RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 NAA38Q9BRA0 125 aaKnown RBP10.46□□□□□ -0.73
COMMD4-222ENST00000568034 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
COMMD4-222ENST00000568034 LAMTOR3Q9UHA4 124 aa10.45□□□□□ -0.74
COMMD4-222ENST00000568034 LINC00304Q8N9R0 145 aa10.44□□□□□ -0.74
COMMD4-222ENST00000568034 Q8NBF4 154 aa10.44□□□□□ -0.74
COMMD4-222ENST00000568034 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
COMMD4-222ENST00000568034 SSBP3-AS1Q7Z2R9 100 aa10.43□□□□□ -0.74
COMMD4-222ENST00000568034 C9orf118A6NHY6 69 aa10.41□□□□□ -0.74
COMMD4-222ENST00000568034 LST1O00453 97 aa10.41□□□□□ -0.74
COMMD4-222ENST00000568034 SCGB1C2P0DMR2 95 aa10.41□□□□□ -0.74
COMMD4-222ENST00000568034 PPDPFLQ8WWR9 84 aa10.41□□□□□ -0.74
COMMD4-222ENST00000568034 SNCGO76070 127 aa10.4□□□□□ -0.74
COMMD4-222ENST00000568034 OCIAD2Q56VL3 154 aa10.39□□□□□ -0.75
COMMD4-222ENST00000568034 H3BUT2 72 aa10.37□□□□□ -0.75
COMMD4-222ENST00000568034 TRACP01848 142 aa10.37□□□□□ -0.75
COMMD4-222ENST00000568034 TCL1BO95988 128 aa10.36□□□□□ -0.75
COMMD4-222ENST00000568034 FABP2P12104 132 aa10.36□□□□□ -0.75
COMMD4-222ENST00000568034 GTF2H5Q6ZYL4 71 aa10.36□□□□□ -0.75
COMMD4-222ENST00000568034 DNAL4O96015 105 aa10.35□□□□□ -0.75
COMMD4-222ENST00000568034 SPAG11AQ6PDA7 123 aa10.35□□□□□ -0.75
COMMD4-222ENST00000568034 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
COMMD4-222ENST00000568034 LYRM7Q5U5X0 104 aa10.34□□□□□ -0.75
COMMD4-222ENST00000568034 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
COMMD4-222ENST00000568034 A0A1W2PPM0 123 aa10.33□□□□□ -0.76
COMMD4-222ENST00000568034 UBE2V1Q13404 147 aa10.33□□□□□ -0.76
COMMD4-222ENST00000568034 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
COMMD4-222ENST00000568034 F8WEM9 126 aa10.31□□□□□ -0.76
COMMD4-222ENST00000568034 ATXN8Q156A1 80 aa10.31□□□□□ -0.76
COMMD4-222ENST00000568034 SPINK1P00995 79 aa10.3□□□□□ -0.76
COMMD4-222ENST00000568034 GHRHP01286 108 aa10.3□□□□□ -0.76
COMMD4-222ENST00000568034 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
COMMD4-222ENST00000568034 C4orf48Q5BLP8 95 aa10.3□□□□□ -0.76
COMMD4-222ENST00000568034 SPCS1Q9Y6A9 102 aa10.3□□□□□ -0.76
COMMD4-222ENST00000568034 K7EP34 96 aa10.29□□□□□ -0.76
COMMD4-222ENST00000568034 RPS29P62273 56 aaKnown RBP10.28□□□□□ -0.76
COMMD4-222ENST00000568034 IGFL1Q6UW32 110 aa10.28□□□□□ -0.76
COMMD4-222ENST00000568034 TRBV20-1A0A075B6N2 111 aa10.27□□□□□ -0.77
COMMD4-222ENST00000568034 H3BQ85 93 aa10.27□□□□□ -0.77
COMMD4-222ENST00000568034 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
COMMD4-222ENST00000568034 CD164Q04900 197 aa10.26□□□□□ -0.77
COMMD4-222ENST00000568034 Q6JHZ5 121 aa10.26□□□□□ -0.77
COMMD4-222ENST00000568034 HRCT1Q6UXD1 115 aa10.26□□□□□ -0.77
COMMD4-222ENST00000568034 RETNLBQ9BQ08 111 aa10.24□□□□□ -0.77
COMMD4-222ENST00000568034 H3BMG7 143 aa10.23□□□□□ -0.77
COMMD4-222ENST00000568034 BAALC-AS2P0C853 105 aa10.23□□□□□ -0.77
COMMD4-222ENST00000568034 LPAP08519 4548 aa10.22□□□□□ -0.77
COMMD4-222ENST00000568034 C9JAW5 83 aa10.19□□□□□ -0.78
COMMD4-222ENST00000568034 UBR4Q5T4S7 5183 aa10.18□□□□□ -0.78
COMMD4-222ENST00000568034 A0A1B0GV72 72 aa10.18□□□□□ -0.78
COMMD4-222ENST00000568034 Q5XG85 94 aa10.18□□□□□ -0.78
COMMD4-222ENST00000568034 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
COMMD4-222ENST00000568034 LRP2P98164 4655 aa10.18□□□□□ -0.78
COMMD4-222ENST00000568034 PRR4Q16378 134 aa10.17□□□□□ -0.78
COMMD4-222ENST00000568034 TRBV7-7A0A0K0K1E9 115 aa10.16□□□□□ -0.78
COMMD4-222ENST00000568034 LIMD2Q9BT23 127 aa10.16□□□□□ -0.78
COMMD4-222ENST00000568034 Q6Q795 121 aa10.15□□□□□ -0.78
COMMD4-222ENST00000568034 A0A1W2PNM2 257 aa10.14□□□□□ -0.79
COMMD4-222ENST00000568034 MTURNQ8N3F0 131 aa10.13□□□□□ -0.79
COMMD4-222ENST00000568034 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
COMMD4-222ENST00000568034 F8W1H4 67 aa10.12□□□□□ -0.79
COMMD4-222ENST00000568034 H3BT86 120 aa10.11□□□□□ -0.79
COMMD4-222ENST00000568034 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
COMMD4-222ENST00000568034 TEN1Q86WV5 123 aa10.11□□□□□ -0.79
COMMD4-222ENST00000568034 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
COMMD4-222ENST00000568034 IGLV7-46A0A075B6I9 117 aa10.09□□□□□ -0.79
COMMD4-222ENST00000568034 C1orf195Q5TG92 126 aa10.08□□□□□ -0.8
COMMD4-222ENST00000568034 OBSCN-AS1Q96MR7 158 aa10.08□□□□□ -0.8
COMMD4-222ENST00000568034 SMCPP49901 116 aaPredicted RBP10.07□□□□□ -0.8
COMMD4-222ENST00000568034 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
COMMD4-222ENST00000568034 PRO0461Q9UI25 63 aa10.07□□□□□ -0.8
COMMD4-222ENST00000568034 JMJD7-PLA2G4BH0Y9G9 81 aa10.06□□□□□ -0.8
COMMD4-222ENST00000568034 A0A087WSZ3 146 aa10.05□□□□□ -0.8
COMMD4-222ENST00000568034 DSCR8Q96T75 97 aa10.05□□□□□ -0.8
COMMD4-222ENST00000568034 CCKP06307 115 aa10.04□□□□□ -0.8
COMMD4-222ENST00000568034 TPRXLQ17RH7 258 aa10.03□□□□□ -0.8
COMMD4-222ENST00000568034 LOC110117498A0A087WWA1 95 aa10.02□□□□□ -0.81
COMMD4-222ENST00000568034 K7ERU9 68 aa10.02□□□□□ -0.81
COMMD4-222ENST00000568034 Q6ZQT0 140 aa10.02□□□□□ -0.81
COMMD4-222ENST00000568034 C14orf132Q9NPU4 83 aa10.01□□□□□ -0.81
COMMD4-222ENST00000568034 KRTAP13-3Q3SY46 172 aa10□□□□□ -0.81
COMMD4-222ENST00000568034 J3QR89 54 aa9.99□□□□□ -0.81
COMMD4-222ENST00000568034 SS18L2Q9UHA2 77 aa9.99□□□□□ -0.81
COMMD4-222ENST00000568034 MUC17Q685J3 4493 aa9.98□□□□□ -0.81
COMMD4-222ENST00000568034 VPS25Q9BRG1 176 aa9.98□□□□□ -0.81
COMMD4-222ENST00000568034 Q96NJ1 140 aa9.97□□□□□ -0.81
COMMD4-222ENST00000568034 PDE6GP18545 87 aa9.96□□□□□ -0.82
COMMD4-222ENST00000568034 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
COMMD4-222ENST00000568034 CDIP1Q9H305 208 aa9.89□□□□□ -0.83
COMMD4-222ENST00000568034 LINC00472Q9H8W2 130 aa9.89□□□□□ -0.83
COMMD4-222ENST00000568034 A0A1B0GW54 56 aa9.88□□□□□ -0.83
COMMD4-222ENST00000568034 RNF213Q63HN8 5207 aa9.88□□□□□ -0.83
COMMD4-222ENST00000568034 C21orf62-AS1Q17RA5 79 aa9.87□□□□□ -0.83
COMMD4-222ENST00000568034 C9orf92A6NGG3 77 aa9.86□□□□□ -0.83
COMMD4-222ENST00000568034 XP32Q5T750 250 aa9.84□□□□□ -0.83
COMMD4-222ENST00000568034 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
COMMD4-222ENST00000568034 IGKV4-1P06312 121 aa9.81□□□□□ -0.84
COMMD4-222ENST00000568034 SIGMAR1Q99720 223 aa9.81□□□□□ -0.84
COMMD4-222ENST00000568034 NREPQ16612 68 aa9.74□□□□□ -0.85
COMMD4-222ENST00000568034 J3KT08 172 aa9.73□□□□□ -0.85
COMMD4-222ENST00000568034 DSCR10P59022 87 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms