1-219ENST00000579081 OXTP01178 125 aa3.09□□□□□ -1.91
NF1-219ENST00000579081 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.91
NF1-219ENST00000579081 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.92
NF1-219ENST00000579081 VCANP13611 3396 aa3.08□□□□□ -1.92
NF1-219ENST00000579081 DNAH12Q6ZR08 3092 aa3.07□□□□□ -1.92
NF1-219ENST00000579081 C20orf166-AS1Q96NR2 134 aa3.07□□□□□ -1.92
NF1-219ENST00000579081 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
NF1-219ENST00000579081 FLNBO75369 2602 aaKnown RBP3.06□□□□□ -1.92
NF1-219ENST00000579081 CDH23Q9H251 3354 aa3.05□□□□□ -1.92
NF1-219ENST00000579081 WDFY3Q8IZQ1 3526 aa3.05□□□□□ -1.92
NF1-219ENST00000579081 EYSQ5T1H1 3165 aa3.04□□□□□ -1.92
NF1-219ENST00000579081 ITPR3Q14573 2671 aa3.04□□□□□ -1.92
NF1-219ENST00000579081 AKAP13Q12802 2813 aa3.04□□□□□ -1.92
NF1-219ENST00000579081 KRTAP1-1Q07627 177 aa3.04□□□□□ -1.92
NF1-219ENST00000579081 SETXQ7Z333 2677 aaKnown RBP3.04□□□□□ -1.92
NF1-219ENST00000579081 KRTAP1-3Q8IUG1 177 aa3.04□□□□□ -1.92
NF1-219ENST00000579081 KRTAP4-16G5E9R7 235 aaPredicted RBP3.03□□□□□ -1.92
NF1-219ENST00000579081 CFAP46Q8IYW2 2715 aa3.03□□□□□ -1.92
NF1-219ENST00000579081 Q8NDZ9 215 aa3.02□□□□□ -1.93
NF1-219ENST00000579081 KRTAP10-1P60331 282 aa3.02□□□□□ -1.93
NF1-219ENST00000579081 MKI67P46013 3256 aaKnown RBP3.02□□□□□ -1.93
NF1-219ENST00000579081 KRTAP26-1Q6PEX3 210 aa3.02□□□□□ -1.93
NF1-219ENST00000579081 CHD6Q8TD26 2715 aa3.02□□□□□ -1.93
NF1-219ENST00000579081 A8MUU9 505 aa3.01□□□□□ -1.93
NF1-219ENST00000579081 ZNF292O60281 2723 aa3.01□□□□□ -1.93
NF1-219ENST00000579081 MAP1AP78559 2803 aaPredicted RBP3.01□□□□□ -1.93
NF1-219ENST00000579081 PANO1I0J062 215 aa3.01□□□□□ -1.93
NF1-219ENST00000579081 PRRC2CQ9Y520 2896 aaKnown RBP3.01□□□□□ -1.93
NF1-219ENST00000579081 RANBP2P49792 3224 aaKnown RBP2.99□□□□□ -1.93
NF1-219ENST00000579081 LAMA2P24043 3122 aaKnown RBP2.99□□□□□ -1.93
NF1-219ENST00000579081 PRUNE2Q8WUY3 3088 aa2.99□□□□□ -1.93
NF1-219ENST00000579081 KRTAP10-2P60368 255 aa2.99□□□□□ -1.93
NF1-219ENST00000579081 NIPBLQ6KC79 2804 aaeCLIP2.98□□□□□ -1.93
NF1-219ENST00000579081 BRCA2P51587 3418 aa2.97□□□□□ -1.93
NF1-219ENST00000579081 TNP1P09430 55 aa2.96□□□□□ -1.94
NF1-219ENST00000579081 BAHCC1Q9P281 2608 aa2.95□□□□□ -1.94
NF1-219ENST00000579081 KRTAP1-5Q9BYS1 174 aa2.95□□□□□ -1.94
NF1-219ENST00000579081 LAMA3Q16787 3333 aa2.95□□□□□ -1.94
NF1-219ENST00000579081 CYSTM1Q9H1C7 97 aa2.95□□□□□ -1.94
NF1-219ENST00000579081 UTP20O75691 2785 aaKnown RBP2.95□□□□□ -1.94
NF1-219ENST00000579081 INE1O15225 51 aa2.94□□□□□ -1.94
NF1-219ENST00000579081 DNAH14Q0VDD8 3507 aa2.94□□□□□ -1.94
NF1-219ENST00000579081 A8MU10 97 aa2.93□□□□□ -1.94
NF1-219ENST00000579081 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
NF1-219ENST00000579081 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
NF1-219ENST00000579081 KRTAP11-1Q8IUC1 163 aa2.92□□□□□ -1.94
NF1-219ENST00000579081 ITPR2Q14571 2701 aa2.92□□□□□ -1.94
NF1-219ENST00000579081 CSMD2Q7Z408 3487 aa2.91□□□□□ -1.94
NF1-219ENST00000579081 IGSF10Q6WRI0 2623 aa2.91□□□□□ -1.94
NF1-219ENST00000579081 COL6A3P12111 3177 aa2.91□□□□□ -1.94
NF1-219ENST00000579081 SPENQ96T58 3664 aaKnown RBP2.91□□□□□ -1.94
NF1-219ENST00000579081 H0YAA0 97 aa2.91□□□□□ -1.94
NF1-219ENST00000579081 C5orf42Q9H799 3197 aa2.91□□□□□ -1.94
NF1-219ENST00000579081 TRIOO75962 3097 aa2.9□□□□□ -1.95
NF1-219ENST00000579081 XIRP2A4UGR9 3374 aa2.9□□□□□ -1.95
NF1-219ENST00000579081 MYO15AQ9UKN7 3530 aa2.9□□□□□ -1.95
NF1-219ENST00000579081 TRANK1O15050 2925 aa2.89□□□□□ -1.95
NF1-219ENST00000579081 CSMD1Q96PZ7 3565 aa2.89□□□□□ -1.95
NF1-219ENST00000579081 UBR5O95071 2799 aaPredicted RBP2.88□□□□□ -1.95
NF1-219ENST00000579081 SPEGQ15772 3267 aa2.87□□□□□ -1.95
NF1-219ENST00000579081 CFAP54Q96N23 3096 aa2.86□□□□□ -1.95
NF1-219ENST00000579081 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
NF1-219ENST00000579081 KRTAP10-8P60410 259 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms