RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 C3orf22Q8N5N4 141 aa11.78□□□□□ -0.52
PKD1-230ENST00000565639 CDIP1Q9H305 208 aa11.78□□□□□ -0.52
PKD1-230ENST00000565639 IGLV7-43P04211 117 aa11.78□□□□□ -0.52
PKD1-230ENST00000565639 HAMPP81172 84 aa11.77□□□□□ -0.53
PKD1-230ENST00000565639 PKHD1P08F94 4074 aa11.74□□□□□ -0.53
PKD1-230ENST00000565639 ZNF706Q9Y5V0 76 aaPredicted RBP11.74□□□□□ -0.53
PKD1-230ENST00000565639 F8WEM9 126 aa11.73□□□□□ -0.53
PKD1-230ENST00000565639 SPRR4Q96PI1 79 aa11.72□□□□□ -0.53
PKD1-230ENST00000565639 LRP1BQ9NZR2 4599 aa11.72□□□□□ -0.53
PKD1-230ENST00000565639 SCGB1A1P11684 91 aa11.7□□□□□ -0.54
PKD1-230ENST00000565639 SRRM2Q9UQ35 2752 aaKnown RBP11.7□□□□□ -0.54
PKD1-230ENST00000565639 IGLV8-61A0A075B6I0 122 aa11.7□□□□□ -0.54
PKD1-230ENST00000565639 LINC00483Q53H64 154 aa11.69□□□□□ -0.54
PKD1-230ENST00000565639 DYNC1H1Q14204 4646 aaKnown RBP11.68□□□□□ -0.54
PKD1-230ENST00000565639 XGP55808 180 aa11.67□□□□□ -0.54
PKD1-230ENST00000565639 LINC00846Q9NV44 126 aa11.67□□□□□ -0.54
PKD1-230ENST00000565639 SIGMAR1Q99720 223 aa11.63□□□□□ -0.55
PKD1-230ENST00000565639 A0A1B0GW54 56 aa11.62□□□□□ -0.55
PKD1-230ENST00000565639 Q6JHZ5 121 aa11.62□□□□□ -0.55
PKD1-230ENST00000565639 LINC00643Q86TS7 51 aa11.61□□□□□ -0.55
PKD1-230ENST00000565639 IGFL1Q6UW32 110 aa11.61□□□□□ -0.55
PKD1-230ENST00000565639 Q8NBF4 154 aa11.61□□□□□ -0.55
PKD1-230ENST00000565639 A0A1W2PNM2 257 aa11.6□□□□□ -0.55
PKD1-230ENST00000565639 UBL5Q9BZL1 73 aa11.59□□□□□ -0.55
PKD1-230ENST00000565639 MT-ATP8P03928 68 aa11.58□□□□□ -0.56
PKD1-230ENST00000565639 RPL37AP61513 92 aaKnown RBP11.58□□□□□ -0.56
PKD1-230ENST00000565639 APOBP04114 4563 aaKnown RBP11.55□□□□□ -0.56
PKD1-230ENST00000565639 CRYGAP11844 174 aa11.54□□□□□ -0.56
PKD1-230ENST00000565639 IGLV9-49A0A0B4J1Y8 123 aa11.54□□□□□ -0.56
PKD1-230ENST00000565639 ANAPC11Q9NYG5 84 aa11.54□□□□□ -0.56
PKD1-230ENST00000565639 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.56
PKD1-230ENST00000565639 C9orf153Q5TBE3 101 aa11.52□□□□□ -0.56
PKD1-230ENST00000565639 Q6ZVQ6 151 aa11.52□□□□□ -0.56
PKD1-230ENST00000565639 VPS13BQ7Z7G8 4022 aa11.52□□□□□ -0.57
PKD1-230ENST00000565639 A0A0G2JQZ4 141 aa11.52□□□□□ -0.57
PKD1-230ENST00000565639 Q6Q795 121 aa11.52□□□□□ -0.57
PKD1-230ENST00000565639 ATP5EP2Q5VTU8 51 aa11.49□□□□□ -0.57
PKD1-230ENST00000565639 SPINK6Q6UWN8 80 aa11.48□□□□□ -0.57
PKD1-230ENST00000565639 TRBV7-7A0A0K0K1E9 115 aa11.48□□□□□ -0.57
PKD1-230ENST00000565639 MOBPQ13875 183 aa11.48□□□□□ -0.57
PKD1-230ENST00000565639 FAM229BQ4G0N7 80 aa11.48□□□□□ -0.57
PKD1-230ENST00000565639 NREPQ16612 68 aa11.47□□□□□ -0.57
PKD1-230ENST00000565639 CDK2AP2O75956 126 aa11.46□□□□□ -0.58
PKD1-230ENST00000565639 IMUPQ9GZP8 106 aa11.46□□□□□ -0.58
PKD1-230ENST00000565639 KRTAP10-4P60372 401 aaPredicted RBP11.45□□□□□ -0.58
PKD1-230ENST00000565639 KRTAP1-4P0C5Y4 121 aa11.44□□□□□ -0.58
PKD1-230ENST00000565639 IGKV3D-7A0A0C4DH55 119 aa11.43□□□□□ -0.58
PKD1-230ENST00000565639 SSBP3-AS1Q7Z2R9 100 aa11.43□□□□□ -0.58
PKD1-230ENST00000565639 A0A087WSZ3 146 aa11.42□□□□□ -0.58
PKD1-230ENST00000565639 CXCL6P80162 114 aa11.41□□□□□ -0.58
PKD1-230ENST00000565639 A0A087X002 238 aa11.39□□□□□ -0.59
PKD1-230ENST00000565639 KRTAP13-2Q52LG2 175 aa11.37□□□□□ -0.59
PKD1-230ENST00000565639 EPPK1P58107 5090 aaKnown RBP11.37□□□□□ -0.59
PKD1-230ENST00000565639 FAT1Q14517 4588 aa11.37□□□□□ -0.59
PKD1-230ENST00000565639 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
PKD1-230ENST00000565639 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
PKD1-230ENST00000565639 CD164Q04900 197 aa11.35□□□□□ -0.59
PKD1-230ENST00000565639 BPY2O14599 106 aa11.34□□□□□ -0.59
PKD1-230ENST00000565639 HRCT1Q6UXD1 115 aa11.32□□□□□ -0.6
PKD1-230ENST00000565639 SS18L2Q9UHA2 77 aa11.32□□□□□ -0.6
PKD1-230ENST00000565639 HIST1H4AP62805 103 aaKnown RBP11.3□□□□□ -0.6
PKD1-230ENST00000565639 HSPG2P98160 4391 aa11.28□□□□□ -0.6
PKD1-230ENST00000565639 LINC00472Q9H8W2 130 aa11.28□□□□□ -0.6
PKD1-230ENST00000565639 Q5VSD8 79 aa11.27□□□□□ -0.61
PKD1-230ENST00000565639 TYMSOSQ8TAI1 123 aa11.26□□□□□ -0.61
PKD1-230ENST00000565639 A0A087WVE0 104 aa11.25□□□□□ -0.61
PKD1-230ENST00000565639 DSCR10P59022 87 aa11.24□□□□□ -0.61
PKD1-230ENST00000565639 RYR1P21817 5038 aa11.23□□□□□ -0.61
PKD1-230ENST00000565639 FAM236AA0A1B0GUQ0 79 aa11.23□□□□□ -0.61
PKD1-230ENST00000565639 FAM236BA0A1B0GV22 79 aa11.23□□□□□ -0.61
PKD1-230ENST00000565639 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
PKD1-230ENST00000565639 IGKV4-1P06312 121 aa11.22□□□□□ -0.61
PKD1-230ENST00000565639 J3KT08 172 aa11.21□□□□□ -0.61
PKD1-230ENST00000565639 DEFB116Q30KQ4 102 aa11.21□□□□□ -0.61
PKD1-230ENST00000565639 Q8N9L7 120 aa11.21□□□□□ -0.62
PKD1-230ENST00000565639 Q96NJ1 140 aa11.21□□□□□ -0.62
PKD1-230ENST00000565639 Q5XG85 94 aa11.19□□□□□ -0.62
PKD1-230ENST00000565639 ASB16-AS1Q495Z4 193 aa11.18□□□□□ -0.62
PKD1-230ENST00000565639 PKHD1L1Q86WI1 4243 aa11.18□□□□□ -0.62
PKD1-230ENST00000565639 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
PKD1-230ENST00000565639 Q8N1X5 172 aa11.17□□□□□ -0.62
PKD1-230ENST00000565639 K7EQZ3 153 aa11.16□□□□□ -0.62
PKD1-230ENST00000565639 A8MWP4 228 aa11.15□□□□□ -0.62
PKD1-230ENST00000565639 SPINK1P00995 79 aa11.15□□□□□ -0.62
PKD1-230ENST00000565639 SPAG11AQ6PDA7 123 aa11.14□□□□□ -0.63
PKD1-230ENST00000565639 LIMD2Q9BT23 127 aa11.14□□□□□ -0.63
PKD1-230ENST00000565639 KIAA1109Q2LD37 5005 aa11.13□□□□□ -0.63
PKD1-230ENST00000565639 LINC00304Q8N9R0 145 aa11.13□□□□□ -0.63
PKD1-230ENST00000565639 KRTAP17-1Q9BYP8 105 aa11.13□□□□□ -0.63
PKD1-230ENST00000565639 PRR15Q8IV56 129 aa11.11□□□□□ -0.63
PKD1-230ENST00000565639 ATOX1O00244 68 aa11.1□□□□□ -0.63
PKD1-230ENST00000565639 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
PKD1-230ENST00000565639 NDUFB1O75438 58 aa11.1□□□□□ -0.63
PKD1-230ENST00000565639 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
PKD1-230ENST00000565639 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
PKD1-230ENST00000565639 HCG22E2RYF7 251 aa11.04□□□□□ -0.64
PKD1-230ENST00000565639 A0A1B0GVX0 72 aa11.02□□□□□ -0.65
PKD1-230ENST00000565639 KRTAP10-8P60410 259 aa11.01□□□□□ -0.65
PKD1-230ENST00000565639 SMIM20Q8N5G0 67 aa10.99□□□□□ -0.65
PKD1-230ENST00000565639 IGHV6-1A0A0B4J1U7 121 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms